RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 HIST1H2AHQ96KK5 128 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 CCDC138Q96M89 665 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 TEFMQ96QE5 360 aaKnown RBP14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 HIST1H2AJQ99878 128 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 ZPBPQ9BS86 351 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 H2AFJQ9BTM1 129 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 KLHL25Q9H0H3 589 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 ANKZF1Q9H8Y5 726 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 APMAPQ9HDC9 416 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 PDE7BQ9NP56 450 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 FOXJ2Q9P0K8 574 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 ZMIZ1Q9ULJ6 1067 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 PDE10AQ9Y233 779 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 BTRCQ9Y297 605 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 RAXQ9Y2V3 346 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 PCM1Q15154 2024 aa14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 ANKRD11Q6UB99 2663 aaPredicted RBP14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 URB1O60287 2271 aaKnown RBP14.01□□□□□ -0.17
SQSTM1-205ENST00000464493 ANKRD12Q6UB98 2062 aa14□□□□□ -0.17
SQSTM1-205ENST00000464493 PHGDHO43175 533 aaKnown RBP14□□□□□ -0.17
SQSTM1-205ENST00000464493 WISP3O95389 354 aaPredicted RBP14□□□□□ -0.17
SQSTM1-205ENST00000464493 MYBL2P10244 700 aa14□□□□□ -0.17
SQSTM1-205ENST00000464493 CD82P27701 267 aa14□□□□□ -0.17
SQSTM1-205ENST00000464493 OAS2P29728 719 aaKnown RBP14□□□□□ -0.17
SQSTM1-205ENST00000464493 RAB10P61026 200 aa14□□□□□ -0.17
SQSTM1-205ENST00000464493 ZKSCAN8Q15776 578 aaPredicted RBP14□□□□□ -0.17
SQSTM1-205ENST00000464493 MROH9Q5TGP6 573 aa14□□□□□ -0.17
SQSTM1-205ENST00000464493 BPHLQ86WA6 291 aaPredicted RBP14□□□□□ -0.17
SQSTM1-205ENST00000464493 FAM20CQ8IXL6 584 aa14□□□□□ -0.17
SQSTM1-205ENST00000464493 ZNF248Q8NDW4 579 aa14□□□□□ -0.17
SQSTM1-205ENST00000464493 UHMK1Q8TAS1 419 aaKnown RBP14□□□□□ -0.17
SQSTM1-205ENST00000464493 ZNF480Q8WV37 535 aa14□□□□□ -0.17
SQSTM1-205ENST00000464493 ANKRD49Q8WVL7 239 aa14□□□□□ -0.17
SQSTM1-205ENST00000464493 SLC44A1Q8WWI5 657 aa14□□□□□ -0.17
SQSTM1-205ENST00000464493 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14□□□□□ -0.173e-7■■■■■ 32.1
SQSTM1-205ENST00000464493 SMPDL3AQ92484 453 aa14□□□□□ -0.17
SQSTM1-205ENST00000464493 TCTN2Q96GX1 697 aa14□□□□□ -0.17
SQSTM1-205ENST00000464493 TRIM54Q9BYV2 358 aa14□□□□□ -0.17
SQSTM1-205ENST00000464493 TXLNGYQ9BZA5 131 aa14□□□□□ -0.17
SQSTM1-205ENST00000464493 ACSL6Q9UKU0 697 aa14□□□□□ -0.17
SQSTM1-205ENST00000464493 ADAMTS20P59510 1910 aa14□□□□□ -0.17
SQSTM1-205ENST00000464493 SNRNP200O75643 2136 aaKnown RBP13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 A0A1W2PPV9 198 aa13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 PABPN1LA6NDY0 278 aaKnown RBP13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 E7ENX8 843 aa13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 RIPK2O43353 540 aa13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 FKBP9O95302 570 aa13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 INHBAP08476 426 aa13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 ABHD2P08910 425 aa13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 ENO2P09104 434 aaPredicted RBP13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 CCDC166P0CW27 439 aa13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 FGF5P12034 268 aa13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 EIF2S3P41091 472 aaKnown RBP13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 TAP2Q03519 686 aa13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 TUBB3Q13509 450 aa13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 TSTA3Q13630 321 aaPredicted RBP13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 PHKG1Q16816 387 aa13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 ST3GAL2Q16842 350 aa13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 SUSD1Q6UWL2 747 aa13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 RAPH1Q70E73 1250 aa13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 PPP1R3BQ86XI6 285 aa13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 SYTL1Q8IYJ3 562 aa13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 C19orf47Q8N9M1 422 aaKnown RBP13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 PPFIBP2Q8ND30 876 aa13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 OR2A1Q8NGT9 310 aa13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 DERL2Q9GZP9 239 aa13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 FGF21Q9NSA1 209 aa13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 INTS7Q9NVH2 962 aaKnown RBP13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 IKZF3Q9UKT9 509 aa13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 RARRES3Q9UL19 164 aa13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 NOVA2Q9UNW9 492 aaKnown RBP13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 IKBKGQ9Y6K9 419 aa13.99□□□□□ -0.17
SQSTM1-205ENST00000464493 HMX2A2RU54 273 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 POC1B-GALNT4F8VUJ3 575 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 CDC7O00311 574 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 RRP8O43159 456 aaKnown RBP13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 MSL3P1P0C860 447 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 PSMB5P28074 263 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 IMPA1P29218 277 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 CRABP2P29373 138 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 RPA3P35244 121 aaPredicted RBP13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 MSH2P43246 934 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 AP1S2P56377 157 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 BMPR2Q13873 1038 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 GPR19Q15760 415 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 ZIC1Q15915 447 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.98□□□□□ -0.178e-7■■□□□ 14.1
SQSTM1-205ENST00000464493 KIAA1614Q5VZ46 1190 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 FIGLAQ6QHK4 219 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 SBSNQ6UWP8 590 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 CMC1Q7Z7K0 106 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 ZFAND4Q86XD8 727 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 SPATA6LQ8N4H0 392 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 OR2L3Q8NG85 312 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 OR8K5Q8NH50 307 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 KCNE4Q8WWG9 221 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 ZUFSPQ96AP4 578 aa13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 ZNF501Q96CX3 271 aaPredicted RBP13.98□□□□□ -0.17
SQSTM1-205ENST00000464493 NAF1Q96HR8 494 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms