RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 LPCAT2Q7L5N7 544 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 L3MBTL4Q8NA19 623 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 PNPT1Q8TCS8 783 aaKnown RBP16.03■□□□□ 0.16
TMEM53-208ENST00000476724 MYLIPQ8WY64 445 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 ZDHHC6Q9H6R6 413 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 DNAJB9Q9UBS3 223 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 ZNHIT2Q9UHR6 403 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 ADGRE2Q9UHX3 823 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 INVSQ9Y283 1065 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 MAN2B2Q9Y2E5 1009 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 V9GYQ6 96 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 UPK1AO00322 258 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 BNIP3LO60238 219 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 PDYNP01213 254 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 C1SP09871 688 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 EPORP19235 508 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 CYP2A7P20853 494 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 VIPR2P41587 438 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 HNRNPFP52597 415 aaKnown RBP16.03■□□□□ 0.16
TMEM53-208ENST00000476724 CDH15P55291 814 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 ZNF33BQ06732 778 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 EPS8Q12929 822 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 DAG1Q14118 895 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 BOP1Q14137 746 aaKnown RBP16.03■□□□□ 0.16
TMEM53-208ENST00000476724 LRIF1Q5T3J3 769 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 MBOAT1Q6ZNC8 495 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 DPY19L3Q6ZPD9 716 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 NAT16Q8N8M0 369 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 FIG4Q92562 907 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 TMBIM1Q969X1 311 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 TMIGD2Q96BF3 282 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 CMTM7Q96FZ5 175 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 FBXL20Q96IG2 436 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 ACPTQ9BZG2 426 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 ELOVL6Q9H5J4 265 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 IGFLR1Q9H665 355 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 PCDHGA11Q9Y5H2 935 aa16.03■□□□□ 0.16
TMEM53-208ENST00000476724 A0A096LPI6 279 aa16.02■□□□□ 0.15
TMEM53-208ENST00000476724 TRBV5-3A0A0A0MS03 114 aa16.02■□□□□ 0.15
TMEM53-208ENST00000476724 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.02■□□□□ 0.15
TMEM53-208ENST00000476724 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.02■□□□□ 0.15
TMEM53-208ENST00000476724 CFAP99D6REC4 459 aa16.02■□□□□ 0.15
TMEM53-208ENST00000476724 GFYI3L273 518 aa16.02■□□□□ 0.15
TMEM53-208ENST00000476724 SEC24DO94855 1032 aaPredicted RBP16.02■□□□□ 0.15
TMEM53-208ENST00000476724 SNAP29O95721 258 aa16.02■□□□□ 0.15
TMEM53-208ENST00000476724 MT-ND1P03886 318 aa16.02■□□□□ 0.15
TMEM53-208ENST00000476724 UGT2B4P06133 528 aa16.02■□□□□ 0.15
TMEM53-208ENST00000476724 RETP07949 1114 aa16.02■□□□□ 0.15
TMEM53-208ENST00000476724 CYP2A6P11509 494 aaPredicted RBP16.02■□□□□ 0.15
TMEM53-208ENST00000476724 IL1RNP18510 177 aa16.02■□□□□ 0.15
TMEM53-208ENST00000476724 S100A3P33764 101 aa16.02■□□□□ 0.15
TMEM53-208ENST00000476724 SLC6A12P48065 614 aa16.02■□□□□ 0.15
TMEM53-208ENST00000476724 PLIN5Q00G26 463 aa16.02■□□□□ 0.15
TMEM53-208ENST00000476724 HSPA14Q0VDF9 509 aa16.02■□□□□ 0.15
TMEM53-208ENST00000476724 DMC1Q14565 340 aa16.02■□□□□ 0.15
TMEM53-208ENST00000476724 MYBPC3Q14896 1274 aa16.02■□□□□ 0.15
TMEM53-208ENST00000476724 CCNYL2Q5T2Q4 361 aa16.02■□□□□ 0.15
TMEM53-208ENST00000476724 ZDHHC13Q8IUH4 622 aa16.02■□□□□ 0.15
TMEM53-208ENST00000476724 MCOLN3Q8TDD5 553 aa16.02■□□□□ 0.15
TMEM53-208ENST00000476724 NUDT8Q8WV74 236 aa16.02■□□□□ 0.15
TMEM53-208ENST00000476724 SDCCAG3Q96C92 435 aa16.02■□□□□ 0.15
TMEM53-208ENST00000476724 ITCHQ96J02 903 aa16.02■□□□□ 0.15
TMEM53-208ENST00000476724 SLC25A37Q9NYZ2 338 aa16.02■□□□□ 0.15
TMEM53-208ENST00000476724 B4GALT6Q9UBX8 382 aa16.02■□□□□ 0.15
TMEM53-208ENST00000476724 KCNE1BA0A087WTH5 132 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 FAM220BPB1ANY3 271 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 WASH3PC4AMC7 463 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 TCF3P15923 654 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 MTHFRP42898 656 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 SEMG2Q02383 582 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 PYCR3Q53H96 274 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 BRAT1Q6PJG6 821 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 TBPL2Q6SJ96 375 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 GDPD4Q6W3E5 623 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 MSANTD1Q6ZTZ1 278 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 MSRB3Q8IXL7 192 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 MICU2Q8IYU8 434 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 TMEM132CQ8N3T6 1108 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 SVOPLQ8N434 492 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 KRTCAP2Q8N6L1 136 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 TESCQ96BS2 214 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 MTFMTQ96DP5 389 aaKnown RBP16.01■□□□□ 0.15
TMEM53-208ENST00000476724 AURKBQ96GD4 344 aaPredicted RBP16.01■□□□□ 0.15
TMEM53-208ENST00000476724 MAGIXQ9H6Y5 334 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 KAT8Q9H7Z6 458 aaKnown RBP16.01■□□□□ 0.15
TMEM53-208ENST00000476724 RAD18Q9NS91 495 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 TBC1D14Q9P2M4 693 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 LIMD1Q9UGP4 676 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 SZT2Q5T011 3432 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 C16orf96A6NNT2 1141 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 CXCR6O00574 342 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 AP2A2O94973 939 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 ALPLP05186 524 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 PABPC1P11940 636 aaKnown RBP16.01■□□□□ 0.15
TMEM53-208ENST00000476724 TCEAL5Q5H9L2 206 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 OTUD3Q5T2D3 398 aaPredicted RBP16.01■□□□□ 0.15
TMEM53-208ENST00000476724 TMEM215Q68D42 235 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 TMEM214Q6NUQ4 689 aaKnown RBP16.01■□□□□ 0.15
TMEM53-208ENST00000476724 CLEC4FQ8N1N0 589 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 BEND7Q8N7W2 519 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms