RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 SBSNQ6UWP8 590 aa27■■□□□ 1.91
SMARCC1-203ENST00000454240 CMC1Q7Z7K0 106 aa27■■□□□ 1.91
SMARCC1-203ENST00000454240 SMPDL3AQ92484 453 aa27■■□□□ 1.91
SMARCC1-203ENST00000454240 FGF11Q92914 225 aa27■■□□□ 1.91
SMARCC1-203ENST00000454240 DERL2Q9GZP9 239 aa27■■□□□ 1.91
SMARCC1-203ENST00000454240 APMAPQ9HDC9 416 aa27■■□□□ 1.91
SMARCC1-203ENST00000454240 ZNF180Q9UJW8 692 aa27■■□□□ 1.91
SMARCC1-203ENST00000454240 NOVA2Q9UNW9 492 aaKnown RBP27■■□□□ 1.91
SMARCC1-203ENST00000454240 E7ENX8 843 aa26.99■■□□□ 1.91
SMARCC1-203ENST00000454240 POC1B-GALNT4F8VUJ3 575 aa26.99■■□□□ 1.91
SMARCC1-203ENST00000454240 CDC7O00311 574 aa26.99■■□□□ 1.91
SMARCC1-203ENST00000454240 TLX3O43711 291 aaPredicted RBP26.99■■□□□ 1.91
SMARCC1-203ENST00000454240 PRAMEF10O60809 474 aa26.99■■□□□ 1.91
SMARCC1-203ENST00000454240 ENO2P09104 434 aaPredicted RBP26.99■■□□□ 1.91
SMARCC1-203ENST00000454240 CCDC166P0CW27 439 aa26.99■■□□□ 1.91
SMARCC1-203ENST00000454240 IMPA1P29218 277 aa26.99■■□□□ 1.91
SMARCC1-203ENST00000454240 CRABP2P29373 138 aa26.99■■□□□ 1.91
SMARCC1-203ENST00000454240 MSH2P43246 934 aa26.99■■□□□ 1.91
SMARCC1-203ENST00000454240 CSRP3P50461 194 aa26.99■■□□□ 1.91
SMARCC1-203ENST00000454240 TAP2Q03519 686 aa26.99■■□□□ 1.91
SMARCC1-203ENST00000454240 BMPR2Q13873 1038 aa26.99■■□□□ 1.91
SMARCC1-203ENST00000454240 ERCC6LQ2NKX8 1250 aa26.99■■□□□ 1.91
SMARCC1-203ENST00000454240 DCAF12Q5T6F0 453 aa26.99■■□□□ 1.91
SMARCC1-203ENST00000454240 LRRC56Q8IYG6 542 aaPredicted RBP26.99■■□□□ 1.91
SMARCC1-203ENST00000454240 OR2A1Q8NGT9 310 aa26.99■■□□□ 1.91
SMARCC1-203ENST00000454240 DCAKDQ8WVC6 231 aa26.99■■□□□ 1.91
SMARCC1-203ENST00000454240 OR6C1Q96RD1 312 aa26.99■■□□□ 1.91
SMARCC1-203ENST00000454240 ASPSCR1Q9BZE9 553 aa26.99■■□□□ 1.91
SMARCC1-203ENST00000454240 ACSL6Q9UKU0 697 aa26.99■■□□□ 1.91
SMARCC1-203ENST00000454240 B3GALT1Q9Y5Z6 326 aa26.99■■□□□ 1.91
SMARCC1-203ENST00000454240 IKBKGQ9Y6K9 419 aa26.99■■□□□ 1.91
SMARCC1-203ENST00000454240 TAF4O00268 1085 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 POLR1CO15160 346 aaPredicted RBP26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 FKBP9O95302 570 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 HIST1H2AGP0C0S8 130 aaPredicted RBP26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 EBLN1P0CF75 366 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 SLC35E2BP0CK96 405 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 HIST1H2ADP20671 130 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 SERPINB9P50453 376 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 AP1S2P56377 157 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 FOXM1Q08050 763 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 IL11RAQ14626 422 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 SF1Q15637 639 aaKnown RBP26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 PPP1R3AQ16821 1122 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 TMTC4Q5T4D3 741 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 PROSER1Q86XN7 944 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 FAM20CQ8IXL6 584 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 SNIP1Q8TAD8 396 aaKnown RBP26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 HIST1H2AHQ96KK5 128 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 HIST1H2AJQ99878 128 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 CTRCQ99895 268 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 H2AFJQ9BTM1 129 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 DHRS4Q9BTZ2 278 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 TRIM54Q9BYV2 358 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 CHRNA10Q9GZZ6 450 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 KLHL25Q9H0H3 589 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 PDE7BQ9NP56 450 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 SOHLH2Q9NX45 425 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 FOXJ2Q9P0K8 574 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 CAMSAP3Q9P1Y5 1249 aaPredicted RBP26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 STOX2Q9P2F5 926 aaPredicted RBP26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 ACACBO00763 2458 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 DMXL2Q8TDJ6 3036 aa26.98■■□□□ 1.91
SMARCC1-203ENST00000454240 SDK2Q58EX2 2172 aa26.97■■□□□ 1.91
SMARCC1-203ENST00000454240 TPRP12270 2363 aaKnown RBP26.97■■□□□ 1.91
SMARCC1-203ENST00000454240 EXOC1LA0A1B0GW35 172 aa26.97■■□□□ 1.91
SMARCC1-203ENST00000454240 MSL3P1P0C860 447 aa26.97■■□□□ 1.91
SMARCC1-203ENST00000454240 PSMB5P28074 263 aa26.97■■□□□ 1.91
SMARCC1-203ENST00000454240 GCAP28676 217 aa26.97■■□□□ 1.91
SMARCC1-203ENST00000454240 ACY1Q03154 408 aa26.97■■□□□ 1.91
SMARCC1-203ENST00000454240 ZIC1Q15915 447 aa26.97■■□□□ 1.91
SMARCC1-203ENST00000454240 SUSD1Q6UWL2 747 aa26.97■■□□□ 1.91
SMARCC1-203ENST00000454240 CEACAM20Q6UY09 585 aa26.97■■□□□ 1.91
SMARCC1-203ENST00000454240 MBOAT1Q6ZNC8 495 aa26.97■■□□□ 1.91
SMARCC1-203ENST00000454240 RAPH1Q70E73 1250 aa26.97■■□□□ 1.91
SMARCC1-203ENST00000454240 SYTL1Q8IYJ3 562 aa26.97■■□□□ 1.91
SMARCC1-203ENST00000454240 C19orf47Q8N9M1 422 aaKnown RBP26.97■■□□□ 1.91
SMARCC1-203ENST00000454240 PPFIBP2Q8ND30 876 aa26.97■■□□□ 1.91
SMARCC1-203ENST00000454240 TEFMQ96QE5 360 aaKnown RBP26.97■■□□□ 1.91
SMARCC1-203ENST00000454240 ZPBPQ9BS86 351 aa26.97■■□□□ 1.91
SMARCC1-203ENST00000454240 CTNNAL1Q9UBT7 734 aa26.97■■□□□ 1.91
SMARCC1-203ENST00000454240 PCDHB11Q9Y5F2 797 aa26.97■■□□□ 1.91
SMARCC1-203ENST00000454240 IGF2RP11717 2491 aa26.96■■□□□ 1.91
SMARCC1-203ENST00000454240 NPEPPSL1A6NEC2 478 aa26.96■■□□□ 1.91
SMARCC1-203ENST00000454240 FGF5P12034 268 aa26.96■■□□□ 1.91
SMARCC1-203ENST00000454240 CD1DP15813 335 aa26.96■■□□□ 1.91
SMARCC1-203ENST00000454240 SLC26A3P40879 764 aa26.96■■□□□ 1.91
SMARCC1-203ENST00000454240 TUBB3Q13509 450 aa26.96■■□□□ 1.91
SMARCC1-203ENST00000454240 KIAA1614Q5VZ46 1190 aa26.96■■□□□ 1.91
SMARCC1-203ENST00000454240 CYB5D1Q6P9G0 228 aa26.96■■□□□ 1.91
SMARCC1-203ENST00000454240 CCDC91Q7Z6B0 441 aa26.96■■□□□ 1.91
SMARCC1-203ENST00000454240 SPATA6LQ8N4H0 392 aa26.96■■□□□ 1.91
SMARCC1-203ENST00000454240 OR2L3Q8NG85 312 aa26.96■■□□□ 1.91
SMARCC1-203ENST00000454240 TCTN2Q96GX1 697 aa26.96■■□□□ 1.91
SMARCC1-203ENST00000454240 FGF21Q9NSA1 209 aa26.96■■□□□ 1.91
SMARCC1-203ENST00000454240 ARL15Q9NXU5 204 aa26.96■■□□□ 1.91
SMARCC1-203ENST00000454240 FETUBQ9UGM5 382 aa26.96■■□□□ 1.91
SMARCC1-203ENST00000454240 HEATR5BQ9P2D3 2071 aa26.96■■□□□ 1.91
SMARCC1-203ENST00000454240 APC2O95996 2303 aa26.95■■□□□ 1.91
SMARCC1-203ENST00000454240 MAP3K7O43318 606 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms