RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 DBN1Q16643 649 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 ZNF658BQ4V348 819 aaPredicted RBP15.19■□□□□ 0.02
CPSF3-203ENST00000475482 ZNF789Q5FWF6 425 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 SNAP47Q5SQN1 464 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 DCAF12Q5T6F0 453 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 ANKS6Q68DC2 871 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 KLC3Q6P597 504 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 PRSS42Q7Z5A4 293 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 CMC1Q7Z7K0 106 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 FAM129CQ86XR2 697 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 TRIM42Q8IWZ5 723 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 PIANPQ8IYJ0 282 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 DENND1AQ8TEH3 1009 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 ZFPM2Q8WW38 1151 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 SREK1Q8WXA9 508 aaKnown RBP15.19■□□□□ 0.02
CPSF3-203ENST00000475482 RSC1A1Q92681 617 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 CXorf40BQ96DE9 158 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 COPS8Q99627 209 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 PAIP2Q9BPZ3 127 aaKnown RBP15.19■□□□□ 0.02
CPSF3-203ENST00000475482 ZPBPQ9BS86 351 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 FAM96AQ9H5X1 160 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 CCDC134Q9H6E4 229 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 CAB39LQ9H9S4 337 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 ZDHHC3Q9NYG2 299 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 PILRAQ9UKJ1 303 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 ACSL5Q9ULC5 683 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 PCDHB11Q9Y5F2 797 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 C17orf113A0A1B0GUU1 675 aa15.18■□□□□ 0.02
CPSF3-203ENST00000475482 E5RI56 91 aa15.18■□□□□ 0.02
CPSF3-203ENST00000475482 QSOX1O00391 747 aa15.18■□□□□ 0.02
CPSF3-203ENST00000475482 CAPN5O15484 640 aaPredicted RBP15.18■□□□□ 0.02
CPSF3-203ENST00000475482 SHOX2O60902 331 aaPredicted RBP15.18■□□□□ 0.02
CPSF3-203ENST00000475482 PRB1P04280 392 aa15.18■□□□□ 0.02
CPSF3-203ENST00000475482 MTHFD1P11586 935 aaKnown RBP15.18■□□□□ 0.02
CPSF3-203ENST00000475482 TYRP1P17643 537 aa15.18■□□□□ 0.02
CPSF3-203ENST00000475482 FDXRP22570 491 aa15.18■□□□□ 0.02
CPSF3-203ENST00000475482 FMO4P31512 558 aa15.18■□□□□ 0.02
CPSF3-203ENST00000475482 AKT1P31749 480 aa15.18■□□□□ 0.02
CPSF3-203ENST00000475482 CSRP3P50461 194 aa15.18■□□□□ 0.02
CPSF3-203ENST00000475482 PDAP1Q13442 181 aaKnown RBP15.18■□□□□ 0.02
CPSF3-203ENST00000475482 FAM83EQ2M2I3 478 aa15.18■□□□□ 0.02
CPSF3-203ENST00000475482 MANEAQ5SRI9 462 aa15.18■□□□□ 0.02
CPSF3-203ENST00000475482 RBM20Q5T481 1227 aaKnown RBP15.18■□□□□ 0.02
CPSF3-203ENST00000475482 KIAA1614Q5VZ46 1190 aa15.18■□□□□ 0.02
CPSF3-203ENST00000475482 PTRHD1Q6GMV3 140 aaKnown RBP15.18■□□□□ 0.02
CPSF3-203ENST00000475482 CAPRIN2Q6IMN6 1127 aaKnown RBP15.18■□□□□ 0.02
CPSF3-203ENST00000475482 VASH2Q86V25 355 aa15.18■□□□□ 0.02
CPSF3-203ENST00000475482 CCDC63Q8NA47 563 aa15.18■□□□□ 0.02
CPSF3-203ENST00000475482 KLHL6Q8WZ60 621 aa15.18■□□□□ 0.02
CPSF3-203ENST00000475482 KCNJ9Q92806 393 aa15.18■□□□□ 0.02
CPSF3-203ENST00000475482 DCUN1D1Q96GG9 259 aa15.18■□□□□ 0.02
CPSF3-203ENST00000475482 INSM2Q96T92 566 aaPredicted RBP15.18■□□□□ 0.02
CPSF3-203ENST00000475482 NDNQ99608 321 aa15.18■□□□□ 0.02
CPSF3-203ENST00000475482 TSSK1BQ9BXA7 367 aa15.18■□□□□ 0.02
CPSF3-203ENST00000475482 ZNF768Q9H5H4 540 aaKnown RBP15.18■□□□□ 0.02
CPSF3-203ENST00000475482 GPAMQ9HCL2 828 aa15.18■□□□□ 0.02
CPSF3-203ENST00000475482 TMEM184BQ9Y519 407 aaPredicted RBP15.18■□□□□ 0.02
CPSF3-203ENST00000475482 PCDHGA4Q9Y5G9 962 aa15.18■□□□□ 0.02
CPSF3-203ENST00000475482 TLN1Q9Y490 2541 aaKnown RBP15.18■□□□□ 0.02
CPSF3-203ENST00000475482 ZNF462Q96JM2 2506 aa15.17■□□□□ 0.02
CPSF3-203ENST00000475482 CCDC189A1A4V9 331 aa15.17■□□□□ 0.02
CPSF3-203ENST00000475482 SLC35E2BP0CK96 405 aa15.17■□□□□ 0.02
CPSF3-203ENST00000475482 NEFHP12036 1026 aa15.17■□□□□ 0.02
CPSF3-203ENST00000475482 ATP1B2P14415 290 aaPredicted RBP15.17■□□□□ 0.02
CPSF3-203ENST00000475482 AMD1P17707 334 aa15.17■□□□□ 0.02
CPSF3-203ENST00000475482 LSP1P33241 339 aa15.17■□□□□ 0.02
CPSF3-203ENST00000475482 CDKN1CP49918 316 aaPredicted RBP15.17■□□□□ 0.02
CPSF3-203ENST00000475482 MPP2Q14168 576 aa15.17■□□□□ 0.02
CPSF3-203ENST00000475482 CEACAM20Q6UY09 585 aa15.17■□□□□ 0.02
CPSF3-203ENST00000475482 DET1Q7L5Y6 550 aa15.17■□□□□ 0.02
CPSF3-203ENST00000475482 RDH11Q8TC12 318 aa15.17■□□□□ 0.02
CPSF3-203ENST00000475482 NAT14Q8WUY8 206 aa15.17■□□□□ 0.02
CPSF3-203ENST00000475482 CKAP2Q8WWK9 683 aa15.17■□□□□ 0.02
CPSF3-203ENST00000475482 MAGEB18Q96M61 343 aa15.17■□□□□ 0.02
CPSF3-203ENST00000475482 TGM7Q96PF1 710 aa15.17■□□□□ 0.02
CPSF3-203ENST00000475482 FAM111AQ96PZ2 611 aa15.17■□□□□ 0.02
CPSF3-203ENST00000475482 PANX3Q96QZ0 392 aa15.17■□□□□ 0.02
CPSF3-203ENST00000475482 ZMYND15Q9H091 742 aa15.17■□□□□ 0.02
CPSF3-203ENST00000475482 P2RY12Q9H244 342 aa15.17■□□□□ 0.02
CPSF3-203ENST00000475482 APMAPQ9HDC9 416 aa15.17■□□□□ 0.02
CPSF3-203ENST00000475482 SLC17A7Q9P2U7 560 aa15.17■□□□□ 0.02
CPSF3-203ENST00000475482 KLHL3Q9UH77 587 aa15.17■□□□□ 0.02
CPSF3-203ENST00000475482 PSMD13Q9UNM6 376 aa15.17■□□□□ 0.02
CPSF3-203ENST00000475482 EIF4E1BA6NMX2 242 aaKnown RBP15.16■□□□□ 0.02
CPSF3-203ENST00000475482 BIRC5O15392 142 aa15.16■□□□□ 0.02
CPSF3-203ENST00000475482 PHGDHO43175 533 aaKnown RBP15.16■□□□□ 0.02
CPSF3-203ENST00000475482 KIF1CO43896 1103 aaKnown RBP15.16■□□□□ 0.02
CPSF3-203ENST00000475482 KLHL2O95198 593 aa15.16■□□□□ 0.02
CPSF3-203ENST00000475482 DLGAP3O95886 979 aa15.16■□□□□ 0.02
CPSF3-203ENST00000475482 ITGB2P05107 769 aa15.16■□□□□ 0.02
CPSF3-203ENST00000475482 F7P08709 466 aaPredicted RBP15.16■□□□□ 0.02
CPSF3-203ENST00000475482 LTA4HP09960 611 aaKnown RBP15.16■□□□□ 0.02
CPSF3-203ENST00000475482 OR56A5P0C7T3 313 aa15.16■□□□□ 0.02
CPSF3-203ENST00000475482 PRSS56P0CW18 603 aa15.16■□□□□ 0.02
CPSF3-203ENST00000475482 CHRM3P20309 590 aa15.16■□□□□ 0.02
CPSF3-203ENST00000475482 PPM1FP49593 454 aaPredicted RBP15.16■□□□□ 0.02
CPSF3-203ENST00000475482 LINC00303Q3SY05 128 aa15.16■□□□□ 0.02
CPSF3-203ENST00000475482 ZNF549Q6P9A3 640 aa15.16■□□□□ 0.02
CPSF3-203ENST00000475482 MICALCLQ6ZW33 695 aa15.16■□□□□ 0.02
CPSF3-203ENST00000475482 CEP97Q8IW35 865 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms