RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 RFC3P40938 356 aa11.92□□□□□ -0.5
UBR4-210ENST00000466969 PTH2RP49190 550 aa11.92□□□□□ -0.5
UBR4-210ENST00000466969 CDH6P55285 790 aa11.92□□□□□ -0.5
UBR4-210ENST00000466969 RABEP1Q15276 862 aa11.92□□□□□ -0.5
UBR4-210ENST00000466969 BTBD16Q32M84 506 aa11.92□□□□□ -0.5
UBR4-210ENST00000466969 TAF3Q5VWG9 929 aa11.92□□□□□ -0.5
UBR4-210ENST00000466969 RFX8Q6ZV50 586 aa11.92□□□□□ -0.5
UBR4-210ENST00000466969 CRLF3Q8IUI8 442 aa11.92□□□□□ -0.5
UBR4-210ENST00000466969 AMER2Q8N7J2 671 aa11.92□□□□□ -0.5
UBR4-210ENST00000466969 RASGEF1AQ8N9B8 481 aa11.92□□□□□ -0.5
UBR4-210ENST00000466969 SMPDL3BQ92485 455 aa11.92□□□□□ -0.5
UBR4-210ENST00000466969 ZNF653Q96CK0 615 aa11.92□□□□□ -0.5
UBR4-210ENST00000466969 LCORQ96JN0 433 aaPredicted RBP11.92□□□□□ -0.5
UBR4-210ENST00000466969 IMMP1LQ96LU5 166 aa11.92□□□□□ -0.5
UBR4-210ENST00000466969 RMDN2Q96LZ7 410 aa11.92□□□□□ -0.5
UBR4-210ENST00000466969 NRTNQ99748 197 aa11.92□□□□□ -0.5
UBR4-210ENST00000466969 C11orf70Q9BRQ4 267 aa11.92□□□□□ -0.5
UBR4-210ENST00000466969 XKR8Q9H6D3 395 aa11.92□□□□□ -0.5
UBR4-210ENST00000466969 PLSCR2Q9NRY7 297 aa11.92□□□□□ -0.5
UBR4-210ENST00000466969 EIF3LQ9Y262 564 aaKnown RBP11.92□□□□□ -0.5
UBR4-210ENST00000466969 FAM215AQ9Y5M1 114 aa11.92□□□□□ -0.5
UBR4-210ENST00000466969 LOC102723996A0A087X1L8 192 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 MGAT4DA6NG13 374 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 ANKRD66B4E2M5 251 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 DVL2O14641 736 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 CCP110O43303 1012 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 MAFKO60675 156 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 POLBP06746 335 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 CES1P23141 567 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 NR1H2P55055 460 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 APBA1Q02410 837 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 QPCTQ16769 361 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 ATP13A5Q4VNC0 1218 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 TCTE1Q5JU00 501 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 WIPI1Q5MNZ9 446 aaPredicted RBP11.91□□□□□ -0.5
UBR4-210ENST00000466969 LIPNQ5VXI9 398 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 NAA35Q5VZE5 725 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 H3F3CQ6NXT2 135 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 ATPAF2Q8N5M1 289 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 MEIOBQ8N635 442 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 CREB3L4Q8TEY5 395 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 EID2BQ96D98 161 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 OR2A14Q96R47 310 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 PLCD4Q9BRC7 762 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 CCM2Q9BSQ5 444 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 CRACR2AQ9BSW2 395 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 YIPF2Q9BWQ6 316 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 XPO4Q9C0E2 1151 aaKnown RBP11.91□□□□□ -0.5
UBR4-210ENST00000466969 DHX35Q9H5Z1 703 aaKnown RBP11.91□□□□□ -0.5
UBR4-210ENST00000466969 TMPRSS11EQ9UL52 423 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 SHOC2Q9UQ13 582 aa11.91□□□□□ -0.5
UBR4-210ENST00000466969 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.91□□□□□ -0.5
UBR4-210ENST00000466969 ZNF407Q9C0G0 2248 aa11.9□□□□□ -0.5
UBR4-210ENST00000466969 A0A1B0GVL5 298 aa11.9□□□□□ -0.5
UBR4-210ENST00000466969 KLHL33A6NCF5 533 aa11.9□□□□□ -0.5
UBR4-210ENST00000466969 KLRC4-KLRK1H3BQV0 150 aa11.9□□□□□ -0.5
UBR4-210ENST00000466969 FOXN3O00409 490 aaPredicted RBP11.9□□□□□ -0.5
UBR4-210ENST00000466969 BCKDKO14874 412 aa11.9□□□□□ -0.5
UBR4-210ENST00000466969 PNMA6AP0CW24 399 aaPredicted RBP11.9□□□□□ -0.5
UBR4-210ENST00000466969 PFKFB1P16118 471 aa11.9□□□□□ -0.5
UBR4-210ENST00000466969 BMP5P22003 454 aa11.9□□□□□ -0.5
UBR4-210ENST00000466969 FBLP22087 321 aaKnown RBP11.9□□□□□ -0.5
UBR4-210ENST00000466969 MCM3P25205 808 aa11.9□□□□□ -0.5
UBR4-210ENST00000466969 SOX5P35711 763 aa11.9□□□□□ -0.5
UBR4-210ENST00000466969 DSC2Q02487 901 aa11.9□□□□□ -0.5
UBR4-210ENST00000466969 TAZQ16635 292 aa11.9□□□□□ -0.5
UBR4-210ENST00000466969 FBXL19-AS1Q494R0 122 aa11.9□□□□□ -0.5
UBR4-210ENST00000466969 FNBP1LQ5T0N5 605 aa11.9□□□□□ -0.5
UBR4-210ENST00000466969 RIPPLY2Q5TAB7 128 aa11.9□□□□□ -0.5
UBR4-210ENST00000466969 PRMT9Q6P2P2 845 aa11.9□□□□□ -0.5
UBR4-210ENST00000466969 OR2L2Q8NH16 312 aa11.9□□□□□ -0.5
UBR4-210ENST00000466969 SCN2AQ99250 2005 aa11.9□□□□□ -0.5
UBR4-210ENST00000466969 SELENOOQ9BVL4 669 aa11.9□□□□□ -0.5
UBR4-210ENST00000466969 AP4E1Q9UPM8 1137 aa11.9□□□□□ -0.5
UBR4-210ENST00000466969 TTLL3Q9Y4R7 772 aa11.9□□□□□ -0.5
UBR4-210ENST00000466969 KMT2CQ8NEZ4 4911 aaKnown RBP11.89□□□□□ -0.51
UBR4-210ENST00000466969 IGLV3-12A0A075B6K2 115 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 HSPB2A8KAH6 182 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 DESP17661 470 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 SLC9A1P19634 815 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 NOMO3P69849 1222 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 HSPB2Q16082 182 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 ACKR1Q16570 336 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 LONRF2Q1L5Z9 754 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 LDLRAP1Q5SW96 308 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 PLAG1Q6DJT9 500 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 WDR59Q6PJI9 974 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 DTWD1Q8N5C7 304 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 SLC5A8Q8N695 610 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 RELL2Q8NC24 303 aaPredicted RBP11.89□□□□□ -0.51
UBR4-210ENST00000466969 OR52N2Q8NGI0 321 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 C16orf52Q8NHV5 167 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 PPP1R14CQ8TAE6 165 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 ADGRE3Q9BY15 652 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 GPR63Q9BZJ6 419 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 THAP2Q9H0W7 228 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 DEFB127Q9H1M4 99 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 UBTD1Q9HAC8 227 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 C14orf105Q9NVL8 296 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 HAUS2Q9NVX0 235 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms