RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 NEK11Q8NG66 645 aa3.78□□□□□ -1.8
ITGB1-208ENST00000464001 PSPC1Q8WXF1 523 aaKnown RBP3.78□□□□□ -1.8
ITGB1-208ENST00000464001 SHC3Q92529 594 aa3.78□□□□□ -1.8
ITGB1-208ENST00000464001 ZKSCAN4Q969J2 545 aaPredicted RBP3.78□□□□□ -1.8
ITGB1-208ENST00000464001 C1orf74Q96LT6 269 aa3.78□□□□□ -1.8
ITGB1-208ENST00000464001 NEK1Q96PY6 1258 aa3.78□□□□□ -1.8
ITGB1-208ENST00000464001 OPRPNQ99935 248 aaPredicted RBP3.78□□□□□ -1.8
ITGB1-208ENST00000464001 SLC5A7Q9GZV3 580 aa3.78□□□□□ -1.8
ITGB1-208ENST00000464001 RAD21L1Q9H4I0 556 aa3.78□□□□□ -1.8
ITGB1-208ENST00000464001 TRPC7Q9HCX4 862 aa3.78□□□□□ -1.8
ITGB1-208ENST00000464001 IL1RAPL2Q9NP60 686 aa3.78□□□□□ -1.8
ITGB1-208ENST00000464001 MBNL1Q9NR56 388 aaKnown RBP3.78□□□□□ -1.8
ITGB1-208ENST00000464001 STK39Q9UEW8 545 aa3.78□□□□□ -1.8
ITGB1-208ENST00000464001 IL19Q9UHD0 177 aa3.78□□□□□ -1.8
ITGB1-208ENST00000464001 INTS6Q9UL03 887 aaKnown RBP3.78□□□□□ -1.8
ITGB1-208ENST00000464001 PPIEQ9UNP9 301 aaKnown RBP3.78□□□□□ -1.8
ITGB1-208ENST00000464001 RNF103-CHMP3A0A140T963 221 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 SYCE3A1L190 88 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 ZSCAN5CA6NGD5 496 aaPredicted RBP3.77□□□□□ -1.81
ITGB1-208ENST00000464001 UBXN8O00124 270 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 AP3B1O00203 1094 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 RNF103O00237 685 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 PAGE4O60829 102 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 NOL3O60936 208 aaKnown RBP3.77□□□□□ -1.81
ITGB1-208ENST00000464001 PEX11AO75192 247 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 RTN2O75298 545 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 CRLF1O75462 422 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 ZNF821O75541 412 aaPredicted RBP3.77□□□□□ -1.81
ITGB1-208ENST00000464001 TFAP2AP05549 437 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 FYNP06241 537 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 MSH3P20585 1137 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 DEKP35659 375 aaKnown RBP3.77□□□□□ -1.81
ITGB1-208ENST00000464001 CASP3P42574 277 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 NOVP48745 357 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 CAMLGP49069 296 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 HNMTP50135 292 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 BMXP51813 675 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 CASP9P55211 416 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 MBTD1Q05BQ5 628 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 SCN1BQ07699 218 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 GOLGA8DPQ0D2H9 430 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 COX10Q12887 443 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 IL11RAQ14626 422 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 ANKRD20A4Q4UJ75 823 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 ANKRD20A8PQ5CZ79 823 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 CXorf66Q5JRM2 361 aaPredicted RBP3.77□□□□□ -1.81
ITGB1-208ENST00000464001 ANKRD20A2Q5SQ80 823 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 CCDC183Q5T5S1 534 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 ANKRD20A1Q5TYW2 823 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 ANKRD20A3Q5VUR7 823 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 FAAP20Q6NZ36 180 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 TSSK4Q6SA08 328 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 PACS1Q6VY07 963 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 RBPMS2Q6ZRY4 209 aaKnown RBP3.77□□□□□ -1.81
ITGB1-208ENST00000464001 AACSQ86V21 672 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 HOOK3Q86VS8 718 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 HDDC3Q8N4P3 179 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 MINDY1Q8N5J2 469 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 RTL3Q8N8U3 475 aaKnown RBP3.77□□□□□ -1.81
ITGB1-208ENST00000464001 GMCL1P1Q8NEA9 526 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 DDHD1Q8NEL9 900 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 BRSK1Q8TDC3 778 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 PPP4R1Q8TF05 950 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 SMARCE1Q969G3 411 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 LRRC59Q96AG4 307 aaKnown RBP3.77□□□□□ -1.81
ITGB1-208ENST00000464001 PGAM5Q96HS1 289 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 ATOH8Q96SQ7 321 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 TRIM7Q9C029 511 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 PDZD7Q9H5P4 517 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 FGF22Q9HCT0 170 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 CNIH4Q9P003 139 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 SEC63Q9UGP8 760 aaKnown RBP3.77□□□□□ -1.81
ITGB1-208ENST00000464001 OSGIN1Q9UJX0 560 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 APPL1Q9UKG1 709 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 AURKCQ9UQB9 309 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 RPH3AQ9Y2J0 694 aaPredicted RBP3.77□□□□□ -1.81
ITGB1-208ENST00000464001 SESN1Q9Y6P5 492 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 MAU2Q9Y6X3 613 aa3.77□□□□□ -1.81
ITGB1-208ENST00000464001 EIF4G1Q04637 1599 aaKnown RBP3.76□□□□□ -1.81
ITGB1-208ENST00000464001 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 C5orf60A6NFR6 353 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 A6NL46 340 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 C2orf81A6NN90 581 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 ENO4A6NNW6 628 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 C15orf62A8K5M9 175 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 TMEM178BH3BS89 294 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 CACNB4O00305 520 aaPredicted RBP3.76□□□□□ -1.81
ITGB1-208ENST00000464001 PAPSS1O43252 624 aaPredicted RBP3.76□□□□□ -1.81
ITGB1-208ENST00000464001 JRKO75564 520 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 TSHBP01222 138 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 PLA2G4BP0C869 781 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 GZMAP12544 262 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 ERCC2P18074 760 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 GNAZP19086 355 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 TRIM21P19474 475 aaKnown RBP3.76□□□□□ -1.81
ITGB1-208ENST00000464001 IL10P22301 178 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 MAP2K2P36507 400 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 MATR3P43243 847 aaKnown RBP eCLIP3.76□□□□□ -1.81
ITGB1-208ENST00000464001 PSMC4P43686 418 aa3.76□□□□□ -1.81
ITGB1-208ENST00000464001 IFNAR2P48551 515 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms