RNA–Protein interactions for RNA: ENST00000461044.5

FXR1-204, Transcript of FMR1 autosomal homolog 1, human

TSL 4

Gene FXR1, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-204	ENST00000461044	SMC6	Q96SB8	1091 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	CPNE1	Q99829	537 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	PKP2	Q99959	881 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	ANP32E	Q9BTT0	268 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	MSTO1	Q9BUK6	570 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	NPFFR1	Q9GZQ6	430 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	NYX	Q9GZU5	481 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	ISCU	Q9H1K1	167 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	RWDD1	Q9H446	243 aa	Predicted RBP	3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	AAMDC	Q9H7C9	122 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	SRD5A3	Q9H8P0	318 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	TBC1D17	Q9HA65	648 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	LMAN1L	Q9HAT1	526 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	SEBOX	Q9HB31	216 aa	Predicted RBP	3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	MOV10	Q9HCE1	1003 aa	Known RBP	3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	PALMD	Q9NP74	551 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	PDGFC	Q9NRA1	345 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	CYSLTR2	Q9NS75	346 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	HMG20B	Q9P0W2	317 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	FBXL5	Q9UKA1	691 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	RCOR1	Q9UKL0	485 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	SLC8A2	Q9UPR5	921 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	AURKC	Q9UQB9	309 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	LAMP3	Q9UQV4	416 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	STON1	Q9Y6Q2	735 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	KIF1B	O60333	1816 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	EYS	Q5T1H1	3165 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	RNF123	Q5XPI4	1314 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	KDR	P35968	1356 aa		3.11	□□□□□ -1.91
FXR1-204	ENST00000461044	AFDN	P55196	1824 aa	Known RBP	3.1	□□□□□ -1.91
FXR1-204	ENST00000461044		A0A1W2PPQ1	181 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	C17orf102	A2RUQ5	167 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	ANKUB1	A6NFN9	424 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	TMEM221	A6NGB7	291 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	YDJC	A8MPS7	323 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	FOXO6	A8MYZ6	492 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	TMEM189-UBE2V1	I3L0A0	370 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	T	O15178	435 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	CTDSPL	O15194	276 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	TTI1	O43156	1089 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	NDUFS4	O43181	175 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	AP5Z1	O43299	807 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	RIPK2	O43353	540 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	KIF1C	O43896	1103 aa	Known RBP	3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	UGDH	O60701	494 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	PRAF2	O60831	178 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	NOL3	O60936	208 aa	Known RBP	3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	CRCP	O75575	148 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	BCAR3	O75815	825 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	ACSL3	O95573	720 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	DIRAS3	O95661	229 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	MT-ATP6	P00846	226 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	PDGFB	P01127	241 aa	Predicted RBP	3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	LCK	P06239	509 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	PLA2G4B	P0C869	781 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	PDHB	P11177	359 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	VPREB1	P12018	145 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	NCF1	P14598	390 aa	Predicted RBP	3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	ACAT1	P24752	427 aa	Known RBP	3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	MPZ	P25189	248 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	CCND3	P30281	292 aa	Predicted RBP	3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	PITPNB	P48739	271 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	GSDMD	P57764	484 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	UBE2V1	Q13404	147 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	CEBPE	Q15744	281 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	UGCG	Q16739	394 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	MEP1A	Q16819	746 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	TWISTNB	Q3B726	338 aa	Predicted RBP	3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	MAJIN	Q3KP22	176 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	IQCC	Q4KMZ1	466 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	TAF1B	Q53T94	588 aa	Predicted RBP	3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	C12orf60	Q5U649	245 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	OR6B2	Q6IFH4	312 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	CASC4	Q6P4E1	433 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	B3GNT6	Q6ZMB0	384 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	PRSS42	Q7Z5A4	293 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	PIGW	Q7Z7B1	504 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	ADCK1	Q86TW2	530 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	GPSM1	Q86YR5	675 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	ADGRF4	Q8IZF3	695 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	APCDD1	Q8J025	514 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	RBFA	Q8N0V3	343 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	BEST3	Q8N1M1	668 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	GMCL1P1	Q8NEA9	526 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	OR1J2	Q8NGS2	313 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	EXD1	Q8NHP7	514 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	SMG7	Q92540	1137 aa	Known RBP	3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	RND1	Q92730	232 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	TMEM186	Q96B77	213 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	GTPBP2	Q9BX10	602 aa	Known RBP	3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	PRSS22	Q9GZN4	317 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	SPRTN	Q9H040	489 aa	Predicted RBP	3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	WNT5B	Q9H1J7	359 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	S1PR5	Q9H228	398 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	DPH5	Q9H2P9	285 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	FN3K	Q9H479	309 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	MAGIX	Q9H6Y5	334 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	DNAJC4	Q9NNZ3	241 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	MMP25	Q9NPA2	562 aa		3.1	□□□□□ -1.91
FXR1-204	ENST00000461044	SPAG4	Q9NPE6	437 aa		3.1	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms