RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 KPNA5O15131 536 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 MAP3K7O43318 606 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 HCRTR1O43613 425 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 USP1O94782 785 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 HAUS5O94927 633 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 ESR1P03372 595 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 RPN2P04844 631 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 CTSBP07858 339 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 ABHD2P08910 425 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 GSTA2P09210 222 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 FAM87AP0C7U9 286 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 ERVK-10P10266 1014 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 CD9P21926 228 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 PKLRP30613 574 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 SLC1A2P43004 574 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 MPP1Q00013 466 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 MAP7Q14244 749 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 ERV3-1Q14264 604 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 ZIC1Q15915 447 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 UAP1Q16222 522 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-221ENST00000477561 KYNUQ16719 465 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 LONRF1Q17RB8 773 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 DEFB109BQ30KR1 87 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 HSP90AA5PQ58FG0 334 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 ACSBG2Q5FVE4 666 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 PLEKHS1Q5SXH7 462 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 RNF187Q5TA31 235 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-221ENST00000477561 TTC23LQ6PF05 361 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 UNC5DQ6UXZ4 953 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 BPHLQ86WA6 291 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-221ENST00000477561 IGDCC3Q8IVU1 814 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 DCUN1D3Q8IWE4 304 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 PALM2Q8IXS6 379 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 CARFQ8N187 725 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 ZNF843Q8N446 348 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 ZBTB2Q8N680 514 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 LINC01555Q8NAE3 123 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 LSM14AQ8ND56 463 aaKnown RBP7.99□□□□□ -1.13
HDAC6-221ENST00000477561 FLVCR1-AS1Q8TAF5 88 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 CT55Q8WUE5 264 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 STARD8Q92502 1023 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 MR1Q95460 341 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 SLC30A3Q99726 388 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 NAT9Q9BTE0 207 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 MENTQ9BUN1 341 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 PITPNM3Q9BZ71 974 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 ROPN1BQ9BZX4 212 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-221ENST00000477561 SPRTNQ9H040 489 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-221ENST00000477561 PPCSQ9HAB8 311 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 ROPN1Q9HAT0 212 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-221ENST00000477561 FANCEQ9HB96 536 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 LHX9Q9NQ69 397 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 IARS2Q9NSE4 1012 aaKnown RBP7.99□□□□□ -1.13
HDAC6-221ENST00000477561 NINJ2Q9NZG7 142 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 OR6C2Q9NZP2 312 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 SLC39A10Q9ULF5 831 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 A0A0J9YY10 115 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 H3BMM5 538 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 TERTO14746 1132 aaKnown RBP7.98□□□□□ -1.13
HDAC6-221ENST00000477561 RASGRF2O14827 1237 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 KALRNO60229 2985 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 KDM1AO60341 852 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 CPNE3O75131 537 aaKnown RBP7.98□□□□□ -1.13
HDAC6-221ENST00000477561 C1orf105O95561 183 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 ACSL3O95573 720 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 MT-ND3P03897 115 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 ITGB2P05107 769 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 FURINP09958 794 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 MYZAPP0CAP1 466 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 PGAM1P18669 254 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 CYP2A7P20853 494 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 OAS2P29728 719 aaKnown RBP7.98□□□□□ -1.13
HDAC6-221ENST00000477561 RAB28P51157 221 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 RPS18P62269 152 aaKnown RBP7.98□□□□□ -1.13
HDAC6-221ENST00000477561 C19orf57Q0VDD7 668 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 CDC20Q12834 499 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 DNASE1L3Q13609 305 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 SLC29A2Q14542 456 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 CRYMQ14894 314 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 SF1Q15637 639 aaKnown RBP7.98□□□□□ -1.13
HDAC6-221ENST00000477561 KLHL38Q2WGJ6 581 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 CEP85LQ5SZL2 805 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 ARMC3Q5W041 872 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 LCN10Q6JVE6 187 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 ZNF549Q6P9A3 640 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 BORAQ6PGQ7 559 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 KCNMB4Q86W47 210 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 C19orf47Q8N9M1 422 aaKnown RBP7.98□□□□□ -1.13
HDAC6-221ENST00000477561 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.98□□□□□ -1.13
HDAC6-221ENST00000477561 FBXO36Q8NEA4 188 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 N4BP2L2Q92802 583 aaPredicted RBP7.98□□□□□ -1.13
HDAC6-221ENST00000477561 RAD51AP1Q96B01 352 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 CLIP3Q96DZ5 547 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 MED8Q96G25 268 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 WBP1Q96G27 269 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 CFAP36Q96G28 342 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 FOPNLQ96NB1 174 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 FCRL4Q96PJ5 515 aa7.98□□□□□ -1.13
HDAC6-221ENST00000477561 EBNA1BP2Q99848 306 aaKnown RBP7.98□□□□□ -1.13
HDAC6-221ENST00000477561 EFHD1Q9BUP0 239 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms