RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 UTP6Q9NYH9 597 aaKnown RBP11.99□□□□□ -0.49
DDX56-209ENST00000473924 SEMA5BQ9P283 1151 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 ZNF180Q9UJW8 692 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 ACOT9Q9Y305 439 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 PCDHB11Q9Y5F2 797 aa11.99□□□□□ -0.49
DDX56-209ENST00000473924 A0A087X1B8 175 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 POLR1CO15160 346 aaPredicted RBP11.98□□□□□ -0.49
DDX56-209ENST00000473924 KRT37O76014 449 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 DXOO77932 396 aaKnown RBP11.98□□□□□ -0.49
DDX56-209ENST00000473924 GUCA1CO95843 209 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 TUBBP07437 444 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 EBLN1P0CF75 366 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 SLC35E2BP0CK96 405 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 ERGP11308 486 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 PVRP15151 417 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 IMPA1P29218 277 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 AP1S2P56377 157 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 RAB15P59190 212 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 ERVPABLB-1P60509 514 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 ATP6V0D1P61421 351 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 SH3BP2P78314 561 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 MC2RQ01718 297 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 ACY1Q03154 408 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 KCNAB1Q14722 419 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 TSNQ15631 228 aaKnown RBP11.98□□□□□ -0.49
DDX56-209ENST00000473924 DCAF12Q5T6F0 453 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 EMBQ6PCB8 327 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 IGF2-ASQ6U949 168 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 CEACAM20Q6UY09 585 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 CCDC91Q7Z6B0 441 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 ADAMTSL2Q86TH1 951 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 PPFIBP2Q8ND30 876 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 DCAKDQ8WVC6 231 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 N4BP2L2Q92802 583 aaPredicted RBP11.98□□□□□ -0.49
DDX56-209ENST00000473924 ALKBH8Q96BT7 664 aaKnown RBP11.98□□□□□ -0.49
DDX56-209ENST00000473924 MED8Q96G25 268 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 ZNF578Q96N58 590 aaPredicted RBP11.98□□□□□ -0.49
DDX56-209ENST00000473924 TRAPPC9Q96Q05 1148 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 CTRCQ99895 268 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 EGFL8Q99944 293 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 ACAT2Q9BWD1 397 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 TMEM121BQ9BXQ6 578 aaPredicted RBP11.98□□□□□ -0.49
DDX56-209ENST00000473924 ASPSCR1Q9BZE9 553 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 FBXO8Q9NRD0 319 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 INTS7Q9NVH2 962 aaKnown RBP11.98□□□□□ -0.49
DDX56-209ENST00000473924 STOX2Q9P2F5 926 aaPredicted RBP11.98□□□□□ -0.49
DDX56-209ENST00000473924 IKZF3Q9UKT9 509 aa11.98□□□□□ -0.49
DDX56-209ENST00000473924 NOVA2Q9UNW9 492 aaKnown RBP11.98□□□□□ -0.49
DDX56-209ENST00000473924 A0A096LPK6 155 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 HMX2A2RU54 273 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 TMEM8BA6NDV4 472 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 TRIM49D1C9J1S8 452 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 E7ENX8 843 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 PRAMEF10O60809 474 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 FKBP9O95302 570 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 WISP3O95389 354 aaPredicted RBP11.97□□□□□ -0.49
DDX56-209ENST00000473924 ALDOAP04075 364 aaKnown RBP11.97□□□□□ -0.49
DDX56-209ENST00000473924 C2P06681 752 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 SNRPAP09012 282 aaKnown RBP11.97□□□□□ -0.49
DDX56-209ENST00000473924 LTA4HP09960 611 aaKnown RBP11.97□□□□□ -0.49
DDX56-209ENST00000473924 FOLR1P15328 257 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 CD1DP15813 335 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 MAGP20916 626 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 PSMB5P28074 263 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 CMPK1P30085 196 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 SLC5A2P31639 672 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 TAP2Q03519 686 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 TUBB3Q13509 450 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 TBC1D25Q3MII6 688 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 AGTRAPQ6RW13 159 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 SBSNQ6UWP8 590 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 MBOAT1Q6ZNC8 495 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 FAM20CQ8IXL6 584 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 D2HGDHQ8N465 521 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 BMPERQ8N8U9 685 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 C19orf47Q8N9M1 422 aaKnown RBP11.97□□□□□ -0.49
DDX56-209ENST00000473924 FLVCR1-AS1Q8TAF5 88 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 AENQ8WTP8 325 aaKnown RBP11.97□□□□□ -0.49
DDX56-209ENST00000473924 ATL1Q8WXF7 558 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 ZCCHC14Q8WYQ9 949 aaKnown RBP11.97□□□□□ -0.49
DDX56-209ENST00000473924 TCTN2Q96GX1 697 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 UBXN10Q96LJ8 280 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 TEFMQ96QE5 360 aaKnown RBP11.97□□□□□ -0.49
DDX56-209ENST00000473924 MIPEPQ99797 713 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 DDA1Q9BW61 102 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 TWSG1Q9GZX9 223 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 ATG10Q9H0Y0 220 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 VPS11Q9H270 941 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 EPB41L4BQ9H329 900 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 FANCEQ9HB96 536 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 NMRAL1Q9HBL8 299 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 APMAPQ9HDC9 416 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 ASCL3Q9NQ33 180 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 CCDC177Q9NQR7 707 aaPredicted RBP11.97□□□□□ -0.49
DDX56-209ENST00000473924 FGF21Q9NSA1 209 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 SIDT1Q9NXL6 827 aaKnown RBP11.97□□□□□ -0.49
DDX56-209ENST00000473924 DKK4Q9UBT3 224 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 FETUBQ9UGM5 382 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 TAC3Q9UHF0 121 aa11.97□□□□□ -0.49
DDX56-209ENST00000473924 BTRCQ9Y297 605 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms