RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	NAA35	Q5VZE5	725 aa		4.55	□□□□□ -1.68
PRKD3-208	ENST00000475912	ZNF852	Q6ZMS4	543 aa		4.55	□□□□□ -1.68
PRKD3-208	ENST00000475912	FAM43B	Q6ZT52	329 aa	Predicted RBP	4.55	□□□□□ -1.68
PRKD3-208	ENST00000475912	TBC1D10C	Q8IV04	446 aa		4.55	□□□□□ -1.68
PRKD3-208	ENST00000475912	CIART	Q8N365	385 aa	Predicted RBP	4.55	□□□□□ -1.68
PRKD3-208	ENST00000475912	OR2AK2	Q8NG84	335 aa		4.55	□□□□□ -1.68
PRKD3-208	ENST00000475912	OR13A1	Q8NGR1	328 aa		4.55	□□□□□ -1.68
PRKD3-208	ENST00000475912	BBS10	Q8TAM1	723 aa		4.55	□□□□□ -1.68
PRKD3-208	ENST00000475912	ZCCHC10	Q8TBK6	192 aa		4.55	□□□□□ -1.68
PRKD3-208	ENST00000475912	DUSP19	Q8WTR2	217 aa		4.55	□□□□□ -1.68
PRKD3-208	ENST00000475912	SLC20A1	Q8WUM9	679 aa		4.55	□□□□□ -1.68
PRKD3-208	ENST00000475912	UCMA	Q8WVF2	138 aa		4.55	□□□□□ -1.68
PRKD3-208	ENST00000475912	MRPL9	Q9BYD2	267 aa	Known RBP	4.55	□□□□□ -1.68
PRKD3-208	ENST00000475912	NDST4	Q9H3R1	872 aa		4.55	□□□□□ -1.68
PRKD3-208	ENST00000475912	PLEKHA4	Q9H4M7	779 aa		4.55	□□□□□ -1.68
PRKD3-208	ENST00000475912	PCDH9	Q9HC56	1237 aa		4.55	□□□□□ -1.68
PRKD3-208	ENST00000475912	OLA1	Q9NTK5	396 aa	Known RBP	4.55	□□□□□ -1.68
PRKD3-208	ENST00000475912	TBC1D13	Q9NVG8	400 aa		4.55	□□□□□ -1.68
PRKD3-208	ENST00000475912	C2orf42	Q9NWW7	574 aa		4.55	□□□□□ -1.68
PRKD3-208	ENST00000475912	AASS	Q9UDR5	926 aa		4.55	□□□□□ -1.68
PRKD3-208	ENST00000475912	KLK13	Q9UKR3	277 aa		4.55	□□□□□ -1.68
PRKD3-208	ENST00000475912	CDH7	Q9ULB5	785 aa		4.55	□□□□□ -1.68
PRKD3-208	ENST00000475912	NDRG2	Q9UN36	371 aa	Known RBP	4.55	□□□□□ -1.68
PRKD3-208	ENST00000475912	C16orf97	H3BN30	126 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	P2RY10	O00398	339 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	C22orf31	O95567	290 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	BDNF	P23560	247 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	MAN1A1	P33908	653 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	CCR3	P51677	355 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	CLCNKA	P51800	687 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	CRYBB1	P53674	252 aa	Predicted RBP	4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	SORD	Q00796	357 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	TST	Q16762	297 aa	Known RBP	4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	PRICKLE4	Q2TBC4	344 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	IRAK1BP1	Q5VVH5	260 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	ZNF449	Q6P9G9	518 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	GFRAL	Q6UXV0	394 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	QSOX2	Q6ZRP7	698 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	PLPPR4	Q7Z2D5	763 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	DSG4	Q86SJ6	1040 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	LONP2	Q86WA8	852 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	TMEM219	Q86XT9	240 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	ARMC8	Q8IUR7	673 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	SPATA6L	Q8N4H0	392 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	ITFG1	Q8TB96	612 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	LRRC8C	Q8TDW0	803 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	FGF13	Q92913	245 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	C7orf26	Q96N11	449 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	PLA2G2F	Q9BZM2	168 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	AZI2	Q9H6S1	392 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	PPP1R3E	Q9H7J1	279 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	KAT14	Q9H8E8	782 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	HINT3	Q9NQE9	182 aa	Known RBP	4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	MRPL17	Q9NRX2	175 aa	Known RBP	4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	ZFP57	Q9NU63	452 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	POU2F3	Q9UKI9	436 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	A4GNT	Q9UNA3	340 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	NEUROG3	Q9Y4Z2	214 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	SCIN	Q9Y6U3	715 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	MYH15	Q9Y2K3	1946 aa		4.54	□□□□□ -1.68
PRKD3-208	ENST00000475912	ZNF462	Q96JM2	2506 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	MEIS2	O14770	477 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	CYTH3	O43739	400 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	CSDE1	O75534	798 aa	Known RBP	4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	DDHD2	O94830	711 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	ATP1A1	P05023	1023 aa	Known RBP	4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	ITGA2	P17301	1181 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	S1PR1	P21453	382 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	PAFAH1B1	P43034	410 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	CXCL12	P48061	93 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	HNRNPH2	P55795	449 aa	Known RBP	4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	PHEX	P78562	749 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	NAE1	Q13564	534 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	RBM39	Q14498	530 aa	Known RBP	4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	ALX1	Q15699	326 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	ACCSL	Q4AC99	568 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	KCNT1	Q5JUK3	1230 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	FAM69A	Q5T7M9	428 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	KCTD18	Q6PI47	426 aa	Predicted RBP	4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912		Q6ZS52	159 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	MARK2	Q7KZI7	788 aa	Known RBP	4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	TRMT1L	Q7Z2T5	733 aa	Known RBP	4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	R3HCC1L	Q7Z5L2	792 aa	Known RBP	4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	RNF168	Q8IYW5	571 aa	Predicted RBP	4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	KLHL29	Q96CT2	875 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	B3GALT6	Q96L58	329 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	HNRNPAB	Q99729	332 aa	Known RBP	4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	H2AFJ	Q9BTM1	129 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	LRRCC1	Q9C099	1032 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	LMAN1L	Q9HAT1	526 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	MMP25	Q9NPA2	562 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	KLHL1	Q9NR64	748 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	BLOC1S4	Q9NUP1	217 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	ABCF3	Q9NUQ8	709 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	MARCH5	Q9NX47	278 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	MAD2L2	Q9UI95	211 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	TTC7A	Q9ULT0	858 aa	Predicted RBP	4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	NAALADL1	Q9UQQ1	740 aa		4.53	□□□□□ -1.68
PRKD3-208	ENST00000475912	AMDHD2	Q9Y303	409 aa		4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms