RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 F7P08709 466 aaPredicted RBP13.53□□□□□ -0.24
COMMD3-208ENST00000470045 CHRM3P20309 590 aa13.53□□□□□ -0.24
COMMD3-208ENST00000470045 PMS2P54278 862 aa13.53□□□□□ -0.24
COMMD3-208ENST00000470045 CRYMQ14894 314 aa13.53□□□□□ -0.24
COMMD3-208ENST00000470045 CYP2A13Q16696 494 aa13.53□□□□□ -0.24
COMMD3-208ENST00000470045 PTCHD3Q3KNS1 767 aa13.53□□□□□ -0.24
COMMD3-208ENST00000470045 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.53□□□□□ -0.24
COMMD3-208ENST00000470045 NEK10Q6ZWH5 1172 aa13.53□□□□□ -0.24
COMMD3-208ENST00000470045 PCGF5Q86SE9 256 aa13.53□□□□□ -0.24
COMMD3-208ENST00000470045 TAX1BP1Q86VP1 789 aa13.53□□□□□ -0.24
COMMD3-208ENST00000470045 APLFQ8IW19 511 aaPredicted RBP13.53□□□□□ -0.24
COMMD3-208ENST00000470045 FAM20CQ8IXL6 584 aa13.53□□□□□ -0.24
COMMD3-208ENST00000470045 MAGEC3Q8TD91 643 aa13.53□□□□□ -0.24
COMMD3-208ENST00000470045 ADAMTS17Q8TE56 1095 aa13.53□□□□□ -0.24
COMMD3-208ENST00000470045 SKA2Q8WVK7 121 aaPredicted RBP13.53□□□□□ -0.24
COMMD3-208ENST00000470045 FAM136AQ96C01 138 aa13.53□□□□□ -0.24
COMMD3-208ENST00000470045 CAPZA3Q96KX2 299 aa13.53□□□□□ -0.24
COMMD3-208ENST00000470045 RUNDC3BQ96NL0 473 aa13.53□□□□□ -0.24
COMMD3-208ENST00000470045 SLC30A3Q99726 388 aa13.53□□□□□ -0.24
COMMD3-208ENST00000470045 FAM167BQ9BTA0 163 aa13.53□□□□□ -0.24
COMMD3-208ENST00000470045 C20orf96Q9NUD7 363 aaPredicted RBP13.53□□□□□ -0.24
COMMD3-208ENST00000470045 FBXO5Q9UKT4 447 aa13.53□□□□□ -0.24
COMMD3-208ENST00000470045 SRPK3Q9UPE1 567 aa13.53□□□□□ -0.24
COMMD3-208ENST00000470045 PLCL2Q9UPR0 1127 aa13.53□□□□□ -0.24
COMMD3-208ENST00000470045 SAR1BQ9Y6B6 198 aa13.53□□□□□ -0.24
COMMD3-208ENST00000470045 COMMD10Q9Y6G5 202 aa13.53□□□□□ -0.24
COMMD3-208ENST00000470045 TENM4Q6N022 2769 aa13.53□□□□□ -0.24
COMMD3-208ENST00000470045 PCSK5Q92824 1860 aa13.53□□□□□ -0.24
COMMD3-208ENST00000470045 CTAGE9A4FU28 777 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 MYO1CO00159 1063 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 ZSCAN9O15535 394 aaPredicted RBP13.52□□□□□ -0.25
COMMD3-208ENST00000470045 TTC4O95801 387 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 DHX9Q08211 1270 aaKnown RBP13.52□□□□□ -0.25
COMMD3-208ENST00000470045 MORF4L2Q15014 288 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 NCF4Q15080 339 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 KLHL38Q2WGJ6 581 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 MSS51Q4VC12 460 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 FCRL6Q6DN72 434 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 TLDC1Q6P9B6 456 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 KCNMB4Q86W47 210 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 RAB42Q8N4Z0 105 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 C2orf73Q8N5S3 287 aaPredicted RBP13.52□□□□□ -0.25
COMMD3-208ENST00000470045 ENDOVQ8N8Q3 282 aaKnown RBP13.52□□□□□ -0.25
COMMD3-208ENST00000470045 FBXO15Q8NCQ5 510 aaPredicted RBP13.52□□□□□ -0.25
COMMD3-208ENST00000470045 OR2A1Q8NGT9 310 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 C9orf43Q8TAL5 461 aaPredicted RBP13.52□□□□□ -0.25
COMMD3-208ENST00000470045 PROKR1Q8TCW9 393 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 CD200R1Q8TD46 325 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 THAP4Q8WY91 577 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 N4BP2L2Q92802 583 aaPredicted RBP13.52□□□□□ -0.25
COMMD3-208ENST00000470045 ZNF285Q96NJ3 590 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 GBP5Q96PP8 586 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 EBNA1BP2Q99848 306 aaKnown RBP13.52□□□□□ -0.25
COMMD3-208ENST00000470045 NAT9Q9BTE0 207 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 SPRTNQ9H040 489 aaPredicted RBP13.52□□□□□ -0.25
COMMD3-208ENST00000470045 PLAC1Q9HBJ0 212 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 INTS7Q9NVH2 962 aaKnown RBP13.52□□□□□ -0.25
COMMD3-208ENST00000470045 EURLQ9NYK6 297 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 TCFL5Q9UL49 500 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 KLHL20Q9Y2M5 609 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 DHRS7Q9Y394 339 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 NUP210LQ5VU65 1888 aa13.52□□□□□ -0.25
COMMD3-208ENST00000470045 HEATR5BQ9P2D3 2071 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 CCDC88CQ9P219 2028 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 TARM1B6A8C7 271 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 CCDC188H7C350 402 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 J3QKU1 62 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 SMAPO00193 183 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 TP73O15350 636 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 SUV39H1O43463 412 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 BANF1O75531 89 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 MPC1LP0DKB6 136 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 ENO3P13929 434 aaPredicted RBP13.51□□□□□ -0.25
COMMD3-208ENST00000470045 PSMB5P28074 263 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 GRIA3P42263 894 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 MPP1Q00013 466 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 DR1Q01658 176 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 ARHGAP19Q14CB8 494 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 SF1Q15637 639 aaKnown RBP13.51□□□□□ -0.25
COMMD3-208ENST00000470045 TTLL9Q3SXZ7 439 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 HSP90AA5PQ58FG0 334 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 SPANXN3Q5MJ09 141 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 HIBCHQ6NVY1 386 aaPredicted RBP13.51□□□□□ -0.25
COMMD3-208ENST00000470045 FIGLAQ6QHK4 219 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 CNTN4Q8IWV2 1026 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 C2CD4AQ8NCU7 369 aaPredicted RBP13.51□□□□□ -0.25
COMMD3-208ENST00000470045 OR2L3Q8NG85 312 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 OR9A1PQ8NGU1 263 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 ABHD17AQ96GS6 310 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 WDR83Q9BRX9 315 aaKnown RBP13.51□□□□□ -0.25
COMMD3-208ENST00000470045 AARSD1Q9BTE6 412 aaKnown RBP13.51□□□□□ -0.25
COMMD3-208ENST00000470045 DHRS4Q9BTZ2 278 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 SLC7A5P2Q9GIP4 190 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 CCDC68Q9H2F9 335 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 FAM114A2Q9NRY5 505 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 RNF14Q9UBS8 474 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 TSR3Q9UJK0 312 aaKnown RBP13.51□□□□□ -0.25
COMMD3-208ENST00000470045 SNX7Q9UNH6 387 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 MAN2B2Q9Y2E5 1009 aa13.51□□□□□ -0.25
COMMD3-208ENST00000470045 MED13Q9UHV7 2174 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms