RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 CMPK1P30085 196 aa13.27□□□□□ -0.29
USF1-205ENST00000473969 PNLIPRP1P54315 467 aa13.27□□□□□ -0.29
USF1-205ENST00000473969 UCNP55089 124 aa13.27□□□□□ -0.29
USF1-205ENST00000473969 TAS2R39P59534 338 aa13.27□□□□□ -0.29
USF1-205ENST00000473969 TIAL1Q01085 375 aaKnown RBP eCLIP13.27□□□□□ -0.29
USF1-205ENST00000473969 CYP2A13Q16696 494 aa13.27□□□□□ -0.29
USF1-205ENST00000473969 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.27□□□□□ -0.29
USF1-205ENST00000473969 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.27□□□□□ -0.29
USF1-205ENST00000473969 THEMIS2Q5TEJ8 643 aa13.27□□□□□ -0.29
USF1-205ENST00000473969 RAPH1Q70E73 1250 aa13.27□□□□□ -0.29
USF1-205ENST00000473969 GPR135Q8IZ08 494 aa13.27□□□□□ -0.29
USF1-205ENST00000473969 IL22RA1Q8N6P7 574 aa13.27□□□□□ -0.29
USF1-205ENST00000473969 HMGCLL1Q8TB92 370 aa13.27□□□□□ -0.29
USF1-205ENST00000473969 HNRNPLLQ8WVV9 542 aaKnown RBP13.27□□□□□ -0.29
USF1-205ENST00000473969 MRRFQ96E11 262 aaKnown RBP13.27□□□□□ -0.29
USF1-205ENST00000473969 FCRL4Q96PJ5 515 aa13.27□□□□□ -0.29
USF1-205ENST00000473969 MENTQ9BUN1 341 aa13.27□□□□□ -0.29
USF1-205ENST00000473969 SLC12A9Q9BXP2 914 aa13.27□□□□□ -0.29
USF1-205ENST00000473969 CDC42EP4Q9H3Q1 356 aaKnown RBP13.27□□□□□ -0.29
USF1-205ENST00000473969 ABCF3Q9NUQ8 709 aa13.27□□□□□ -0.29
USF1-205ENST00000473969 IRAK4Q9NWZ3 460 aa13.27□□□□□ -0.29
USF1-205ENST00000473969 UTP6Q9NYH9 597 aaKnown RBP13.27□□□□□ -0.29
USF1-205ENST00000473969 KIF26BQ2KJY2 2108 aa13.27□□□□□ -0.29
USF1-205ENST00000473969 TMEM150CB9EJG8 249 aa13.26□□□□□ -0.29
USF1-205ENST00000473969 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.26□□□□□ -0.29
USF1-205ENST00000473969 STK17BO94768 372 aa13.26□□□□□ -0.29
USF1-205ENST00000473969 SLC16A8O95907 504 aa13.26□□□□□ -0.29
USF1-205ENST00000473969 MT-ND3P03897 115 aa13.26□□□□□ -0.29
USF1-205ENST00000473969 CCNYL3P0C7X3 344 aa13.26□□□□□ -0.29
USF1-205ENST00000473969 ZNF37AP17032 561 aaPredicted RBP13.26□□□□□ -0.29
USF1-205ENST00000473969 PEBP1P30086 187 aaKnown RBP13.26□□□□□ -0.29
USF1-205ENST00000473969 CLN3Q13286 438 aa13.26□□□□□ -0.29
USF1-205ENST00000473969 GPR19Q15760 415 aa13.26□□□□□ -0.29
USF1-205ENST00000473969 ZC3H12BQ5HYM0 836 aaKnown RBP13.26□□□□□ -0.29
USF1-205ENST00000473969 MANEAQ5SRI9 462 aa13.26□□□□□ -0.29
USF1-205ENST00000473969 TAOK1Q7L7X3 1001 aa13.26□□□□□ -0.29
USF1-205ENST00000473969 TMEM126BQ8IUX1 230 aa13.26□□□□□ -0.29
USF1-205ENST00000473969 SPACA3Q8IXA5 215 aa13.26□□□□□ -0.29
USF1-205ENST00000473969 CACNA2D3Q8IZS8 1091 aa13.26□□□□□ -0.29
USF1-205ENST00000473969 NLGN4XQ8N0W4 816 aa13.26□□□□□ -0.29
USF1-205ENST00000473969 LMNTD1Q8N9Z9 388 aa13.26□□□□□ -0.29
USF1-205ENST00000473969 NLGN4YQ8NFZ3 816 aaPredicted RBP13.26□□□□□ -0.29
USF1-205ENST00000473969 DENND1AQ8TEH3 1009 aa13.26□□□□□ -0.29
USF1-205ENST00000473969 ATL1Q8WXF7 558 aa13.26□□□□□ -0.29
USF1-205ENST00000473969 PMEPA1Q969W9 287 aa13.26□□□□□ -0.29
USF1-205ENST00000473969 ZUFSPQ96AP4 578 aa13.26□□□□□ -0.29
USF1-205ENST00000473969 KIAA1143Q96AT1 154 aaPredicted RBP13.26□□□□□ -0.29
USF1-205ENST00000473969 PDLIM5Q96HC4 596 aaKnown RBP13.26□□□□□ -0.29
USF1-205ENST00000473969 GPR22Q99680 433 aa13.26□□□□□ -0.29
USF1-205ENST00000473969 MIPEPQ99797 713 aa13.26□□□□□ -0.29
USF1-205ENST00000473969 ARL15Q9NXU5 204 aa13.26□□□□□ -0.29
USF1-205ENST00000473969 A0A087WUV0 522 aaPredicted RBP13.25□□□□□ -0.29
USF1-205ENST00000473969 KRT87PA6NCN2 255 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 TARM1B6A8C7 271 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 RAD1O60671 282 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 KIAA0754O94854 1291 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 INHBAP08476 426 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 ENO2P09104 434 aaPredicted RBP13.25□□□□□ -0.29
USF1-205ENST00000473969 MAGP20916 626 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 PGGT1BP53609 377 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 ITGA1P56199 1179 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 AP1S2P56377 157 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 FASTKQ14296 549 aaKnown RBP13.25□□□□□ -0.29
USF1-205ENST00000473969 FIGLAQ6QHK4 219 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 SUSD1Q6UWL2 747 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 C6orf15Q6UXA7 325 aaPredicted RBP13.25□□□□□ -0.29
USF1-205ENST00000473969 FRA10AC1Q70Z53 315 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 TRMT10CQ7L0Y3 403 aaKnown RBP13.25□□□□□ -0.29
USF1-205ENST00000473969 ESX1Q8N693 406 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 ZSCAN1Q8NBB4 408 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 FLVCR1-AS1Q8TAF5 88 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 ZNF480Q8WV37 535 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 ANKRD7Q92527 254 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 ZNF501Q96CX3 271 aaPredicted RBP13.25□□□□□ -0.29
USF1-205ENST00000473969 CCNL2Q96S94 520 aaPredicted RBP13.25□□□□□ -0.29
USF1-205ENST00000473969 EFHD1Q9BUP0 239 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 ACAT2Q9BWD1 397 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 PCBD2Q9H0N5 130 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 CAB39LQ9H9S4 337 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 MRPS30Q9NP92 439 aaKnown RBP13.25□□□□□ -0.29
USF1-205ENST00000473969 CCDC177Q9NQR7 707 aaPredicted RBP13.25□□□□□ -0.29
USF1-205ENST00000473969 CTNNAL1Q9UBT7 734 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 ADAMTS6Q9UKP5 1117 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 PLCL2Q9UPR0 1127 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 PDE10AQ9Y233 779 aa13.25□□□□□ -0.29
USF1-205ENST00000473969 TMEM184BQ9Y519 407 aaPredicted RBP13.25□□□□□ -0.29
USF1-205ENST00000473969 IGF2RP11717 2491 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 E7EQ34 232 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 SCRG1O75711 98 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 FAM155BO75949 473 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 TSPAN12O95859 305 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 MSL3P1P0C860 447 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 ERGP11308 486 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 CCND1P24385 295 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 ITPKBP27987 946 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 CRABP2P29373 138 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 ECHS1P30084 290 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 PMS2P54278 862 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 TMPRSS3P57727 454 aa13.24□□□□□ -0.29
USF1-205ENST00000473969 RAB10P61026 200 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms