RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 EEF1A1P5Q5VTE0 462 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 CES4AQ5XG92 561 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 GTF2H2CQ6P1K8 395 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 TMEM270Q6UE05 265 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 ZNF704Q6ZNC4 412 aaPredicted RBP3.59□□□□□ -1.83
VPS50-209ENST00000467326 MARK2Q7KZI7 788 aaKnown RBP3.59□□□□□ -1.83
VPS50-209ENST00000467326 SPATA19Q7Z5L4 167 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 KBTBD6Q86V97 674 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 FOXP4Q8IVH2 680 aaPredicted RBP3.59□□□□□ -1.83
VPS50-209ENST00000467326 CAMKVQ8NCB2 501 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 SLC24A4Q8NFF2 622 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 TSPAN14Q8NG11 270 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 RNF139Q8WU17 664 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 CORO2AQ92828 525 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 PTERQ96BW5 349 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 GIMAP5Q96F15 307 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 CNOT6LQ96LI5 555 aaKnown RBP3.59□□□□□ -1.83
VPS50-209ENST00000467326 LRRC1Q9BTT6 524 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 ST6GALNAC4Q9H4F1 302 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 DNAJC18Q9H819 358 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 HMG20BQ9P0W2 317 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 STK39Q9UEW8 545 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 CLCA3PQ9Y6N3 262 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.59□□□□□ -1.83
VPS50-209ENST00000467326 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 ANXA2P2A6NMY6 339 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 ENO4A6NNW6 628 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 FAM72CH0Y354 149 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 ANGPT2O15123 496 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 MAGEB3O15480 346 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 AVILO75366 819 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 E2F6O75461 281 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 PENKP01210 267 aaPredicted RBP3.58□□□□□ -1.84
VPS50-209ENST00000467326 FAM106CPP0CH98 169 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 TSPY4P0CV99 314 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 TSPY10P0CW01 314 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 HSPA5P11021 654 aaKnown RBP3.58□□□□□ -1.84
VPS50-209ENST00000467326 GABRB1P18505 474 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 HOXD10P28358 340 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 RDXP35241 583 aaKnown RBP3.58□□□□□ -1.84
VPS50-209ENST00000467326 APOBEC1P41238 236 aaKnown RBP3.58□□□□□ -1.84
VPS50-209ENST00000467326 PRKCIP41743 596 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 RABIFP47224 123 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 CAMLGP49069 296 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 HOXA1P49639 335 aaPredicted RBP3.58□□□□□ -1.84
VPS50-209ENST00000467326 CCR3P51677 355 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 CLDN20P56880 219 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 BEX3Q00994 111 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 RUNX1T1Q06455 604 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 GRIK2Q13002 908 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 DMP1Q13316 513 aaPredicted RBP3.58□□□□□ -1.84
VPS50-209ENST00000467326 MXD4Q14582 209 aaPredicted RBP3.58□□□□□ -1.84
VPS50-209ENST00000467326 PDSS1Q5T2R2 415 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 FAM72AQ5TYM5 149 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 PMS2CLQ68D20 193 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 C18orf63Q68DL7 685 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 OR7E24Q6IFN5 339 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 FAM72DQ6L9T8 149 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 SLC25A24Q6NUK1 477 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 PAPD4Q6PIY7 484 aaKnown RBP3.58□□□□□ -1.84
VPS50-209ENST00000467326 MFSD7Q6UXD7 560 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 RBPMS2Q6ZRY4 209 aaKnown RBP3.58□□□□□ -1.84
VPS50-209ENST00000467326 SEPT14Q6ZU15 432 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 SLC26A9Q7LBE3 791 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 SPATA21Q7Z572 469 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 IQCHQ86VS3 1027 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 TMPRSS12Q86WS5 348 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 FAM72BQ86X60 149 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 CNTN4Q8IWV2 1026 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 CLYBLQ8N0X4 340 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 FBXW8Q8N3Y1 598 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 AFAP1Q8N556 730 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 XXYLT1Q8NBI6 393 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 LPCAT1Q8NF37 534 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 TMEM255BQ8WV15 326 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 SLC44A1Q8WWI5 657 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 SLC5A11Q8WWX8 675 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 TEKT1Q969V4 418 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 MOAP1Q96BY2 351 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 SGF29Q96ES7 293 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 C1orf74Q96LT6 269 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 FAM210AQ96ND0 272 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 GAD1Q99259 594 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 NEURL2Q9BR09 285 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 ACPTQ9BZG2 426 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 STMN4Q9H169 189 aaPredicted RBP3.58□□□□□ -1.84
VPS50-209ENST00000467326 RANGRFQ9HD47 186 aaPredicted RBP3.58□□□□□ -1.84
VPS50-209ENST00000467326 TRPV5Q9NQA5 729 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 CYP39A1Q9NYL5 469 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.58□□□□□ -1.84
VPS50-209ENST00000467326 TMOD2Q9NZR1 351 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 OGFRQ9NZT2 677 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 SEPT10Q9P0V9 454 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 VPS18Q9P253 973 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 CLIP2Q9UDT6 1046 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 FBXL17Q9UF56 701 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 OR14J1Q9UGF5 321 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 SUN2Q9UH99 717 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 CCPG1Q9ULG6 757 aa3.58□□□□□ -1.84
VPS50-209ENST00000467326 STX8Q9UNK0 236 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms