RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 PPM1MQ96MI6 270 aa11.4□□□□□ -0.58
CPNE1-221ENST00000462352 GPR78Q96P69 363 aa11.4□□□□□ -0.58
CPNE1-221ENST00000462352 OR2A14Q96R47 310 aa11.4□□□□□ -0.58
CPNE1-221ENST00000462352 CD180Q99467 661 aa11.4□□□□□ -0.58
CPNE1-221ENST00000462352 MAP3K3Q99759 626 aa11.4□□□□□ -0.58
CPNE1-221ENST00000462352 TMEM109Q9BVC6 243 aa11.4□□□□□ -0.58
CPNE1-221ENST00000462352 SCNM1Q9BWG6 230 aa11.4□□□□□ -0.58
CPNE1-221ENST00000462352 STRADBQ9C0K7 418 aa11.4□□□□□ -0.58
CPNE1-221ENST00000462352 PCMTD2Q9NV79 361 aa11.4□□□□□ -0.58
CPNE1-221ENST00000462352 ZNF358Q9NW07 568 aa11.4□□□□□ -0.58
CPNE1-221ENST00000462352 STOX2Q9P2F5 926 aaPredicted RBP11.4□□□□□ -0.58
CPNE1-221ENST00000462352 LGALS13Q9UHV8 139 aa11.4□□□□□ -0.58
CPNE1-221ENST00000462352 RNF112Q9ULX5 631 aa11.4□□□□□ -0.58
CPNE1-221ENST00000462352 IGHV5-51A0A0C4DH38 117 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 A0A1W2PPM1 405 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 TLCD2A6NGC4 264 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 NCF1BA6NI72 391 aaPredicted RBP11.39□□□□□ -0.59
CPNE1-221ENST00000462352 NCF1CA8MVU1 366 aaPredicted RBP11.39□□□□□ -0.59
CPNE1-221ENST00000462352 GOLGA8RI6L899 631 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 AGRPO00253 132 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 HGSO14964 777 aaPredicted RBP11.39□□□□□ -0.59
CPNE1-221ENST00000462352 MT-ND3P03897 115 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 ANXA5P08758 320 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 ANKRD34CP0C6C1 535 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 NCF1P14598 390 aaPredicted RBP11.39□□□□□ -0.59
CPNE1-221ENST00000462352 SPINK2P20155 84 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 CDH3P22223 829 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 PSMB5P28074 263 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 OAS2P29728 719 aaKnown RBP11.39□□□□□ -0.59
CPNE1-221ENST00000462352 LSSP48449 732 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 KCNC1P48547 511 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 CDKL1Q00532 357 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 ZNF844Q08AG5 666 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 C16orf72Q14CZ0 275 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 TGFBIQ15582 683 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 ZXDCQ2QGD7 858 aaPredicted RBP11.39□□□□□ -0.59
CPNE1-221ENST00000462352 TSNAXIP1Q2TAA8 658 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 CACHD1Q5VU97 1274 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 KLC3Q6P597 504 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 AGTRAPQ6RW13 159 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 SUSD1Q6UWL2 747 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 TRIM73Q86UV7 250 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 GPSM1Q86YR5 675 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 RHEBL1Q8TAI7 183 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 ACMSDQ8TDX5 336 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 ATL1Q8WXF7 558 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 SLC22A18Q96BI1 424 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 FBXL8Q96CD0 374 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 LIN37Q96GY3 246 aaPredicted RBP11.39□□□□□ -0.59
CPNE1-221ENST00000462352 ZIM3Q96PE6 472 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 ATOH8Q96SQ7 321 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 EGFL8Q99944 293 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 PITPNM3Q9BZ71 974 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 ATG10Q9H0Y0 220 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 ZNF768Q9H5H4 540 aaKnown RBP11.39□□□□□ -0.59
CPNE1-221ENST00000462352 C1GALT1Q9NS00 363 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 ARGLU1Q9NWB6 273 aaPredicted RBP11.39□□□□□ -0.59
CPNE1-221ENST00000462352 SEMA5BQ9P283 1151 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 KLK13Q9UKR3 277 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 PTPRBP23467 1997 aa11.39□□□□□ -0.59
CPNE1-221ENST00000462352 CCDC187A0A096LP49 1063 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 A0A0J9YY10 115 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 CCDC189A1A4V9 331 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 KERAO60938 352 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 PYGBP11216 843 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 H2AFXP16104 143 aaPredicted RBP11.38□□□□□ -0.59
CPNE1-221ENST00000462352 CSTF2P33240 577 aaKnown RBP eCLIP11.38□□□□□ -0.59
CPNE1-221ENST00000462352 RPA3P35244 121 aaPredicted RBP11.38□□□□□ -0.59
CPNE1-221ENST00000462352 SEPHS1P49903 392 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 TBPL1P62380 186 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 NAE1Q13564 534 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 TSTA3Q13630 321 aaPredicted RBP11.38□□□□□ -0.59
CPNE1-221ENST00000462352 SLC5A12Q1EHB4 618 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 KRT71Q3SY84 523 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 TECRLQ5HYJ1 363 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 LRIG3Q6UXM1 1119 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 SH2D5Q6ZV89 423 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 RAB11FIP2Q7L804 512 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 FAM20CQ8IXL6 584 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 CARFQ8N187 725 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 OR2A1Q8NGT9 310 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 KLHL6Q8WZ60 621 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 EXT2Q93063 718 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 RHBDF1Q96CC6 855 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 TSNARE1Q96NA8 513 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 TRAPPC9Q96Q05 1148 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 ACAT2Q9BWD1 397 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 CCDC177Q9NQR7 707 aaPredicted RBP11.38□□□□□ -0.59
CPNE1-221ENST00000462352 ABCF3Q9NUQ8 709 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 CD274Q9NZQ7 290 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 PCDHB11Q9Y5F2 797 aa11.38□□□□□ -0.59
CPNE1-221ENST00000462352 NCOR2Q9Y618 2525 aa11.37□□□□□ -0.59
CPNE1-221ENST00000462352 A0A1W2PNU3 283 aaPredicted RBP11.37□□□□□ -0.59
CPNE1-221ENST00000462352 MED19A0JLT2 244 aaPredicted RBP11.37□□□□□ -0.59
CPNE1-221ENST00000462352 SLC9B1P1A6NJY1 282 aa11.37□□□□□ -0.59
CPNE1-221ENST00000462352 SYCE1LA8MT33 242 aa11.37□□□□□ -0.59
CPNE1-221ENST00000462352 RBP1P09455 135 aa11.37□□□□□ -0.59
CPNE1-221ENST00000462352 HGFP14210 728 aa11.37□□□□□ -0.59
CPNE1-221ENST00000462352 PVRP15151 417 aa11.37□□□□□ -0.59
CPNE1-221ENST00000462352 ST6GAL1P15907 406 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms