RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 SVOPQ8N4V2 548 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 RBM15BQ8NDT2 890 aaKnown RBP3.4□□□□□ -1.86
UBR3-208ENST00000474426 TMEM104Q8NE00 496 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 PSMA8Q8TAA3 256 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 PPP4R1Q8TF05 950 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 DUSP19Q8WTR2 217 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 SELENOMQ8WWX9 145 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 C1GALT1C1Q96EU7 318 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 C14orf144Q96I85 54 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 HHIPL1Q96JK4 782 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 FAM210BQ96KR6 192 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 ZNF641Q96N77 438 aaPredicted RBP3.4□□□□□ -1.86
UBR3-208ENST00000474426 CGRRF1Q99675 332 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 PRRT1Q99946 306 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 NAT9Q9BTE0 207 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 ZNF416Q9BWM5 594 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 LRRN3Q9H3W5 708 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 ADAP2Q9NPF8 381 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 TLR9Q9NR96 1032 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 WBP1LQ9NX94 342 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 MRPL15Q9P015 296 aaKnown RBP3.4□□□□□ -1.86
UBR3-208ENST00000474426 SLC17A7Q9P2U7 560 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 GULP1Q9UBP9 304 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 NID2Q14112 1375 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 DHX57Q6P158 1386 aaKnown RBP3.4□□□□□ -1.86
UBR3-208ENST00000474426 ATP10AO60312 1499 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 TCOF1Q13428 1488 aaKnown RBP3.4□□□□□ -1.86
UBR3-208ENST00000474426 SLC5A10A0PJK1 596 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 ELOVL7A1L3X0 281 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 METTL15A6NJ78 407 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 DRGXA6NNA5 263 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 C1QTNF3-AMACRE9PGA6 284 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 SGCEO43556 437 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 ASNA1O43681 348 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 KLK8O60259 260 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 B3GAT3O94766 335 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 OR2C1O95371 312 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 CSF1RP07333 972 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 PSKH1P11801 424 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 ELK4P28324 431 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 CCND3P30281 292 aaPredicted RBP3.4□□□□□ -1.86
UBR3-208ENST00000474426 CD80P33681 288 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 PTGER4P35408 488 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 GJC1P36383 396 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 CCR8P51685 355 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 FGF8P55075 233 aaPredicted RBP3.4□□□□□ -1.86
UBR3-208ENST00000474426 AP3S2P59780 193 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 TNNC1P63316 161 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 SPOCK1Q08629 439 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 SPP2Q13103 211 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 UBAP2LQ14157 1087 aaKnown RBP3.4□□□□□ -1.86
UBR3-208ENST00000474426 FGL2Q14314 439 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 PDCD1Q15116 288 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 SGCBQ16585 318 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 FASTKD1Q53R41 847 aaKnown RBP3.4□□□□□ -1.86
UBR3-208ENST00000474426 C6orf10Q5SRN2 563 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 OR6B2Q6IFH4 312 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 TMEM88Q6PEY1 159 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 TIPARPQ7Z3E1 657 aaKnown RBP3.4□□□□□ -1.86
UBR3-208ENST00000474426 PRSS42Q7Z5A4 293 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 NT5DC3Q86UY8 548 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 TRIM69Q86WT6 500 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 DHFR2Q86XF0 187 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.4□□□□□ -1.86
UBR3-208ENST00000474426 GSPT2Q8IYD1 628 aaKnown RBP3.4□□□□□ -1.86
UBR3-208ENST00000474426 GUF1Q8N442 669 aaKnown RBP3.4□□□□□ -1.86
UBR3-208ENST00000474426 OR2V1Q8NHB1 315 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 SCAMP5Q8TAC9 235 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 DTX3LQ8TDB6 740 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 AENQ8WTP8 325 aaKnown RBP3.4□□□□□ -1.86
UBR3-208ENST00000474426 DNAJC9Q8WXX5 260 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 ZNF333Q96JL9 665 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 MRGPRX4Q96LA9 322 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 RTKNQ9BST9 563 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 TUBB6Q9BUF5 446 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 LRRC3Q9BY71 257 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 TSPAN10Q9H1Z9 355 aaPredicted RBP3.4□□□□□ -1.86
UBR3-208ENST00000474426 CDT1Q9H211 546 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 C10orf88Q9H8K7 445 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 PCDHB16Q9NRJ7 776 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 HCFC1R1Q9NWW0 138 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 CD274Q9NZQ7 290 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 THEGQ9P2T0 379 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 BCS1LQ9Y276 419 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 U3KQV3 271 aa3.4□□□□□ -1.86
UBR3-208ENST00000474426 RAPGEF2Q9Y4G8 1499 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 MROH7Q68CQ1 1323 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 ZFYVE9O95405 1425 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 PLSCR5A0PG75 271 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 ERI2A8K979 691 aaKnown RBP3.4□□□□□ -1.87
UBR3-208ENST00000474426 A8MXQ7 604 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 NPHS1O60500 1241 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 BCAR3O75815 825 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 F10P00742 488 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 CALCAP01258 141 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 SERPING1P05155 500 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 HEXAP06865 529 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 RBP1P09455 135 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 KRT15P19012 456 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 UGT1A6P19224 532 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms