RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 FCHO1O14526 889 aa17.15■□□□□ 0.34
MRPL28-208ENST00000469744 TRIM13O60858 407 aa17.15■□□□□ 0.34
MRPL28-208ENST00000469744 SNUPNO95149 360 aaKnown RBP17.15■□□□□ 0.34
MRPL28-208ENST00000469744 SLC35E2BP0CK96 405 aa17.15■□□□□ 0.34
MRPL28-208ENST00000469744 PTPN4P29074 926 aa17.15■□□□□ 0.34
MRPL28-208ENST00000469744 AKT1P31749 480 aa17.15■□□□□ 0.34
MRPL28-208ENST00000469744 CSTF2P33240 577 aaKnown RBP eCLIP17.15■□□□□ 0.34
MRPL28-208ENST00000469744 SLC19A1P41440 591 aa17.15■□□□□ 0.34
MRPL28-208ENST00000469744 UCNP55089 124 aa17.15■□□□□ 0.34
MRPL28-208ENST00000469744 MPP1Q00013 466 aa17.15■□□□□ 0.34
MRPL28-208ENST00000469744 ASPHQ12797 758 aa17.15■□□□□ 0.34
MRPL28-208ENST00000469744 ITGA9Q13797 1035 aa17.15■□□□□ 0.34
MRPL28-208ENST00000469744 LDLRAP1Q5SW96 308 aa17.15■□□□□ 0.34
MRPL28-208ENST00000469744 FAM129CQ86XR2 697 aa17.15■□□□□ 0.34
MRPL28-208ENST00000469744 DENND6AQ8IWF6 608 aa17.15■□□□□ 0.34
MRPL28-208ENST00000469744 TRIM48Q8IWZ4 208 aa17.15■□□□□ 0.34
MRPL28-208ENST00000469744 SH3KBP1Q96B97 665 aa17.15■□□□□ 0.34
MRPL28-208ENST00000469744 SLC7A6OSQ96CW6 309 aaPredicted RBP17.15■□□□□ 0.34
MRPL28-208ENST00000469744 TSPAN17Q96FV3 270 aa17.15■□□□□ 0.34
MRPL28-208ENST00000469744 ZCCHC2Q9C0B9 1178 aaKnown RBP17.15■□□□□ 0.34
MRPL28-208ENST00000469744 OCIAD1Q9NX40 245 aa17.15■□□□□ 0.34
MRPL28-208ENST00000469744 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.15■□□□□ 0.34
MRPL28-208ENST00000469744 WDR37Q9Y2I8 494 aa17.15■□□□□ 0.34
MRPL28-208ENST00000469744 FASNP49327 2511 aaKnown RBP17.15■□□□□ 0.34
MRPL28-208ENST00000469744 LDB2O43679 373 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 KLHL2O95198 593 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 VIPP01282 170 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 TYRP1P17643 537 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 CALB2P22676 271 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 PSMA3P25788 255 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 IRF9Q00978 393 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 VAC14Q08AM6 782 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 CTBP1Q13363 440 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 TRA2AQ13595 282 aaKnown RBP eCLIP17.14■□□□□ 0.33
MRPL28-208ENST00000469744 SNCBQ16143 134 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 ZNF470Q6ECI4 717 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 TMEM220Q6QAJ8 160 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 FAM83HQ6ZRV2 1179 aaPredicted RBP17.14■□□□□ 0.33
MRPL28-208ENST00000469744 ZCCHC23Q6ZST2 131 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 BEND7Q8N7W2 519 aaPredicted RBP17.14■□□□□ 0.33
MRPL28-208ENST00000469744 AGBL5Q8NDL9 886 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 ACVR1CQ8NER5 493 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 OR13J1Q8NGT2 312 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 GPR150Q8NGU9 434 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 DTX3LQ8TDB6 740 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 BRSK1Q8TDC3 778 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 STYXQ8WUJ0 223 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 JPH3Q8WXH2 748 aaPredicted RBP17.14■□□□□ 0.33
MRPL28-208ENST00000469744 PTCD3Q96EY7 689 aaKnown RBP17.14■□□□□ 0.33
MRPL28-208ENST00000469744 UBL7Q96S82 380 aaPredicted RBP17.14■□□□□ 0.33
MRPL28-208ENST00000469744 SORT1Q99523 831 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 DPYSL5Q9BPU6 564 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 ZNF358Q9NW07 568 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 OXSMQ9NWU1 459 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 FAM8A1Q9UBU6 413 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 HAO1Q9UJM8 370 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 ACSL6Q9UKU0 697 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 PSMD13Q9UNM6 376 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 SSUH2Q9Y2M2 353 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 SLC30A1Q9Y6M5 507 aa17.14■□□□□ 0.33
MRPL28-208ENST00000469744 PIEZO2Q9H5I5 2752 aa17.13■□□□□ 0.33
MRPL28-208ENST00000469744 CCDC78A2IDD5 438 aa17.13■□□□□ 0.33
MRPL28-208ENST00000469744 EFCAB7A8K855 629 aa17.13■□□□□ 0.33
MRPL28-208ENST00000469744 TARM1B6A8C7 271 aa17.13■□□□□ 0.33
MRPL28-208ENST00000469744 ITM2AO43736 263 aa17.13■□□□□ 0.33
MRPL28-208ENST00000469744 POP7O75817 140 aaKnown RBP17.13■□□□□ 0.33
MRPL28-208ENST00000469744 WFS1O76024 890 aa17.13■□□□□ 0.33
MRPL28-208ENST00000469744 SRP72O76094 671 aaKnown RBP17.13■□□□□ 0.33
MRPL28-208ENST00000469744 PRB1P04280 392 aa17.13■□□□□ 0.33
MRPL28-208ENST00000469744 VCLP18206 1134 aa17.13■□□□□ 0.33
MRPL28-208ENST00000469744 XRCC1P18887 633 aaPredicted RBP17.13■□□□□ 0.33
MRPL28-208ENST00000469744 IDSP22304 550 aa17.13■□□□□ 0.33
MRPL28-208ENST00000469744 SLC26A3P40879 764 aa17.13■□□□□ 0.33
MRPL28-208ENST00000469744 ARSDP51689 593 aa17.13■□□□□ 0.33
MRPL28-208ENST00000469744 ZNF140P52738 457 aaPredicted RBP17.13■□□□□ 0.33
MRPL28-208ENST00000469744 EPHA4P54764 986 aa17.13■□□□□ 0.33
MRPL28-208ENST00000469744 AQP5P55064 265 aa17.13■□□□□ 0.33
MRPL28-208ENST00000469744 CLCA4Q14CN2 919 aa17.13■□□□□ 0.33
MRPL28-208ENST00000469744 WDR74Q6RFH5 385 aaPredicted RBP17.13■□□□□ 0.33
MRPL28-208ENST00000469744 TMEM26Q6ZUK4 368 aa17.13■□□□□ 0.33
MRPL28-208ENST00000469744 VASH2Q86V25 355 aa17.13■□□□□ 0.33
MRPL28-208ENST00000469744 AMZ2Q86W34 360 aa17.13■□□□□ 0.33
MRPL28-208ENST00000469744 SGF29Q96ES7 293 aa17.13■□□□□ 0.33
MRPL28-208ENST00000469744 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.13■□□□□ 0.33
MRPL28-208ENST00000469744 ASB8Q9H765 288 aa17.13■□□□□ 0.33
MRPL28-208ENST00000469744 ZNF395Q9H8N7 513 aaPredicted RBP17.13■□□□□ 0.33
MRPL28-208ENST00000469744 SMOXQ9NWM0 555 aa17.13■□□□□ 0.33
MRPL28-208ENST00000469744 RUVBL2Q9Y230 463 aaKnown RBP17.13■□□□□ 0.33
MRPL28-208ENST00000469744 TEX51A0A1B0GUA7 166 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 LILRA5A6NI73 299 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 EFSO43281 561 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 CRTAMO95727 393 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 SERPINA6P08185 405 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 KRT16P08779 473 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 LIPCP11150 499 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 MSH3P20585 1137 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 SLC12A2P55011 1212 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 GFERP55789 205 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 XIAPP98170 497 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 NFE2L1Q14494 772 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms