RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 FPR1P21462 350 aa18.17■□□□□ 0.5
ECHDC1-214ENST00000474289 DNAJA1P31689 397 aaKnown RBP18.17■□□□□ 0.5
ECHDC1-214ENST00000474289 HTR2BP41595 481 aa18.17■□□□□ 0.5
ECHDC1-214ENST00000474289 NPRL3Q12980 569 aa18.17■□□□□ 0.5
ECHDC1-214ENST00000474289 DALRD3Q5D0E6 543 aaKnown RBP18.17■□□□□ 0.5
ECHDC1-214ENST00000474289 MARC1Q5VT66 337 aa18.17■□□□□ 0.5
ECHDC1-214ENST00000474289 FAM171A1Q5VUB5 890 aa18.17■□□□□ 0.5
ECHDC1-214ENST00000474289 ATG9BQ674R7 924 aa18.17■□□□□ 0.5
ECHDC1-214ENST00000474289 DEPDC4Q8N2C3 294 aa18.17■□□□□ 0.5
ECHDC1-214ENST00000474289 SETD6Q8TBK2 473 aa18.17■□□□□ 0.5
ECHDC1-214ENST00000474289 IL1RAPQ9NPH3 570 aa18.17■□□□□ 0.5
ECHDC1-214ENST00000474289 SIRT5Q9NXA8 310 aa18.17■□□□□ 0.5
ECHDC1-214ENST00000474289 PSORS1C1Q9UIG5 152 aa18.17■□□□□ 0.5
ECHDC1-214ENST00000474289 TIMM13Q9Y5L4 95 aaPredicted RBP18.17■□□□□ 0.5
ECHDC1-214ENST00000474289 SNX8Q9Y5X2 465 aa18.17■□□□□ 0.5
ECHDC1-214ENST00000474289 hCG_2039718K7EN88 272 aa18.16■□□□□ 0.5
ECHDC1-214ENST00000474289 TSPAN12O95859 305 aa18.16■□□□□ 0.5
ECHDC1-214ENST00000474289 KCNE1P15382 129 aa18.16■□□□□ 0.5
ECHDC1-214ENST00000474289 SMU1Q2TAY7 513 aa18.16■□□□□ 0.5
ECHDC1-214ENST00000474289 FAM214AQ32MH5 1076 aa18.16■□□□□ 0.5
ECHDC1-214ENST00000474289 TRAF7Q6Q0C0 670 aa18.16■□□□□ 0.5
ECHDC1-214ENST00000474289 GPSM1Q86YR5 675 aa18.16■□□□□ 0.5
ECHDC1-214ENST00000474289 EMID1Q96A84 441 aaPredicted RBP18.16■□□□□ 0.5
ECHDC1-214ENST00000474289 CEP19Q96LK0 163 aa18.16■□□□□ 0.5
ECHDC1-214ENST00000474289 KCNS3Q9BQ31 491 aa18.16■□□□□ 0.5
ECHDC1-214ENST00000474289 SP110Q9HB58 689 aa18.16■□□□□ 0.5
ECHDC1-214ENST00000474289 MOSPD1Q9UJG1 213 aa18.16■□□□□ 0.5
ECHDC1-214ENST00000474289 SATB2Q9UPW6 733 aa18.16■□□□□ 0.5
ECHDC1-214ENST00000474289 TRAPPC4Q9Y296 219 aa18.16■□□□□ 0.5
ECHDC1-214ENST00000474289 PCDHGA6Q9Y5G7 932 aa18.16■□□□□ 0.5
ECHDC1-214ENST00000474289 TNS1Q9HBL0 1735 aaKnown RBP18.16■□□□□ 0.5
ECHDC1-214ENST00000474289 LOC285095A0A1B0GVY8 99 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 E9PAM4 449 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 TFECO14948 347 aaPredicted RBP18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 UGT2B17O75795 530 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 MOCS2O96007 188 aaPredicted RBP18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 UBL4AP11441 157 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 SOX6P35712 828 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 CRISP3P54108 245 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 NFE2Q16621 373 aaPredicted RBP18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 TAPT1Q6NXT6 567 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 OR4F6Q8NGB9 312 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 RIPOR3Q96MK2 946 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 TRNT1Q96Q11 434 aaKnown RBP18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 DHRS9Q9BPW9 319 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 PCDHGB2Q9Y5G2 931 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 CYP7B1O75881 506 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 VIPP01282 170 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 TRAPPC2P0DI81 140 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 TRAPPC2BP0DI82 140 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 ADORA3P0DMS8 318 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 HAPLN1P10915 354 aaPredicted RBP18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 HNF4AP41235 474 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 ADCYAP1R1P41586 468 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 RGS6P49758 472 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 CAMK2GQ13555 558 aaPredicted RBP18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 C18orf21Q32NC0 220 aaPredicted RBP18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 ARMC4Q5T2S8 1044 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 Q6ZPB1 254 aaPredicted RBP18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 PAF1Q8N7H5 531 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 ARRDC2Q8TBH0 407 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 SLC7A6Q92536 515 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 HMCESQ96FZ2 354 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 OR52E6Q96RD3 313 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 CPPED1Q9BRF8 314 aaPredicted RBP18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 DPY30Q9C005 99 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 ELP3Q9H9T3 547 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 SAMHD1Q9Y3Z3 626 aaKnown RBP18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 CCL27Q9Y4X3 112 aa18.15■□□□□ 0.5
ECHDC1-214ENST00000474289 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.14■□□□□ 0.5
ECHDC1-214ENST00000474289 SLITRK5O94991 958 aa18.14■□□□□ 0.5
ECHDC1-214ENST00000474289 IL6P05231 212 aa18.14■□□□□ 0.5
ECHDC1-214ENST00000474289 CDK1P06493 297 aa18.14■□□□□ 0.5
ECHDC1-214ENST00000474289 HTR7P34969 479 aa18.14■□□□□ 0.5
ECHDC1-214ENST00000474289 CSNK2BP67870 215 aa18.14■□□□□ 0.5
ECHDC1-214ENST00000474289 ARMCX4Q5H9R4 360 aa18.14■□□□□ 0.5
ECHDC1-214ENST00000474289 CCDC28AQ8IWP9 274 aa18.14■□□□□ 0.5
ECHDC1-214ENST00000474289 NKAPQ8N5F7 415 aaKnown RBP18.14■□□□□ 0.5
ECHDC1-214ENST00000474289 TP53I13Q8NBR0 393 aaPredicted RBP18.14■□□□□ 0.5
ECHDC1-214ENST00000474289 PPTC7Q8NI37 304 aa18.14■□□□□ 0.5
ECHDC1-214ENST00000474289 BEX2Q9BXY8 128 aa18.14■□□□□ 0.5
ECHDC1-214ENST00000474289 STMN3Q9NZ72 180 aa18.14■□□□□ 0.5
ECHDC1-214ENST00000474289 SAMD4AQ9UPU9 718 aaKnown RBP18.14■□□□□ 0.5
ECHDC1-214ENST00000474289 AP3M1Q9Y2T2 418 aa18.14■□□□□ 0.5
ECHDC1-214ENST00000474289 POLR2AP24928 1970 aaKnown RBP18.14■□□□□ 0.49
ECHDC1-214ENST00000474289 COL4A4P53420 1690 aaPredicted RBP18.14■□□□□ 0.49
ECHDC1-214ENST00000474289 KIAA0513O60268 411 aa18.14■□□□□ 0.49
ECHDC1-214ENST00000474289 PTHP01270 115 aa18.14■□□□□ 0.49
ECHDC1-214ENST00000474289 IL7P13232 177 aa18.14■□□□□ 0.49
ECHDC1-214ENST00000474289 TNFSF8P32971 234 aa18.14■□□□□ 0.49
ECHDC1-214ENST00000474289 VLDLRP98155 873 aa18.14■□□□□ 0.49
ECHDC1-214ENST00000474289 GALNT3Q14435 633 aa18.14■□□□□ 0.49
ECHDC1-214ENST00000474289 GPAT3Q53EU6 434 aa18.14■□□□□ 0.49
ECHDC1-214ENST00000474289 XKR4Q5GH76 650 aa18.14■□□□□ 0.49
ECHDC1-214ENST00000474289 FAM20CQ8IXL6 584 aa18.14■□□□□ 0.49
ECHDC1-214ENST00000474289 SIDT2Q8NBJ9 832 aaKnown RBP18.14■□□□□ 0.49
ECHDC1-214ENST00000474289 GGHQ92820 318 aa18.14■□□□□ 0.49
ECHDC1-214ENST00000474289 MYDGFQ969H8 173 aa18.14■□□□□ 0.49
ECHDC1-214ENST00000474289 SMARCD1Q96GM5 515 aa18.14■□□□□ 0.49
ECHDC1-214ENST00000474289 PPP3R2Q96LZ3 170 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms