RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 GABRA4P48169 554 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 ARL4DP49703 201 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 ATP1A2P50993 1020 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 ADARP55265 1226 aaKnown RBP17.04■□□□□ 0.32
PTPN7-209ENST00000477554 GPX6P59796 221 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 THOC5Q13769 683 aaKnown RBP17.04■□□□□ 0.32
PTPN7-209ENST00000477554 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.04■□□□□ 0.32
PTPN7-209ENST00000477554 RBM20Q5T481 1227 aaKnown RBP17.04■□□□□ 0.32
PTPN7-209ENST00000477554 C6orf15Q6UXA7 325 aaPredicted RBP17.04■□□□□ 0.32
PTPN7-209ENST00000477554 CAPN12Q6ZSI9 719 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 GABPB2Q8TAK5 448 aaPredicted RBP17.04■□□□□ 0.32
PTPN7-209ENST00000477554 ANKRD7Q92527 254 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 PANX3Q96QZ0 392 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 TCF12Q99081 682 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 ZPBPQ9BS86 351 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 POLG2Q9UHN1 485 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 FBXO5Q9UKT4 447 aa17.04■□□□□ 0.32
PTPN7-209ENST00000477554 A0A087WUV0 522 aaPredicted RBP17.03■□□□□ 0.32
PTPN7-209ENST00000477554 ARHGEF33A8MVX0 844 aa17.03■□□□□ 0.32
PTPN7-209ENST00000477554 ISM1B1AKI9 464 aa17.03■□□□□ 0.32
PTPN7-209ENST00000477554 TMEM150CB9EJG8 249 aa17.03■□□□□ 0.32
PTPN7-209ENST00000477554 ATXN8OSP0DMR3 200 aa17.03■□□□□ 0.32
PTPN7-209ENST00000477554 RPS18P62269 152 aaKnown RBP17.03■□□□□ 0.32
PTPN7-209ENST00000477554 PLOD1Q02809 727 aaPredicted RBP17.03■□□□□ 0.32
PTPN7-209ENST00000477554 GPS2Q13227 327 aa17.03■□□□□ 0.32
PTPN7-209ENST00000477554 SLC29A2Q14542 456 aa17.03■□□□□ 0.32
PTPN7-209ENST00000477554 TMED2Q15363 201 aa17.03■□□□□ 0.32
PTPN7-209ENST00000477554 KLHL38Q2WGJ6 581 aa17.03■□□□□ 0.32
PTPN7-209ENST00000477554 PLEKHS1Q5SXH7 462 aa17.03■□□□□ 0.32
PTPN7-209ENST00000477554 RNF187Q5TA31 235 aaPredicted RBP17.03■□□□□ 0.32
PTPN7-209ENST00000477554 KMT5CQ86Y97 462 aa17.03■□□□□ 0.32
PTPN7-209ENST00000477554 DCUN1D3Q8IWE4 304 aa17.03■□□□□ 0.32
PTPN7-209ENST00000477554 ZBTB2Q8N680 514 aa17.03■□□□□ 0.32
PTPN7-209ENST00000477554 SLC39A7Q92504 469 aa17.03■□□□□ 0.32
PTPN7-209ENST00000477554 GPR21Q99679 349 aa17.03■□□□□ 0.32
PTPN7-209ENST00000477554 TSSK1BQ9BXA7 367 aa17.03■□□□□ 0.32
PTPN7-209ENST00000477554 FUT8Q9BYC5 575 aa17.03■□□□□ 0.32
PTPN7-209ENST00000477554 GPN2Q9H9Y4 310 aaPredicted RBP17.03■□□□□ 0.32
PTPN7-209ENST00000477554 PDE7BQ9NP56 450 aa17.03■□□□□ 0.32
PTPN7-209ENST00000477554 INTS10Q9NVR2 710 aaKnown RBP17.03■□□□□ 0.32
PTPN7-209ENST00000477554 H3BMH7 237 aa17.02■□□□□ 0.31
PTPN7-209ENST00000477554 PRICKLE3O43900 615 aaPredicted RBP17.02■□□□□ 0.31
PTPN7-209ENST00000477554 MATN4O95460 622 aa17.02■□□□□ 0.31
PTPN7-209ENST00000477554 CD9P21926 228 aa17.02■□□□□ 0.31
PTPN7-209ENST00000477554 MAP4P27816 1152 aaKnown RBP17.02■□□□□ 0.31
PTPN7-209ENST00000477554 OAS2P29728 719 aaKnown RBP17.02■□□□□ 0.31
PTPN7-209ENST00000477554 DLSTP36957 453 aa17.02■□□□□ 0.31
PTPN7-209ENST00000477554 RAB28P51157 221 aa17.02■□□□□ 0.31
PTPN7-209ENST00000477554 CDKN2DP55273 166 aa17.02■□□□□ 0.31
PTPN7-209ENST00000477554 FOXL2P58012 376 aa17.02■□□□□ 0.31
PTPN7-209ENST00000477554 ACY1Q03154 408 aa17.02■□□□□ 0.31
PTPN7-209ENST00000477554 ABHD18Q0P651 414 aa17.02■□□□□ 0.31
PTPN7-209ENST00000477554 UAP1Q16222 522 aaPredicted RBP17.02■□□□□ 0.31
PTPN7-209ENST00000477554 TBR1Q16650 682 aa17.02■□□□□ 0.31
PTPN7-209ENST00000477554 UNC5DQ6UXZ4 953 aa17.02■□□□□ 0.31
PTPN7-209ENST00000477554 C19orf47Q8N9M1 422 aaKnown RBP17.02■□□□□ 0.31
PTPN7-209ENST00000477554 C2CD4AQ8NCU7 369 aaPredicted RBP17.02■□□□□ 0.31
PTPN7-209ENST00000477554 CD200R1Q8TD46 325 aa17.02■□□□□ 0.31
PTPN7-209ENST00000477554 CT55Q8WUE5 264 aa17.02■□□□□ 0.31
PTPN7-209ENST00000477554 CDKL2Q92772 493 aa17.02■□□□□ 0.31
PTPN7-209ENST00000477554 CERS2Q96G23 380 aa17.02■□□□□ 0.31
PTPN7-209ENST00000477554 CCDC77Q9BR77 488 aa17.02■□□□□ 0.31
PTPN7-209ENST00000477554 SPRTNQ9H040 489 aaPredicted RBP17.02■□□□□ 0.31
PTPN7-209ENST00000477554 SYNPO2LQ9H987 977 aa17.02■□□□□ 0.31
PTPN7-209ENST00000477554 MOCS1Q9NZB8 636 aa17.02■□□□□ 0.31
PTPN7-209ENST00000477554 OR6C2Q9NZP2 312 aa17.02■□□□□ 0.31
PTPN7-209ENST00000477554 PCSK5Q92824 1860 aa17.02■□□□□ 0.31
PTPN7-209ENST00000477554 A0A1W2PPV9 198 aa17.01■□□□□ 0.31
PTPN7-209ENST00000477554 TCRBV9S1A1TA0A576 114 aa17.01■□□□□ 0.31
PTPN7-209ENST00000477554 RASGRF2O14827 1237 aa17.01■□□□□ 0.31
PTPN7-209ENST00000477554 SCRG1O75711 98 aa17.01■□□□□ 0.31
PTPN7-209ENST00000477554 AHSGP02765 367 aa17.01■□□□□ 0.31
PTPN7-209ENST00000477554 MAGP20916 626 aa17.01■□□□□ 0.31
PTPN7-209ENST00000477554 GRIA3P42263 894 aa17.01■□□□□ 0.31
PTPN7-209ENST00000477554 NFKB2Q00653 900 aa17.01■□□□□ 0.31
PTPN7-209ENST00000477554 CYHR1Q6ZMK1 362 aa17.01■□□□□ 0.31
PTPN7-209ENST00000477554 TMEM126BQ8IUX1 230 aa17.01■□□□□ 0.31
PTPN7-209ENST00000477554 CPNE9Q8IYJ1 553 aa17.01■□□□□ 0.31
PTPN7-209ENST00000477554 CALML6Q8TD86 181 aa17.01■□□□□ 0.31
PTPN7-209ENST00000477554 FBF1Q8TES7 1133 aa17.01■□□□□ 0.31
PTPN7-209ENST00000477554 AARSD1Q9BTE6 412 aaKnown RBP17.01■□□□□ 0.31
PTPN7-209ENST00000477554 EPB41L4BQ9H329 900 aa17.01■□□□□ 0.31
PTPN7-209ENST00000477554 PPANQ9NQ55 473 aaKnown RBP17.01■□□□□ 0.31
PTPN7-209ENST00000477554 LHX9Q9NQ69 397 aa17.01■□□□□ 0.31
PTPN7-209ENST00000477554 LATS2Q9NRM7 1088 aa17.01■□□□□ 0.31
PTPN7-209ENST00000477554 PSAT1Q9Y617 370 aa17.01■□□□□ 0.31
PTPN7-209ENST00000477554 A0A0J9YY10 115 aa17■□□□□ 0.31
PTPN7-209ENST00000477554 ERVH48-1M5A8F1 160 aa17■□□□□ 0.31
PTPN7-209ENST00000477554 NUDT17P0C025 328 aa17■□□□□ 0.31
PTPN7-209ENST00000477554 FAM87AP0C7U9 286 aa17■□□□□ 0.31
PTPN7-209ENST00000477554 MGAT5Q09328 741 aa17■□□□□ 0.31
PTPN7-209ENST00000477554 TAF1BQ53T94 588 aaPredicted RBP17■□□□□ 0.31
PTPN7-209ENST00000477554 FCRL6Q6DN72 434 aa17■□□□□ 0.31
PTPN7-209ENST00000477554 HDXQ7Z353 690 aa17■□□□□ 0.31
PTPN7-209ENST00000477554 PIWIL4Q7Z3Z4 852 aaKnown RBP17■□□□□ 0.31
PTPN7-209ENST00000477554 LMNTD2Q8IXW0 634 aa17■□□□□ 0.31
PTPN7-209ENST00000477554 DTWD1Q8N5C7 304 aa17■□□□□ 0.31
PTPN7-209ENST00000477554 ESX1Q8N693 406 aa17■□□□□ 0.31
PTPN7-209ENST00000477554 PPFIBP2Q8ND30 876 aa17■□□□□ 0.31
PTPN7-209ENST00000477554 OR2L8Q8NGY9 312 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms