RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.43□□□□□ -0.9
CDH23-211ENST00000475158 CLN6Q9NWW5 311 aa9.43□□□□□ -0.9
CDH23-211ENST00000475158 HEMK1Q9Y5R4 338 aaPredicted RBP9.43□□□□□ -0.9
CDH23-211ENST00000475158 CABIN1Q9Y6J0 2220 aa9.43□□□□□ -0.9
CDH23-211ENST00000475158 RASGRP1O95267 797 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 S100A9P06702 114 aaKnown RBP9.42□□□□□ -0.9
CDH23-211ENST00000475158 GPIP06744 558 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 CD68P34810 354 aaPredicted RBP9.42□□□□□ -0.9
CDH23-211ENST00000475158 RPL4P36578 427 aaKnown RBP9.42□□□□□ -0.9
CDH23-211ENST00000475158 GSTM5P46439 218 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 CDKN1CP49918 316 aaPredicted RBP9.42□□□□□ -0.9
CDH23-211ENST00000475158 CDK9P50750 372 aaKnown RBP9.42□□□□□ -0.9
CDH23-211ENST00000475158 NUDT6P53370 316 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 CDKN2DP55273 166 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 DPYSQ14117 519 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 ZSWIM7Q19AV6 140 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 CYP27C1Q4G0S4 372 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 FAM46CQ5VWP2 391 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 HLA-DQA1Q5Y7H0 255 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 MED27Q6P2C8 311 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 GRASPQ7Z6J2 395 aaPredicted RBP9.42□□□□□ -0.9
CDH23-211ENST00000475158 C1orf52Q8N6N3 182 aaKnown RBP9.42□□□□□ -0.9
CDH23-211ENST00000475158 OR8H1Q8NGG4 311 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 C1GALT1C1Q96EU7 318 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 ZBED3Q96IU2 234 aaPredicted RBP9.42□□□□□ -0.9
CDH23-211ENST00000475158 C8orf48Q96LL4 319 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 ASXL3Q9C0F0 2248 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 CPSF4LA6NMK7 179 aaKnown RBP9.42□□□□□ -0.9
CDH23-211ENST00000475158 ZBTB42B2RXF5 422 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 CACNB4O00305 520 aaPredicted RBP9.42□□□□□ -0.9
CDH23-211ENST00000475158 SDHDO14521 159 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 AP3D1O14617 1153 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 PRAMEF11O60813 436 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 TMCC2O75069 709 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 HLA-DQA2P01906 255 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 ITIH1P19827 911 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 PRDX6P30041 224 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 INHBCP55103 352 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 MARCH8Q5T0T0 291 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 R3HCC1LQ7Z5L2 792 aaKnown RBP9.42□□□□□ -0.9
CDH23-211ENST00000475158 C2CD4AQ8NCU7 369 aaPredicted RBP9.42□□□□□ -0.9
CDH23-211ENST00000475158 OR52B6Q8NGF0 335 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 ANKRD49Q8WVL7 239 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 ROPN1LQ96C74 230 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 TIFAQ96CG3 184 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 ASB9Q96DX5 294 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 FBXL20Q96IG2 436 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 SLC2A13Q96QE2 648 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 AIF1LQ9BQI0 150 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 COPS4Q9BT78 406 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 LRRC3Q9BY71 257 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 DIABLOQ9NR28 239 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 POLE4Q9NR33 117 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 ZNF624Q9P2J8 865 aaPredicted RBP9.42□□□□□ -0.9
CDH23-211ENST00000475158 B4GALT6Q9UBX8 382 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 LAMA4Q16363 1823 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 CACNA1SQ13698 1873 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 NAV1Q8NEY1 1877 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 SERPINB7O75635 380 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 PRKACAP17612 351 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 SLC7A1P30825 629 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 UGT2B15P54855 530 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 CEACAM7Q14002 265 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 RNASE12Q5GAN4 147 aaKnown RBP9.42□□□□□ -0.9
CDH23-211ENST00000475158 DENND5AQ6IQ26 1287 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 TIFABQ6ZNK6 161 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 CACTIN-AS1Q8N1I8 211 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 ZNF671Q8TAW3 534 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 SLC45A3Q96JT2 553 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 TRMT61BQ9BVS5 477 aaKnown RBP9.42□□□□□ -0.9
CDH23-211ENST00000475158 OR51B5Q9H339 312 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 DPEP2Q9H4A9 486 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 SERHL2Q9H4I8 314 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 SERHLQ9NQF3 203 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 ITM2CQ9NQX7 267 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 FBXL21Q9UKT6 434 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 MICAL3Q7RTP6 2002 aa9.42□□□□□ -0.9
CDH23-211ENST00000475158 ARPC4-TTLL3A0A0A6YYG9 625 aa9.41□□□□□ -0.9
CDH23-211ENST00000475158 PRNPP04156 253 aa9.41□□□□□ -0.9
CDH23-211ENST00000475158 BMP7P18075 431 aa9.41□□□□□ -0.9
CDH23-211ENST00000475158 IGFBP6P24592 240 aaPredicted RBP9.41□□□□□ -0.9
CDH23-211ENST00000475158 BDKRB1P46663 353 aa9.41□□□□□ -0.9
CDH23-211ENST00000475158 CLK3P49761 638 aaKnown RBP9.41□□□□□ -0.9
CDH23-211ENST00000475158 STX4Q12846 297 aa9.41□□□□□ -0.9
CDH23-211ENST00000475158 BIKQ13323 160 aa9.41□□□□□ -0.9
CDH23-211ENST00000475158 ANXA8L1Q5VT79 327 aa9.41□□□□□ -0.9
CDH23-211ENST00000475158 VITQ6UXI7 678 aa9.41□□□□□ -0.9
CDH23-211ENST00000475158 PHC2Q8IXK0 858 aa9.41□□□□□ -0.9
CDH23-211ENST00000475158 C12orf76Q8N812 135 aaPredicted RBP9.41□□□□□ -0.9
CDH23-211ENST00000475158 C7orf57Q8NEG2 295 aa9.41□□□□□ -0.9
CDH23-211ENST00000475158 ADAMTS15Q8TE58 950 aa9.41□□□□□ -0.9
CDH23-211ENST00000475158 GAB3Q8WWW8 586 aa9.41□□□□□ -0.9
CDH23-211ENST00000475158 LMLNQ96KR4 655 aa9.41□□□□□ -0.9
CDH23-211ENST00000475158 NODALQ96S42 347 aa9.41□□□□□ -0.9
CDH23-211ENST00000475158 DUSP26Q9BV47 211 aa9.41□□□□□ -0.9
CDH23-211ENST00000475158 MTG2Q9H4K7 406 aa9.41□□□□□ -0.9
CDH23-211ENST00000475158 PHPT1Q9NRX4 125 aaPredicted RBP9.41□□□□□ -0.9
CDH23-211ENST00000475158 SEMA3GQ9NS98 782 aa9.41□□□□□ -0.9
CDH23-211ENST00000475158 PTGFRNQ9P2B2 879 aa9.41□□□□□ -0.9
CDH23-211ENST00000475158 GULP1Q9UBP9 304 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms