RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 PTRHD1Q6GMV3 140 aaKnown RBP20.22■□□□□ 0.83
COL9A3-207ENST00000467819 FIGLAQ6QHK4 219 aa20.22■□□□□ 0.83
COL9A3-207ENST00000467819 SLC13A5Q86YT5 568 aaPredicted RBP20.22■□□□□ 0.83
COL9A3-207ENST00000467819 CCDC89Q8N998 374 aa20.22■□□□□ 0.83
COL9A3-207ENST00000467819 OR2L8Q8NGY9 312 aa20.22■□□□□ 0.83
COL9A3-207ENST00000467819 ZBTB20Q9HC78 741 aaPredicted RBP20.22■□□□□ 0.83
COL9A3-207ENST00000467819 ATP13A2Q9NQ11 1180 aa20.22■□□□□ 0.83
COL9A3-207ENST00000467819 CHRAC1Q9NRG0 131 aa20.22■□□□□ 0.83
COL9A3-207ENST00000467819 INTS7Q9NVH2 962 aaKnown RBP20.22■□□□□ 0.83
COL9A3-207ENST00000467819 AGPSO00116 658 aa20.21■□□□□ 0.83
COL9A3-207ENST00000467819 PRMT5O14744 637 aaPredicted RBP20.21■□□□□ 0.83
COL9A3-207ENST00000467819 RASGRF2O14827 1237 aa20.21■□□□□ 0.83
COL9A3-207ENST00000467819 KLHL41O60662 606 aa20.21■□□□□ 0.83
COL9A3-207ENST00000467819 IPO13O94829 963 aaKnown RBP20.21■□□□□ 0.83
COL9A3-207ENST00000467819 ZSCAN5DPP0CG00 497 aa20.21■□□□□ 0.83
COL9A3-207ENST00000467819 ITGA3P26006 1051 aa20.21■□□□□ 0.83
COL9A3-207ENST00000467819 GCGRP47871 477 aa20.21■□□□□ 0.83
COL9A3-207ENST00000467819 SESN2P58004 480 aaPredicted RBP20.21■□□□□ 0.83
COL9A3-207ENST00000467819 ZADH2Q8N4Q0 377 aa20.21■□□□□ 0.83
COL9A3-207ENST00000467819 GSDMBQ8TAX9 411 aa20.21■□□□□ 0.83
COL9A3-207ENST00000467819 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.21■□□□□ 0.83
COL9A3-207ENST00000467819 TM9SF4Q92544 642 aa20.21■□□□□ 0.83
COL9A3-207ENST00000467819 INPP5DQ92835 1189 aa20.21■□□□□ 0.83
COL9A3-207ENST00000467819 FKBP10Q96AY3 582 aa20.21■□□□□ 0.83
COL9A3-207ENST00000467819 CUTCQ9NTM9 273 aa20.21■□□□□ 0.83
COL9A3-207ENST00000467819 PAK5Q9P286 719 aa20.21■□□□□ 0.83
COL9A3-207ENST00000467819 CDC23Q9UJX2 597 aa20.21■□□□□ 0.83
COL9A3-207ENST00000467819 FBXL4Q9UKA2 621 aa20.21■□□□□ 0.83
COL9A3-207ENST00000467819 CACNA1DQ01668 2161 aa20.21■□□□□ 0.83
COL9A3-207ENST00000467819 DSCR3O14972 297 aa20.2■□□□□ 0.82
COL9A3-207ENST00000467819 CD3EAPO15446 510 aaKnown RBP20.2■□□□□ 0.82
COL9A3-207ENST00000467819 SLCO2B1O94956 709 aa20.2■□□□□ 0.82
COL9A3-207ENST00000467819 BDKRB1P46663 353 aa20.2■□□□□ 0.82
COL9A3-207ENST00000467819 TTPAP49638 278 aa20.2■□□□□ 0.82
COL9A3-207ENST00000467819 CRADDP78560 199 aa20.2■□□□□ 0.82
COL9A3-207ENST00000467819 AIMP2Q13155 320 aaKnown RBP20.2■□□□□ 0.82
COL9A3-207ENST00000467819 ZC3H12BQ5HYM0 836 aaKnown RBP20.2■□□□□ 0.82
COL9A3-207ENST00000467819 TTC23LQ6PF05 361 aa20.2■□□□□ 0.82
COL9A3-207ENST00000467819 IGFL3Q6UXB1 125 aa20.2■□□□□ 0.82
COL9A3-207ENST00000467819 SHISA6Q6ZSJ9 500 aa20.2■□□□□ 0.82
COL9A3-207ENST00000467819 OVCH1Q7RTY7 1134 aa20.2■□□□□ 0.82
COL9A3-207ENST00000467819 METTL27Q8N6F8 245 aaPredicted RBP20.2■□□□□ 0.82
COL9A3-207ENST00000467819 SPC24Q8NBT2 197 aa20.2■□□□□ 0.82
COL9A3-207ENST00000467819 SKA2Q8WVK7 121 aaPredicted RBP20.2■□□□□ 0.82
COL9A3-207ENST00000467819 PEX13Q92968 403 aa20.2■□□□□ 0.82
COL9A3-207ENST00000467819 SELENOSQ9BQE4 189 aa20.2■□□□□ 0.82
COL9A3-207ENST00000467819 SLC6A20Q9NP91 592 aa20.2■□□□□ 0.82
COL9A3-207ENST00000467819 GUCA1BQ9UMX6 200 aa20.2■□□□□ 0.82
COL9A3-207ENST00000467819 RUVBL2Q9Y230 463 aaKnown RBP20.2■□□□□ 0.82
COL9A3-207ENST00000467819 NFS1Q9Y697 457 aa20.2■□□□□ 0.82
COL9A3-207ENST00000467819 SVILO95425 2214 aa20.19■□□□□ 0.82
COL9A3-207ENST00000467819 KRT87PA6NCN2 255 aa20.19■□□□□ 0.82
COL9A3-207ENST00000467819 PIM1P11309 404 aaPredicted RBP20.19■□□□□ 0.82
COL9A3-207ENST00000467819 MMP11P24347 488 aa20.19■□□□□ 0.82
COL9A3-207ENST00000467819 PSMB5P28074 263 aa20.19■□□□□ 0.82
COL9A3-207ENST00000467819 GLRBP48167 497 aa20.19■□□□□ 0.82
COL9A3-207ENST00000467819 GRM7Q14831 915 aa20.19■□□□□ 0.82
COL9A3-207ENST00000467819 NKG7Q16617 165 aa20.19■□□□□ 0.82
COL9A3-207ENST00000467819 PCID2Q5JVF3 399 aa20.19■□□□□ 0.82
COL9A3-207ENST00000467819 COX15Q7KZN9 410 aa20.19■□□□□ 0.82
COL9A3-207ENST00000467819 LURAP1LQ8IV03 231 aa20.19■□□□□ 0.82
COL9A3-207ENST00000467819 RNF10Q8N5U6 811 aaKnown RBP20.19■□□□□ 0.82
COL9A3-207ENST00000467819 TTC29Q8NA56 475 aaPredicted RBP20.19■□□□□ 0.82
COL9A3-207ENST00000467819 DENND1AQ8TEH3 1009 aa20.19■□□□□ 0.82
COL9A3-207ENST00000467819 PANX3Q96QZ0 392 aa20.19■□□□□ 0.82
COL9A3-207ENST00000467819 RAB11FIP5Q9BXF6 653 aa20.19■□□□□ 0.82
COL9A3-207ENST00000467819 SOX17Q9H6I2 414 aaPredicted RBP20.19■□□□□ 0.82
COL9A3-207ENST00000467819 GNPTGQ9UJJ9 305 aa20.19■□□□□ 0.82
COL9A3-207ENST00000467819 TSR3Q9UJK0 312 aaKnown RBP20.19■□□□□ 0.82
COL9A3-207ENST00000467819 TTC7AQ9ULT0 858 aaPredicted RBP20.19■□□□□ 0.82
COL9A3-207ENST00000467819 HEATR5BQ9P2D3 2071 aa20.18■□□□□ 0.82
COL9A3-207ENST00000467819 CBX6O95503 412 aa20.18■□□□□ 0.82
COL9A3-207ENST00000467819 DDAH2O95865 285 aa20.18■□□□□ 0.82
COL9A3-207ENST00000467819 RPL22P35268 128 aaKnown RBP20.18■□□□□ 0.82
COL9A3-207ENST00000467819 SOX8P57073 446 aa20.18■□□□□ 0.82
COL9A3-207ENST00000467819 VSX2P58304 361 aaPredicted RBP20.18■□□□□ 0.82
COL9A3-207ENST00000467819 CCSMST1Q4G0I0 132 aa20.18■□□□□ 0.82
COL9A3-207ENST00000467819 TCTE1Q5JU00 501 aa20.18■□□□□ 0.82
COL9A3-207ENST00000467819 CUZD1Q86UP6 607 aa20.18■□□□□ 0.82
COL9A3-207ENST00000467819 DTWD1Q8N5C7 304 aa20.18■□□□□ 0.82
COL9A3-207ENST00000467819 OTUD6BQ8N6M0 293 aa20.18■□□□□ 0.82
COL9A3-207ENST00000467819 RAD51AP1Q96B01 352 aa20.18■□□□□ 0.82
COL9A3-207ENST00000467819 SPSB2Q99619 263 aa20.18■□□□□ 0.82
COL9A3-207ENST00000467819 MIPEPQ99797 713 aa20.18■□□□□ 0.82
COL9A3-207ENST00000467819 P2RY12Q9H244 342 aa20.18■□□□□ 0.82
COL9A3-207ENST00000467819 WDR54Q9H977 334 aa20.18■□□□□ 0.82
COL9A3-207ENST00000467819 CTSFQ9UBX1 484 aa20.18■□□□□ 0.82
COL9A3-207ENST00000467819 ERRFI1Q9UJM3 462 aaPredicted RBP20.18■□□□□ 0.82
COL9A3-207ENST00000467819 NTNG1Q9Y2I2 539 aa20.18■□□□□ 0.82
COL9A3-207ENST00000467819 CSAG2Q9Y5P2 127 aa20.18■□□□□ 0.82
COL9A3-207ENST00000467819 COPG1Q9Y678 874 aaKnown RBP20.18■□□□□ 0.82
COL9A3-207ENST00000467819 DIDO1Q9BTC0 2240 aaKnown RBP20.17■□□□□ 0.82
COL9A3-207ENST00000467819 SOCS6O14544 535 aa20.17■□□□□ 0.82
COL9A3-207ENST00000467819 PRICKLE3O43900 615 aaPredicted RBP20.17■□□□□ 0.82
COL9A3-207ENST00000467819 CTSVO60911 334 aa20.17■□□□□ 0.82
COL9A3-207ENST00000467819 NDUFS3O75489 264 aa20.17■□□□□ 0.82
COL9A3-207ENST00000467819 C1orf105O95561 183 aa20.17■□□□□ 0.82
COL9A3-207ENST00000467819 ALBP02768 609 aa20.17■□□□□ 0.82
COL9A3-207ENST00000467819 NMBRP28336 390 aa20.17■□□□□ 0.82
COL9A3-207ENST00000467819 OR1D4P47884 311 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms