RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 CCDC110Q8TBZ0 833 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 NAT14Q8WUY8 206 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 CDKN2AIPNLQ96HQ2 116 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 MRFAP1L1Q96HT8 127 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 LMF1Q96S06 567 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 RANBP9Q96S59 729 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 LHPPQ9H008 270 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 ENAMQ9NRM1 1142 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 DHCR7Q9UBM7 475 aaKnown RBP7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 NOVA2Q9UNW9 492 aaKnown RBP7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 PCDHA3Q9Y5H8 950 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 FAM169AQ9Y6X4 670 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 NBPF19A0A087WUL8 3843 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 SLC5A10A0PJK1 596 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 MROH6A6NGR9 719 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 ERI2A8K979 691 aaKnown RBP7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 PCDH17O14917 1159 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 LRRTM2O43300 516 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 SRPX2O60687 465 aaPredicted RBP7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 USP1O94782 785 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 APOA4P06727 396 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 FDXRP22570 491 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 PSMA3P25788 255 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 MSNP26038 577 aaKnown RBP7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 PKLRP30613 574 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 CYLC1P35663 651 aaPredicted RBP7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 MARCKSL1P49006 195 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 CDKN1CP49918 316 aaPredicted RBP7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 RWDD2BP57060 319 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 AP2B1P63010 937 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 POU6F1Q14863 301 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 SLC9A5Q14940 896 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 TMED2Q15363 201 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 ZRSR2Q15696 482 aaKnown RBP7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 RBBP7Q16576 425 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 AARS2Q5JTZ9 985 aaKnown RBP7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 C1QL3Q5VWW1 255 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 RPUSD3Q6P087 351 aaKnown RBP7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 PRMT9Q6P2P2 845 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 ISLR2Q6UXK2 745 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 UNC5DQ6UXZ4 953 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 TTLL10Q6ZVT0 673 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 DCUN1D3Q8IWE4 304 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 FLVCR1-AS1Q8TAF5 88 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 GSDMBQ8TAX9 411 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 GRHL3Q8TE85 626 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 FAR1Q8WVX9 515 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 ASZ1Q8WWH4 475 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 KRT35Q92764 455 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 INPP5DQ92835 1189 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 ZUFSPQ96AP4 578 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 CNDP1Q96KN2 507 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 SLC6A20Q9NP91 592 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 CUTCQ9NTM9 273 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 SPHK1Q9NYA1 384 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 OSGIN2Q9Y236 505 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 PCDHA13Q9Y5I0 950 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 ABCA12Q86UK0 2595 aa7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 SPENQ96T58 3664 aaKnown RBP7.7□□□□□ -1.18
NIF3L1-209ENST00000454952 MYO7BQ6PIF6 2116 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 DYTNA2CJ06 578 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 TARM1B6A8C7 271 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 CCL22O00626 93 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 MAP2K7O14733 419 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 KPNA5O15131 536 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 PRPF4O43172 522 aaKnown RBP eCLIP7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 CNOT3O75175 753 aaKnown RBP7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 HPP00738 406 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 STSP08842 583 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 ACPPP15309 386 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 MAGP20916 626 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 CD9P21926 228 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 NAP1L1P55209 391 aaKnown RBP7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 OCA2Q04671 838 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 MFAP5Q13361 173 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 OLIG2Q13516 323 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 SPARCL1Q14515 664 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 BRD3Q15059 726 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 SF1Q15637 639 aaKnown RBP7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 NKG7Q16617 165 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 HIF1AQ16665 826 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 KCTD11Q693B1 232 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 MTFR2Q6P444 385 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 AFTPHQ6ULP2 937 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 KIRREL2Q6UWL6 708 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 NLRP9Q7RTR0 991 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 PIANPQ8IYJ0 282 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 SLC22A15Q8IZD6 547 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 OR2L8Q8NGY9 312 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 MAGEC3Q8TD91 643 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 PEX13Q92968 403 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 THOC3Q96J01 351 aaKnown RBP7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 SELENOSQ9BQE4 189 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 GOLPH3Q9H4A6 298 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 C10orf88Q9H8K7 445 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 OLAHQ9NV23 265 aa7.69□□□□□ -1.18
NIF3L1-209ENST00000454952 SUCOQ9UBS9 1254 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms