RNA–Protein interactions for RNA: ENST00000471640.1

NCKAP1-203, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 306 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-203ENST00000471640 RNASEH2BQ5TBB1 312 aaKnown RBP1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 LCN1P1Q5VSP4 162 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 C11orf63Q6NUN7 778 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 TEX38Q6PEX7 206 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 SLC25A47Q6Q0C1 308 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 SUSD1Q6UWL2 747 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 TMEM207Q6UWW9 146 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 Q6ZRP5 223 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 PTAR1Q7Z6K3 402 aaPredicted RBP1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 EID3Q8N140 333 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 C17orf53Q8N3J3 647 aaPredicted RBP1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 OR10S1Q8NGN2 331 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 OR1L3Q8NH93 324 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 ZNF519Q8TB69 540 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 GATAD1Q8WUU5 269 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 SSMEM1Q8WWF3 244 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 LPGAT1Q92604 370 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 ZNF622Q969S3 477 aaKnown RBP eCLIP1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 SLAMF9Q96A28 289 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 NSUN4Q96CB9 384 aaKnown RBP1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 C10orf90Q96M02 699 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 FOXN4Q96NZ1 517 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 TRIM6Q9C030 488 aaPredicted RBP1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 MED20Q9H944 212 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 TBC1D17Q9HA65 648 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 RPS10P5Q9NQ39 176 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 MAN2C1Q9NTJ4 1040 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 GIMAP4Q9NUV9 329 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 TEX10Q9NXF1 929 aaPredicted RBP1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 C19orf25Q9UFG5 118 aaPredicted RBP1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 STUB1Q9UNE7 303 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 ANGPTL3Q9Y5C1 460 aa1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 TP53BP1Q12888 1972 aaPredicted RBP1.97□□□□□ -2.09
NCKAP1-203ENST00000471640 IGKV6D-41A0A0C4DH26 115 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 FEZF1A0PJY2 475 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 FSD2A1L4K1 749 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 H0YAE9 185 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 ADAMDEC1O15204 470 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 IPO8O15397 1037 aaKnown RBP1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 IDH3BO43837 385 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 KRT33AO76009 404 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 CSH1P0DML2 217 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 CSH2P0DML3 217 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 AZU1P20160 251 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 PRKACGP22612 351 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 CSTF2P33240 577 aaKnown RBP eCLIP1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 HOXD13P35453 343 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 MATR3P43243 847 aaKnown RBP eCLIP1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 TSFMP43897 325 aaKnown RBP1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 PGFP49763 221 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 KLC1Q07866 573 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 TAF10Q12962 218 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 CALCOCO2Q13137 446 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 BAATQ14032 418 aaPredicted RBP1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 SQLEQ14534 574 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 WTAPQ15007 396 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 EFTUD2Q15029 972 aaKnown RBP eCLIP1.96□□□□□ -2.12e-7■□□□□ 8.6
NCKAP1-203ENST00000471640 HERC3Q15034 1050 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 CA9Q16790 459 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 MTHFSDQ2M296 383 aaKnown RBP1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 PHLDA2Q53GA4 152 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 SYT14P1Q58G82 188 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 IGSF11Q5DX21 431 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 SLC25A53Q5H9E4 307 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 TMEM211Q6ICI0 200 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 ZNF774Q6NX45 483 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 NOTUMQ6P988 496 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 BTN2A1Q7KYR7 527 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 MINDY1Q8N5J2 469 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 TDRD5Q8NAT2 981 aaKnown RBP1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 OR2L2Q8NH16 312 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 OR6S1Q8NH40 331 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 PRPF31Q8WWY3 499 aaKnown RBP1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 ATL1Q8WXF7 558 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 SPACA9Q96E40 222 aaPredicted RBP1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 OMA1Q96E52 524 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 SPDL1Q96EA4 605 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 SFXN2Q96NB2 322 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 GAL3ST4Q96RP7 486 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 SEPHS2Q99611 448 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 OLFM1Q99784 485 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 NKX3-1Q99801 234 aaPredicted RBP1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 SHARPINQ9H0F6 387 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 THAP2Q9H0W7 228 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 GHITMQ9H3K2 345 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 CHST11Q9NPF2 352 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 SPHK2Q9NRA0 654 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 PANK4Q9NVE7 773 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 HAUS2Q9NVX0 235 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 NDE1Q9NXR1 346 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 NUDT4Q9NZJ9 180 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 VPS28Q9UK41 221 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 TP53TG3Q9ULZ0 132 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 TNNQ9UQP3 1299 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 PPP2R2CQ9Y2T4 447 aa1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 PTRH2Q9Y3E5 179 aaKnown RBP1.96□□□□□ -2.1
NCKAP1-203ENST00000471640 A0A1W2PPR1 153 aa1.95□□□□□ -2.1
NCKAP1-203ENST00000471640 MEIS2O14770 477 aa1.95□□□□□ -2.1
NCKAP1-203ENST00000471640 ERAL1O75616 437 aaKnown RBP1.95□□□□□ -2.1
NCKAP1-203ENST00000471640 C22orf31O95567 290 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms