RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 MAST4O15021 2626 aa15.66■□□□□ 0.1
COL9A3-208ENST00000469802 A0A1W2PPV9 198 aa15.65■□□□□ 0.1
COL9A3-208ENST00000469802 KRT87PA6NCN2 255 aa15.65■□□□□ 0.1
COL9A3-208ENST00000469802 H3BMM5 538 aa15.65■□□□□ 0.1
COL9A3-208ENST00000469802 NIPSNAP2O75323 286 aa15.65■□□□□ 0.1
COL9A3-208ENST00000469802 AVILO75366 819 aa15.65■□□□□ 0.1
COL9A3-208ENST00000469802 MATN4O95460 622 aa15.65■□□□□ 0.1
COL9A3-208ENST00000469802 ESR1P03372 595 aa15.65■□□□□ 0.1
COL9A3-208ENST00000469802 CD63P08962 238 aa15.65■□□□□ 0.1
COL9A3-208ENST00000469802 ERGP11308 486 aa15.65■□□□□ 0.1
COL9A3-208ENST00000469802 CCNFP41002 786 aa15.65■□□□□ 0.1
COL9A3-208ENST00000469802 FOLR3P41439 243 aa15.65■□□□□ 0.1
COL9A3-208ENST00000469802 SRSF1Q07955 248 aaKnown RBP eCLIP15.65■□□□□ 0.1
COL9A3-208ENST00000469802 GPS1Q13098 491 aa15.65■□□□□ 0.1
COL9A3-208ENST00000469802 SSPNQ14714 243 aa15.65■□□□□ 0.1
COL9A3-208ENST00000469802 TRIP13Q15645 432 aaPredicted RBP15.65■□□□□ 0.1
COL9A3-208ENST00000469802 CYP1B1Q16678 543 aa15.65■□□□□ 0.1
COL9A3-208ENST00000469802 CENPUQ71F23 418 aa15.65■□□□□ 0.1
COL9A3-208ENST00000469802 HPS6Q86YV9 775 aa15.65■□□□□ 0.1
COL9A3-208ENST00000469802 MCATQ8IVS2 390 aaKnown RBP15.65■□□□□ 0.1
COL9A3-208ENST00000469802 TMEM151BQ8IW70 566 aa15.65■□□□□ 0.1
COL9A3-208ENST00000469802 OTUD6BQ8N6M0 293 aa15.65■□□□□ 0.1
COL9A3-208ENST00000469802 GSDMBQ8TAX9 411 aa15.65■□□□□ 0.1
COL9A3-208ENST00000469802 DLG3Q92796 817 aa15.65■□□□□ 0.1
COL9A3-208ENST00000469802 FKBP10Q96AY3 582 aa15.65■□□□□ 0.1
COL9A3-208ENST00000469802 SMAD5Q99717 465 aaKnown RBP15.65■□□□□ 0.1
COL9A3-208ENST00000469802 TRIM56Q9BRZ2 755 aaKnown RBP15.65■□□□□ 0.1
COL9A3-208ENST00000469802 NDC1Q9BTX1 674 aa15.65■□□□□ 0.1
COL9A3-208ENST00000469802 IFT80Q9P2H3 777 aaPredicted RBP15.65■□□□□ 0.1
COL9A3-208ENST00000469802 PTRH2Q9Y3E5 179 aaKnown RBP15.65■□□□□ 0.1
COL9A3-208ENST00000469802 A0A1B0GX78 115 aa15.64■□□□□ 0.09
COL9A3-208ENST00000469802 CYSRT1A8MQ03 144 aa15.64■□□□□ 0.09
COL9A3-208ENST00000469802 TARM1B6A8C7 271 aa15.64■□□□□ 0.09
COL9A3-208ENST00000469802 KRT14P02533 472 aa15.64■□□□□ 0.09
COL9A3-208ENST00000469802 UMODP07911 640 aa15.64■□□□□ 0.09
COL9A3-208ENST00000469802 MLNP12872 115 aa15.64■□□□□ 0.09
COL9A3-208ENST00000469802 PSMB5P28074 263 aa15.64■□□□□ 0.09
COL9A3-208ENST00000469802 FMO4P31512 558 aa15.64■□□□□ 0.09
COL9A3-208ENST00000469802 OTX2P32243 289 aa15.64■□□□□ 0.09
COL9A3-208ENST00000469802 GRIA3P42263 894 aa15.64■□□□□ 0.09
COL9A3-208ENST00000469802 VPS41P49754 854 aa15.64■□□□□ 0.09
COL9A3-208ENST00000469802 SLC9A5Q14940 896 aa15.64■□□□□ 0.09
COL9A3-208ENST00000469802 YOD1Q5VVQ6 348 aaPredicted RBP15.64■□□□□ 0.09
COL9A3-208ENST00000469802 MLIPQ5VWP3 458 aa15.64■□□□□ 0.09
COL9A3-208ENST00000469802 CNSTQ6PJW8 725 aa15.64■□□□□ 0.09
COL9A3-208ENST00000469802 FIGLAQ6QHK4 219 aa15.64■□□□□ 0.09
COL9A3-208ENST00000469802 PPP1R32Q7Z5V6 425 aa15.64■□□□□ 0.09
COL9A3-208ENST00000469802 SDCCAG8Q86SQ7 713 aaPredicted RBP15.64■□□□□ 0.09
COL9A3-208ENST00000469802 CILP2Q8IUL8 1156 aa15.64■□□□□ 0.09
COL9A3-208ENST00000469802 GPR83Q9NYM4 423 aa15.64■□□□□ 0.09
COL9A3-208ENST00000469802 SPATA7Q9P0W8 599 aa15.64■□□□□ 0.09
COL9A3-208ENST00000469802 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.64■□□□□ 0.09
COL9A3-208ENST00000469802 NDOR1Q9UHB4 597 aa15.64■□□□□ 0.09
COL9A3-208ENST00000469802 GPN3Q9UHW5 284 aaPredicted RBP15.64■□□□□ 0.09
COL9A3-208ENST00000469802 PRRC2CQ9Y520 2896 aaKnown RBP15.64■□□□□ 0.09
COL9A3-208ENST00000469802 USP9YO00507 2555 aaPredicted RBP15.63■□□□□ 0.09
COL9A3-208ENST00000469802 FAM237BA0A1B0GVD1 139 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 FITM1A5D6W6 292 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 ZNF185O15231 689 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 DPM1O60762 260 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 CTSVO60911 334 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 MAGEA3P43357 314 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 ARSFP54793 590 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 FOXL2P58012 376 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 SARNPP82979 210 aaKnown RBP15.63■□□□□ 0.09
COL9A3-208ENST00000469802 UBAP2LQ14157 1087 aaKnown RBP15.63■□□□□ 0.09
COL9A3-208ENST00000469802 SF1Q15637 639 aaKnown RBP15.63■□□□□ 0.09
COL9A3-208ENST00000469802 CYP2A13Q16696 494 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 ZC3H12BQ5HYM0 836 aaKnown RBP15.63■□□□□ 0.09
COL9A3-208ENST00000469802 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.63■□□□□ 0.09
COL9A3-208ENST00000469802 TCTE1Q5JU00 501 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 DCAF10Q5QP82 559 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 TTC23LQ6PF05 361 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 RNF44Q7L0R7 432 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 ATCAYQ86WG3 371 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 Q8NA96 180 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 MCUQ8NE86 351 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 OR2L3Q8NG85 312 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 OR2A1Q8NGT9 310 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 SKA2Q8WVK7 121 aaPredicted RBP15.63■□□□□ 0.09
COL9A3-208ENST00000469802 ZUFSPQ96AP4 578 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 FOPNLQ96NB1 174 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 WDR54Q9H977 334 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 XAB2Q9HCS7 855 aaKnown RBP15.63■□□□□ 0.09
COL9A3-208ENST00000469802 IRAK4Q9NWZ3 460 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 CRYL1Q9Y2S2 319 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 JRKLQ9Y4A0 524 aa15.63■□□□□ 0.09
COL9A3-208ENST00000469802 RP1L1Q8IWN7 2480 aaPredicted RBP15.62■□□□□ 0.09
COL9A3-208ENST00000469802 ZCWPW2A0A1B0GU75 182 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 ARHGEF33A8MVX0 844 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 DSCR3O14972 297 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 PFDN6O15212 129 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 NRP2O60462 931 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 PSIP1O75475 530 aaKnown RBP15.62■□□□□ 0.09
COL9A3-208ENST00000469802 PAMP19021 973 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 MCM3P25205 808 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 TERF1P54274 439 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 GRM7Q14831 915 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 VWA5B1Q5TIE3 1220 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 NEPROQ6NW34 567 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms