RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 A0A096LPI6 279 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 E2F3O00716 465 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 PEX11BO96011 259 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 IL1RNP18510 177 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 ENDOUP21128 410 aaKnown RBP15.12■□□□□ 0.01
SSR4-206ENST00000460616 C21orf33P30042 268 aaPredicted RBP15.12■□□□□ 0.01
SSR4-206ENST00000460616 HOXC13P31276 330 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 HTR6P50406 440 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 STC1P52823 247 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 SLC10A7Q0GE19 358 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 KIAA1614Q5VZ46 1190 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 LETMD1Q6P1Q0 360 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 SNX20Q7Z614 316 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 NRARPQ7Z6K4 114 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 BLOC1S5Q8TDH9 187 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 HCAR2Q8TDS4 363 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 ZNF382Q96SR6 550 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 KATNAL1Q9BW62 490 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 CLPBQ9H078 707 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 LYVE1Q9Y5Y7 322 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 FAM25AB3EWG3 89 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 FAM25CB3EWG5 89 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 FAM25GB3EWG6 89 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 HHLA1C9JL84 531 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 CAPN5O15484 640 aaPredicted RBP15.12■□□□□ 0.01
SSR4-206ENST00000460616 PCDHGA12O60330 932 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 KRT6AP02538 564 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 KRT6BP04259 564 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 SLC2A4P14672 509 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 IGFBP6P24592 240 aaPredicted RBP15.12■□□□□ 0.01
SSR4-206ENST00000460616 HOXA9P31269 272 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 MAGEA11P43364 429 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 CSNK2BP67870 215 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 CREMQ03060 361 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 ACVR1Q04771 509 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 GPR50Q13585 617 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 PTGR1Q14914 329 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 LRRC26Q2I0M4 334 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 SOWAHCQ53LP3 525 aaPredicted RBP15.12■□□□□ 0.01
SSR4-206ENST00000460616 AFMIDQ63HM1 303 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 OR2T5Q6IEZ7 315 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 GDF6Q6KF10 455 aaPredicted RBP15.12■□□□□ 0.01
SSR4-206ENST00000460616 CCDC71Q8IV32 467 aaPredicted RBP15.12■□□□□ 0.01
SSR4-206ENST00000460616 PCSK9Q8NBP7 692 aaKnown RBP15.12■□□□□ 0.01
SSR4-206ENST00000460616 OR2T29Q8NH02 315 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 AGO3Q9H9G7 860 aaKnown RBP15.12■□□□□ 0.01
SSR4-206ENST00000460616 ERVK13-1Q9NX77 482 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 CD274Q9NZQ7 290 aa15.12■□□□□ 0.01
SSR4-206ENST00000460616 J3KR12 359 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 ICMTO60725 284 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 RPP40O75818 363 aaKnown RBP15.11■□□□□ 0.01
SSR4-206ENST00000460616 PRSS56P0CW18 603 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 KCNE1P15382 129 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 GRK5P34947 590 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 ETV6P41212 452 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 RPP38P78345 283 aaKnown RBP15.11■□□□□ 0.01
SSR4-206ENST00000460616 ELP6Q0PNE2 266 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 TBRG1Q3YBR2 411 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 ZNF517Q6ZMY9 492 aaPredicted RBP15.11■□□□□ 0.01
SSR4-206ENST00000460616 SLC46A3Q7Z3Q1 461 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 OR8H2Q8N162 312 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 OR13C4Q8NGS5 318 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 DNASE1L2Q92874 299 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 POP5Q969H6 163 aaKnown RBP15.11■□□□□ 0.01
SSR4-206ENST00000460616 FAM120BQ96EK7 910 aaKnown RBP15.11■□□□□ 0.01
SSR4-206ENST00000460616 Q96MT0 163 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 SDHCQ99643 169 aaPredicted RBP15.11■□□□□ 0.01
SSR4-206ENST00000460616 PDP1Q9P0J1 537 aaPredicted RBP15.11■□□□□ 0.01
SSR4-206ENST00000460616 ABCG2Q9UNQ0 655 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 AP3M1Q9Y2T2 418 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 MED16Q9Y2X0 877 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 MIA3Q5JRA6 1907 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 A0A1W2PQ45 241 aaPredicted RBP15.11■□□□□ 0.01
SSR4-206ENST00000460616 A0A1W2PQY0 241 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 C17orf102A2RUQ5 167 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 ATXN1LP0C7T5 689 aaKnown RBP15.11■□□□□ 0.01
SSR4-206ENST00000460616 HTR7P34969 479 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 MAGEA2P43356 314 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 HK3P52790 923 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 DDR2Q16832 855 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 GTDC1Q4AE62 458 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 MANEALQ5VSG8 457 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 ATG9BQ674R7 924 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 ZNF438Q7Z4V0 828 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 GPSM1Q86YR5 675 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 RAB43Q86YS6 212 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 P3H2Q8IVL5 708 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 TCAIMQ8N3R3 496 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 RTL3Q8N8U3 475 aaKnown RBP15.11■□□□□ 0.01
SSR4-206ENST00000460616 ANGPTL6Q8NI99 470 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 JPH3Q8WXH2 748 aaPredicted RBP15.11■□□□□ 0.01
SSR4-206ENST00000460616 TBC1D20Q96BZ9 403 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 NEDD4LQ96PU5 975 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 PHOX2BQ99453 314 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 GPR21Q99679 349 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 CCDC32Q9BV29 185 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 OR51E2Q9H255 320 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 RPRD1BQ9NQG5 326 aaKnown RBP15.11■□□□□ 0.01
SSR4-206ENST00000460616 KRT84Q9NSB2 600 aa15.11■□□□□ 0.01
SSR4-206ENST00000460616 C1orf109Q9NX04 203 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms