RNA–Protein interactions for RNA: ENST00000471913.5

AMPH-208, Transcript of amphiphysin, human

TSL 1 (best)

Gene AMPH, Length 1,778 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AMPH-208	ENST00000471913	DDX6	P26196	483 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	SHMT2	P34897	504 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	SPAM1	P38567	509 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	NSG1	P42857	185 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	C21orf59	P57076	290 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	ABHD18	Q0P651	414 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	ABR	Q12979	859 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	PTGR1	Q14914	329 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	DUSP6	Q16828	381 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	DPY19L1	Q2PZI1	675 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	USP39	Q53GS9	565 aa	Known RBP	11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	FGD3	Q5JSP0	725 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	ZDHHC20	Q5W0Z9	365 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	XAF1	Q6GPH4	301 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	ANKRD26P1	Q6NSI1	321 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	ELMSAN1	Q6PJG2	1045 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	FAM151B	Q6UXP7	276 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	LINGO4	Q6UY18	593 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913		Q6ZNB5	142 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	SETD9	Q8NE22	299 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	TESC	Q96BS2	214 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	ZNF707	Q96C28	371 aa	Predicted RBP	11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	EID2B	Q96D98	161 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	REXO5	Q96IC2	774 aa	Known RBP	11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	RPL10L	Q96L21	214 aa	Known RBP	11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	OR52E6	Q96RD3	313 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	LYSMD1	Q96S90	227 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	SLC46A2	Q9BY10	475 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	KL	Q9UEF7	1012 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	ZMYM5	Q9UJ78	669 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	CRLS1	Q9UJA2	301 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	SAMD4A	Q9UPU9	718 aa	Known RBP	11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	ERVW-1	Q9UQF0	538 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	PCDHGB1	Q9Y5G3	927 aa		11.64	□□□□□ -0.55
AMPH-208	ENST00000471913	ZNF106	Q9H2Y7	1883 aa	Known RBP	11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	TRAV19	A0A0A6YYK7	116 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	GFRA2	O00451	464 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	TBL1X	O60907	577 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	XYLB	O75191	536 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	CREG1	O75629	220 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	GUCA1C	O95843	209 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	RHO	P08100	348 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	TCF3	P15923	654 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	ELK4	P28324	431 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	HNMT	P50135	292 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	RPS14	P62263	151 aa	Known RBP	11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	SMAD3	P84022	425 aa	Known RBP	11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	CDH18	Q13634	790 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	C18orf21	Q32NC0	220 aa	Predicted RBP	11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	ZIK1	Q3SY52	487 aa	Predicted RBP	11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	PRSS36	Q5K4E3	855 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	SPANXN4	Q5MJ08	99 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	GTF2IRD2B	Q6EKJ0	949 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	GTF2IRD2	Q86UP8	949 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	MSRB3	Q8IXL7	192 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	FAM217A	Q8IXS0	508 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	RGL4	Q8IZJ4	473 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	TDH	Q8IZJ6	230 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	SPART	Q8N0X7	666 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	NXPE1	Q8N323	547 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	PGBD3	Q8N328	593 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	CHDH	Q8NE62	594 aa	Predicted RBP	11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	FBXO30	Q8TB52	745 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	SNX19	Q92543	992 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	FAM120B	Q96EK7	910 aa	Known RBP	11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	HSPBAP1	Q96EW2	488 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	ALG14	Q96F25	216 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	CCDC138	Q96M89	665 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	MBOAT4	Q96T53	435 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	CPPED1	Q9BRF8	314 aa	Predicted RBP	11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	PAIP1	Q9H074	479 aa	Known RBP	11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	GABARAPL1	Q9H0R8	117 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	ADNP	Q9H2P0	1102 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	SLC32A1	Q9H598	525 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	SOX17	Q9H6I2	414 aa	Predicted RBP	11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	ATP13A3	Q9H7F0	1226 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	IL26	Q9NPH9	171 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	DNAAF2	Q9NVR5	837 aa	Known RBP	11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	SLC25A37	Q9NYZ2	338 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	SNX6	Q9UNH7	406 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	PCDHGA8	Q9Y5G5	932 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	CPQ	Q9Y646	472 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	AP1M2	Q9Y6Q5	423 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	CROCC	Q5TZA2	2017 aa		11.63	□□□□□ -0.55
AMPH-208	ENST00000471913	TRANK1	O15050	2925 aa		11.62	□□□□□ -0.55
AMPH-208	ENST00000471913	C1orf232	A0A0U1RR37	186 aa		11.62	□□□□□ -0.55
AMPH-208	ENST00000471913	LOC100130705	A0A1B0GUX0	176 aa		11.62	□□□□□ -0.55
AMPH-208	ENST00000471913		M0QX08	132 aa		11.62	□□□□□ -0.55
AMPH-208	ENST00000471913	PRMT3	O60678	531 aa		11.62	□□□□□ -0.55
AMPH-208	ENST00000471913	CLPX	O76031	633 aa		11.62	□□□□□ -0.55
AMPH-208	ENST00000471913	PRKD3	O94806	890 aa		11.62	□□□□□ -0.55
AMPH-208	ENST00000471913	TRIM16	O95361	564 aa		11.62	□□□□□ -0.55
AMPH-208	ENST00000471913	C8G	P07360	202 aa		11.62	□□□□□ -0.55
AMPH-208	ENST00000471913	BCKDHA	P12694	445 aa		11.62	□□□□□ -0.55
AMPH-208	ENST00000471913	GJA1	P17302	382 aa		11.62	□□□□□ -0.55
AMPH-208	ENST00000471913	MZF1	P28698	734 aa	Predicted RBP	11.62	□□□□□ -0.55
AMPH-208	ENST00000471913	S100A3	P33764	101 aa		11.62	□□□□□ -0.55
AMPH-208	ENST00000471913	SOX11	P35716	441 aa		11.62	□□□□□ -0.55
AMPH-208	ENST00000471913	DCT	P40126	519 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms