RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 COMMD3-BMI1R4GMX3 469 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 LOC100506127A0A0U1RQW1 187 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 GTPBP1O00178 669 aaKnown RBP13.46□□□□□ -0.25
BRAT1-203ENST00000467558 G6PDP11413 515 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 ETV3P41162 512 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 AGTR2P50052 363 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 UFM1P61960 85 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 WDR5P61964 334 aaKnown RBP13.46□□□□□ -0.25
BRAT1-203ENST00000467558 GRM2Q14416 872 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 CCDC103Q8IW40 242 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 DCUN1D3Q8IWE4 304 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 WDR60Q8WVS4 1066 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 DGCR14Q96DF8 476 aaKnown RBP13.46□□□□□ -0.25
BRAT1-203ENST00000467558 TRIB3Q96RU7 358 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 SLC39A3Q9BRY0 314 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 EFCAB10A6NFE3 127 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 CLIC1O00299 241 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 SDHDO14521 159 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 GRID2O43424 1007 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 PGRP06401 933 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 BDKRB1P46663 353 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 CDKN2DP55273 166 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 UBXN2BQ14CS0 331 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 KDELC1Q6UW63 502 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 RBM44Q6ZP01 1051 aaKnown RBP13.46□□□□□ -0.25
BRAT1-203ENST00000467558 FAM129CQ86XR2 697 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 TMEM25Q86YD3 366 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 CHCHD4Q8N4Q1 142 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 MTERF3Q96E29 417 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 CMTM7Q96FZ5 175 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 CLSTN3Q9BQT9 956 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 HMG20AQ9NP66 347 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 HSFX1Q9UBD0 423 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 DNAJB9Q9UBS3 223 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 RNF11Q9Y3C5 154 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 ADH1BP00325 375 aa13.46□□□□□ -0.26
BRAT1-203ENST00000467558 SERPINA1P01009 418 aa13.46□□□□□ -0.26
BRAT1-203ENST00000467558 CHRM1P11229 460 aaPredicted RBP13.46□□□□□ -0.26
BRAT1-203ENST00000467558 LAMP2P13473 410 aa13.46□□□□□ -0.26
BRAT1-203ENST00000467558 LBX1P52954 281 aa13.46□□□□□ -0.26
BRAT1-203ENST00000467558 HKDC1Q2TB90 917 aa13.46□□□□□ -0.26
BRAT1-203ENST00000467558 DGKKQ5KSL6 1271 aa13.46□□□□□ -0.26
BRAT1-203ENST00000467558 EOGTQ5NDL2 527 aa13.46□□□□□ -0.26
BRAT1-203ENST00000467558 UBAP2Q5T6F2 1119 aaKnown RBP13.46□□□□□ -0.26
BRAT1-203ENST00000467558 TMEM214Q6NUQ4 689 aaKnown RBP13.46□□□□□ -0.26
BRAT1-203ENST00000467558 TMIGD1Q6UXZ0 262 aa13.46□□□□□ -0.26
BRAT1-203ENST00000467558 PTCHD4Q6ZW05 846 aa13.46□□□□□ -0.26
BRAT1-203ENST00000467558 TREML1Q86YW5 311 aa13.46□□□□□ -0.26
BRAT1-203ENST00000467558 CANT1Q8WVQ1 401 aa13.46□□□□□ -0.26
BRAT1-203ENST00000467558 SCRN2Q96FV2 425 aa13.46□□□□□ -0.26
BRAT1-203ENST00000467558 NUAK2Q9H093 628 aa13.46□□□□□ -0.26
BRAT1-203ENST00000467558 EBF2Q9HAK2 575 aa13.46□□□□□ -0.26
BRAT1-203ENST00000467558 RSL24D1Q9UHA3 163 aaKnown RBP13.46□□□□□ -0.26
BRAT1-203ENST00000467558 SAP18O00422 153 aaKnown RBP13.45□□□□□ -0.26
BRAT1-203ENST00000467558 BCKDKO14874 412 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 CD70P32970 193 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 PREPP48147 710 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 GSK3BP49841 420 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 IFI44LQ53G44 452 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 C6orf136Q5SQH8 315 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 SNAP47Q5SQN1 464 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 GJD3Q8N144 294 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 OR8H2Q8N162 312 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 TSTD1Q8NFU3 115 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 OR9A1PQ8NGU1 263 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 WDR48Q8TAF3 677 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 RGMAQ96B86 450 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 RBM18Q96H35 190 aaKnown RBP13.45□□□□□ -0.26
BRAT1-203ENST00000467558 SLC38A3Q99624 504 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 TAC3Q9UHF0 121 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 MRTO4Q9UKD2 239 aaKnown RBP13.45□□□□□ -0.26
BRAT1-203ENST00000467558 MYO18AQ92614 2054 aaKnown RBP13.45□□□□□ -0.26
BRAT1-203ENST00000467558 FADS2P1A8MWK0 482 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 NPPAP01160 153 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 PAX7P23759 505 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 FEN1P39748 380 aaKnown RBP13.45□□□□□ -0.26
BRAT1-203ENST00000467558 AQP4P55087 323 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 DEFB103AP81534 67 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 PTSQ03393 145 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 SLC5A9Q2M3M2 681 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 KIAA0319Q5VV43 1072 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 TAS1R1Q7RTX1 841 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 GALNT5Q7Z7M9 940 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 ZCCHC10Q8TBK6 192 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 TRMT2BQ96GJ1 504 aaKnown RBP13.45□□□□□ -0.26
BRAT1-203ENST00000467558 ADI1Q9BV57 179 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 COQ10BQ9H8M1 238 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 MCM8Q9UJA3 840 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 HEPACAM2A8MVW5 462 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 AGRPO00253 132 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 STX11O75558 287 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 RGS8P57771 180 aaPredicted RBP13.45□□□□□ -0.26
BRAT1-203ENST00000467558 PDCD4Q53EL6 469 aaKnown RBP13.45□□□□□ -0.26
BRAT1-203ENST00000467558 UNC50Q53HI1 259 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 MPP7Q5T2T1 576 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 C10orf62Q5T681 223 aaPredicted RBP13.45□□□□□ -0.26
BRAT1-203ENST00000467558 ACTR3BQ9P1U1 418 aa13.45□□□□□ -0.26
BRAT1-203ENST00000467558 ARPC2O15144 300 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 SLC16A5O15375 505 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 NR2F6P10588 404 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms