RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 NDUFS3O75489 264 aa18.96■□□□□ 0.63
COL9A3-210ENST00000472880 FKBP9O95302 570 aa18.96■□□□□ 0.63
COL9A3-210ENST00000472880 GCGRP47871 477 aa18.96■□□□□ 0.63
COL9A3-210ENST00000472880 CRADDP78560 199 aa18.96■□□□□ 0.63
COL9A3-210ENST00000472880 MRPL49Q13405 166 aaKnown RBP18.96■□□□□ 0.63
COL9A3-210ENST00000472880 GRM7Q14831 915 aa18.96■□□□□ 0.63
COL9A3-210ENST00000472880 TCTE1Q5JU00 501 aa18.96■□□□□ 0.63
COL9A3-210ENST00000472880 FCRL6Q6DN72 434 aa18.96■□□□□ 0.63
COL9A3-210ENST00000472880 FIGLAQ6QHK4 219 aa18.96■□□□□ 0.63
COL9A3-210ENST00000472880 C4orf22Q6V702 233 aa18.96■□□□□ 0.63
COL9A3-210ENST00000472880 OTOAQ7RTW8 1153 aa18.96■□□□□ 0.63
COL9A3-210ENST00000472880 LRRC6Q86X45 466 aa18.96■□□□□ 0.63
COL9A3-210ENST00000472880 TTC29Q8NA56 475 aaPredicted RBP18.96■□□□□ 0.63
COL9A3-210ENST00000472880 RAD51AP1Q96B01 352 aa18.96■□□□□ 0.63
COL9A3-210ENST00000472880 SELENOSQ9BQE4 189 aa18.96■□□□□ 0.63
COL9A3-210ENST00000472880 IL22Q9GZX6 179 aa18.96■□□□□ 0.63
COL9A3-210ENST00000472880 P2RY12Q9H244 342 aa18.96■□□□□ 0.63
COL9A3-210ENST00000472880 ATP13A2Q9NQ11 1180 aa18.96■□□□□ 0.63
COL9A3-210ENST00000472880 SLC22A11Q9NSA0 550 aa18.96■□□□□ 0.63
COL9A3-210ENST00000472880 TREX1Q9NSU2 369 aa18.96■□□□□ 0.63
COL9A3-210ENST00000472880 CUTCQ9NTM9 273 aa18.96■□□□□ 0.63
COL9A3-210ENST00000472880 CUEDC1Q9NWM3 386 aaPredicted RBP18.96■□□□□ 0.63
COL9A3-210ENST00000472880 TTC7AQ9ULT0 858 aaPredicted RBP18.96■□□□□ 0.63
COL9A3-210ENST00000472880 NUP210LQ5VU65 1888 aa18.95■□□□□ 0.62
COL9A3-210ENST00000472880 AGPSO00116 658 aa18.95■□□□□ 0.62
COL9A3-210ENST00000472880 AP3B1O00203 1094 aa18.95■□□□□ 0.62
COL9A3-210ENST00000472880 DSCR3O14972 297 aa18.95■□□□□ 0.62
COL9A3-210ENST00000472880 SEMA7AO75326 666 aa18.95■□□□□ 0.62
COL9A3-210ENST00000472880 GRIA3P42263 894 aa18.95■□□□□ 0.62
COL9A3-210ENST00000472880 BDKRB1P46663 353 aa18.95■□□□□ 0.62
COL9A3-210ENST00000472880 EIF3BP55884 814 aaKnown RBP18.95■□□□□ 0.62
COL9A3-210ENST00000472880 AIMP2Q13155 320 aaKnown RBP18.95■□□□□ 0.62
COL9A3-210ENST00000472880 CCNG2Q16589 344 aa18.95■□□□□ 0.62
COL9A3-210ENST00000472880 PLEKHN1Q494U1 663 aaPredicted RBP18.95■□□□□ 0.62
COL9A3-210ENST00000472880 MEI1Q5TIA1 1274 aa18.95■□□□□ 0.62
COL9A3-210ENST00000472880 YOD1Q5VVQ6 348 aaPredicted RBP18.95■□□□□ 0.62
COL9A3-210ENST00000472880 GSTA5Q7RTV2 222 aa18.95■□□□□ 0.62
COL9A3-210ENST00000472880 NACC2Q96BF6 587 aa18.95■□□□□ 0.62
COL9A3-210ENST00000472880 FOPNLQ96NB1 174 aa18.95■□□□□ 0.62
COL9A3-210ENST00000472880 ZNF552Q9H707 407 aaPredicted RBP18.95■□□□□ 0.62
COL9A3-210ENST00000472880 WDR54Q9H977 334 aa18.95■□□□□ 0.62
COL9A3-210ENST00000472880 BFARQ9NZS9 450 aa18.95■□□□□ 0.62
COL9A3-210ENST00000472880 PLEKHB1Q9UF11 243 aaPredicted RBP18.95■□□□□ 0.62
COL9A3-210ENST00000472880 CDC23Q9UJX2 597 aa18.95■□□□□ 0.62
COL9A3-210ENST00000472880 FAM169AQ9Y6X4 670 aa18.95■□□□□ 0.62
COL9A3-210ENST00000472880 PCM1Q15154 2024 aa18.95■□□□□ 0.62
COL9A3-210ENST00000472880 MASP2O00187 686 aa18.94■□□□□ 0.62
COL9A3-210ENST00000472880 ALBP02768 609 aa18.94■□□□□ 0.62
COL9A3-210ENST00000472880 ITGAXP20702 1163 aa18.94■□□□□ 0.62
COL9A3-210ENST00000472880 RPS3P23396 243 aaKnown RBP eCLIP18.94■□□□□ 0.622e-23■□□□□ 9
COL9A3-210ENST00000472880 MMP11P24347 488 aa18.94■□□□□ 0.62
COL9A3-210ENST00000472880 MCM3P25205 808 aa18.94■□□□□ 0.62
COL9A3-210ENST00000472880 ITGA3P26006 1051 aa18.94■□□□□ 0.62
COL9A3-210ENST00000472880 NMBRP28336 390 aa18.94■□□□□ 0.62
COL9A3-210ENST00000472880 NPY2RP49146 381 aa18.94■□□□□ 0.62
COL9A3-210ENST00000472880 SIX1Q15475 284 aaPredicted RBP18.94■□□□□ 0.62
COL9A3-210ENST00000472880 EIF2S3LQ2VIR3 472 aaKnown RBP18.94■□□□□ 0.62
COL9A3-210ENST00000472880 C4orf17Q53FE4 359 aa18.94■□□□□ 0.62
COL9A3-210ENST00000472880 IGFL3Q6UXB1 125 aa18.94■□□□□ 0.62
COL9A3-210ENST00000472880 OVCH1Q7RTY7 1134 aa18.94■□□□□ 0.62
COL9A3-210ENST00000472880 TMEM151BQ8IW70 566 aa18.94■□□□□ 0.62
COL9A3-210ENST00000472880 ZADH2Q8N4Q0 377 aa18.94■□□□□ 0.62
COL9A3-210ENST00000472880 SNRNP40Q96DI7 357 aaKnown RBP18.94■□□□□ 0.62
COL9A3-210ENST00000472880 MRM3Q9HC36 420 aaKnown RBP18.94■□□□□ 0.62
COL9A3-210ENST00000472880 FBXL4Q9UKA2 621 aa18.94■□□□□ 0.62
COL9A3-210ENST00000472880 NXT1Q9UKK6 140 aaKnown RBP18.94■□□□□ 0.62
COL9A3-210ENST00000472880 RUVBL2Q9Y230 463 aaKnown RBP18.94■□□□□ 0.62
COL9A3-210ENST00000472880 NFS1Q9Y697 457 aa18.94■□□□□ 0.62
COL9A3-210ENST00000472880 CCDC88CQ9P219 2028 aa18.94■□□□□ 0.62
COL9A3-210ENST00000472880 C1orf105O95561 183 aa18.93■□□□□ 0.62
COL9A3-210ENST00000472880 PSMB5P28074 263 aa18.93■□□□□ 0.62
COL9A3-210ENST00000472880 CCNFP41002 786 aa18.93■□□□□ 0.62
COL9A3-210ENST00000472880 SOX8P57073 446 aa18.93■□□□□ 0.62
COL9A3-210ENST00000472880 NR6A1Q15406 480 aa18.93■□□□□ 0.62
COL9A3-210ENST00000472880 NKG7Q16617 165 aa18.93■□□□□ 0.62
COL9A3-210ENST00000472880 IRAK1BP1Q5VVH5 260 aa18.93■□□□□ 0.62
COL9A3-210ENST00000472880 MRNIPQ6NTE8 343 aa18.93■□□□□ 0.62
COL9A3-210ENST00000472880 DRICH1Q6PGQ1 229 aaPredicted RBP18.93■□□□□ 0.62
COL9A3-210ENST00000472880 CNSTQ6PJW8 725 aa18.93■□□□□ 0.62
COL9A3-210ENST00000472880 COX15Q7KZN9 410 aa18.93■□□□□ 0.62
COL9A3-210ENST00000472880 PRR7Q8TB68 274 aa18.93■□□□□ 0.62
COL9A3-210ENST00000472880 MAGEC3Q8TD91 643 aa18.93■□□□□ 0.62
COL9A3-210ENST00000472880 MAIP1Q8WWC4 291 aa18.93■□□□□ 0.62
COL9A3-210ENST00000472880 ZUFSPQ96AP4 578 aa18.93■□□□□ 0.62
COL9A3-210ENST00000472880 C19orf60Q96EN9 201 aa18.93■□□□□ 0.62
COL9A3-210ENST00000472880 MIPEPQ99797 713 aa18.93■□□□□ 0.62
COL9A3-210ENST00000472880 SLC26A1Q9H2B4 701 aa18.93■□□□□ 0.62
COL9A3-210ENST00000472880 SLC6A20Q9NP91 592 aa18.93■□□□□ 0.62
COL9A3-210ENST00000472880 ASF1BQ9NVP2 202 aa18.93■□□□□ 0.62
COL9A3-210ENST00000472880 ZKSCAN5Q9Y2L8 839 aa18.93■□□□□ 0.62
COL9A3-210ENST00000472880 TARM1B6A8C7 271 aa18.92■□□□□ 0.62
COL9A3-210ENST00000472880 PFDN6O15212 129 aa18.92■□□□□ 0.62
COL9A3-210ENST00000472880 PRICKLE3O43900 615 aaPredicted RBP18.92■□□□□ 0.62
COL9A3-210ENST00000472880 ONECUT2O95948 504 aa18.92■□□□□ 0.62
COL9A3-210ENST00000472880 MGAT1P26572 445 aa18.92■□□□□ 0.62
COL9A3-210ENST00000472880 VSX2P58304 361 aaPredicted RBP18.92■□□□□ 0.62
COL9A3-210ENST00000472880 FAM214AQ32MH5 1076 aa18.92■□□□□ 0.62
COL9A3-210ENST00000472880 RNF187Q5TA31 235 aaPredicted RBP18.92■□□□□ 0.62
COL9A3-210ENST00000472880 PRAMEF13Q5VWM6 474 aa18.92■□□□□ 0.62
COL9A3-210ENST00000472880 SDCCAG8Q86SQ7 713 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms