RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 CLDN24A6NM45 220 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 LOC730098B7Z3J9 87 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 F5H5T6 163 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 H3BNC9 293 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 H7C0S8 307 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 WNT9AO14904 365 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 TLR5O60602 858 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 KCNK2O95069 426 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 PRAMEF12O95522 483 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 PAX3P23760 479 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 PRSS36Q5K4E3 855 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 COLEC12Q5KU26 742 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 CYP2U1Q7Z449 544 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 GALNT10Q86SR1 603 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 TXNDC15Q96J42 360 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 APOL4Q9BPW4 351 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 ZBTB20Q9HC78 741 aaPredicted RBP12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 TM9SF3Q9HD45 589 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 IL1RAPQ9NPH3 570 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 OLA1Q9NTK5 396 aaKnown RBP12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 ZFP37Q9Y6Q3 630 aaPredicted RBP12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 PABPN1LA6NDY0 278 aaKnown RBP12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 hCG_2039718K7EN88 272 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 KDELR3O43731 214 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 SPNP16150 400 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 LIPAP38571 399 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 RPS24P62847 133 aaKnown RBP12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 RING1Q06587 406 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 IRF5Q13568 498 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 SYT16Q17RD7 645 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 PLEKHG6Q3KR16 790 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 C5orf22Q49AR2 442 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 FAM171A1Q5VUB5 890 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 STEAP3Q658P3 488 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 RNF165Q6ZSG1 346 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 AHSA2Q719I0 299 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 APH1BQ8WW43 257 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 MTFMTQ96DP5 389 aaKnown RBP12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 APOL5Q9BWW9 433 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 CD244Q9BZW8 370 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 CIPCQ9C0C6 399 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 SIRT5Q9NXA8 310 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 PDP1Q9P0J1 537 aaPredicted RBP12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 PPT2Q9UMR5 302 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 ATP11BQ9Y2G3 1177 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 OARD1Q9Y530 152 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 ANGPTL3Q9Y5C1 460 aa12.67□□□□□ -0.38
PDZRN3-205ENST00000466780 NUP214P35658 2090 aaPredicted RBP12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 METTL15A6NJ78 407 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 TBX1O43435 398 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 PCDHGA12O60330 932 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 EFNA1P20827 205 aaPredicted RBP12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 SEPHS1P49903 392 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 FKBP1BP68106 108 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 VLDLRP98155 873 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 CREMQ03060 361 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 ABHD18Q0P651 414 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 GPR162Q16538 588 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 NFE2Q16621 373 aaPredicted RBP12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 UBE2UQ5VVX9 321 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 SERINC5Q86VE9 423 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 USP7Q93009 1102 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 EGFL8Q99944 293 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 BOCQ9BWV1 1114 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 EHD1Q9H4M9 534 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 CCNB1IP1Q9NPC3 277 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 TLR8Q9NR97 1041 aaKnown RBP12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 GPRC5BQ9NZH0 403 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 PCDHB5Q9Y5E4 795 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 ISPDA4D126 451 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 WDR47O94967 919 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 SEMG1P04279 462 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 AKR1A1P14550 325 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 HOXB6P17509 224 aaKnown RBP12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 FPR1P21462 350 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 TACR1P25103 407 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 DNAJA1P31689 397 aaKnown RBP12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 S100A3P33764 101 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 THPOP40225 353 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 PCYT1AP49585 367 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 RPS14P62263 151 aaKnown RBP12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 LRIT3Q3SXY7 679 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 ZNF404Q494X3 552 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 VTCN1Q7Z7D3 282 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 TSPYL5Q86VY4 417 aaPredicted RBP12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 TMEM132CQ8N3T6 1108 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 FAM83FQ8NEG4 500 aaPredicted RBP12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 SLC38A4Q969I6 547 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 ACPTQ9BZG2 426 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 ANKHQ9HCJ1 492 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 WWOXQ9NZC7 414 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 IL17CQ9P0M4 197 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 KLHL3Q9UH77 587 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 SAMD4AQ9UPU9 718 aaKnown RBP12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 Q9Y3F1 56 aa12.66□□□□□ -0.38
PDZRN3-205ENST00000466780 AGAP5A6NIR3 686 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 H0Y626 953 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 M0R082 166 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 MRPS14O60783 128 aaKnown RBP12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 CCNDBP1O95273 360 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms