RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 ZNF382Q96SR6 550 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 RTKNQ9BST9 563 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 NKIRAS1Q9NYS0 192 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 SAMD15Q9P1V8 674 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 STX18Q9P2W9 335 aaKnown RBP4.8□□□□□ -1.64
RIF1-207ENST00000454583 TNFRSF10AO00220 468 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 LSM1O15116 133 aaKnown RBP4.8□□□□□ -1.64
RIF1-207ENST00000454583 PHGDHO43175 533 aaKnown RBP4.8□□□□□ -1.64
RIF1-207ENST00000454583 ATG13O75143 517 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 RSL1D1O76021 490 aaKnown RBP4.8□□□□□ -1.64
RIF1-207ENST00000454583 CD59P13987 128 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 CSF2RBP32927 897 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 RABIFP47224 123 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 AGTR2P50052 363 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 SRSF5Q13243 272 aaKnown RBP4.8□□□□□ -1.64
RIF1-207ENST00000454583 RPE65Q16518 533 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 OGFRL1Q5TC84 451 aaPredicted RBP4.8□□□□□ -1.64
RIF1-207ENST00000454583 VWA5B1Q5TIE3 1220 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 MRM1Q6IN84 353 aaKnown RBP4.8□□□□□ -1.64
RIF1-207ENST00000454583 LETMD1Q6P1Q0 360 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 GALNT18Q6P9A2 607 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 DSG4Q86SJ6 1040 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 TRIM74Q86UV6 250 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 PAQR7Q86WK9 346 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 TRIM42Q8IWZ5 723 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 OTUD6BQ8N6M0 293 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 OR2L8Q8NGY9 312 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 NT5CQ8TCD5 201 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 RSC1A1Q92681 617 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 AP2M1Q96CW1 435 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 ASPSCR1Q9BZE9 553 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 CD244Q9BZW8 370 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 ASB8Q9H765 288 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 TXLNGQ9NUQ3 528 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 GPRC5BQ9NZH0 403 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 NUDT4Q9NZJ9 180 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 MAP10Q9P2G4 905 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 TAGLN3Q9UI15 199 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 DNAJC15Q9Y5T4 150 aa4.8□□□□□ -1.64
RIF1-207ENST00000454583 DMXL2Q8TDJ6 3036 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 TCRBV3S1A0A5B6 114 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 OR2A25A4D2G3 310 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 NEMP2A6NFY4 417 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 YY2O15391 372 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 MTX2O75431 263 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 PIAS2O75928 621 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 RALBP11234 206 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 CPA3P15088 417 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 WASP42768 502 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 ACADVLP49748 655 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 CLCN2P51788 898 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 AQP5P55064 265 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 ZNF33BQ06732 778 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 ZFP36L1Q07352 338 aaKnown RBP4.79□□□□□ -1.64
RIF1-207ENST00000454583 TLR1Q15399 786 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 MAPK11Q15759 364 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 LSM12Q3MHD2 195 aaKnown RBP4.79□□□□□ -1.64
RIF1-207ENST00000454583 ARL13AQ5H913 290 aaPredicted RBP4.79□□□□□ -1.64
RIF1-207ENST00000454583 FOXB2Q5VYV0 432 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 ATG9BQ674R7 924 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 ADNP2Q6IQ32 1131 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 TSSK4Q6SA08 328 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 LCTLQ6UWM7 567 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 MBOAT1Q6ZNC8 495 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 CAPN12Q6ZSI9 719 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 CCDC121Q6ZUS5 278 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 ZNF551Q7Z340 670 aaPredicted RBP4.79□□□□□ -1.64
RIF1-207ENST00000454583 PTRH1Q86Y79 214 aaKnown RBP4.79□□□□□ -1.64
RIF1-207ENST00000454583 PSMA8Q8TAA3 256 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 SGF29Q96ES7 293 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 SIPA1Q96FS4 1042 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 TACO1Q9BSH4 297 aaKnown RBP4.79□□□□□ -1.64
RIF1-207ENST00000454583 KRTAP3-3Q9BYR6 98 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 KRTAP3-2Q9BYR7 98 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 IQCGQ9H095 443 aaKnown RBP4.79□□□□□ -1.64
RIF1-207ENST00000454583 FZD3Q9NPG1 666 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 UCKL1Q9NWZ5 548 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 ZSCAN32Q9NX65 697 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 ZFATQ9P243 1243 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 CES1P1Q9UKY3 287 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 TMCO1Q9UM00 188 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 C15orf41Q9Y2V0 281 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 GPR45Q9Y5Y3 372 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 PEX1O43933 1283 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 CAPN1P07384 714 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 CTSBP07858 339 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 MTHFD1P11586 935 aaKnown RBP4.79□□□□□ -1.64
RIF1-207ENST00000454583 ACP1P24666 158 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 MPSTP25325 297 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 FMO4P31512 558 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 WNT3P56703 355 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 SRP54P61011 504 aaKnown RBP4.79□□□□□ -1.64
RIF1-207ENST00000454583 REEP5Q00765 189 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 TSNAXIP1Q2TAA8 658 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 UAP1L1Q3KQV9 507 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 ATG16L1Q676U5 607 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 ERAP2Q6P179 960 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 GALNT13Q8IUC8 556 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 BBS5Q8N3I7 341 aa4.79□□□□□ -1.64
RIF1-207ENST00000454583 KIF2BQ8N4N8 673 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms