RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 PADI2Q9Y2J8 665 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 CRYL1Q9Y2S2 319 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 KLK4Q9Y5K2 254 aa11.99□□□□□ -0.49
CPSF4-208ENST00000452047 ZCWPW2A0A1B0GU75 182 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 A0A1W2PPV9 198 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 PFDN6O15212 129 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 FKBP9O95302 570 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 ERGP11308 486 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 PAMP19021 973 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 ITGAXP20702 1163 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 PSMB5P28074 263 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 CCNFP41002 786 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 PGDP52209 483 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 DCDP81605 110 aaKnown RBP11.98□□□□□ -0.49
CPSF4-208ENST00000452047 ATP1A4Q13733 1029 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 SF1Q15637 639 aaKnown RBP11.98□□□□□ -0.49
CPSF4-208ENST00000452047 IGFBP7Q16270 282 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 ZNF470Q6ECI4 717 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 NEPROQ6NW34 567 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 MRPL14Q6P1L8 145 aaKnown RBP11.98□□□□□ -0.49
CPSF4-208ENST00000452047 CASC4Q6P4E1 433 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 TTC23LQ6PF05 361 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 FIGLAQ6QHK4 219 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 MRGPREQ86SM8 312 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 MCATQ8IVS2 390 aaKnown RBP11.98□□□□□ -0.49
CPSF4-208ENST00000452047 SLC35F6Q8N357 371 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 TEX19Q8NA77 164 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 SKA2Q8WVK7 121 aaPredicted RBP11.98□□□□□ -0.49
CPSF4-208ENST00000452047 ZNF669Q96BR6 464 aaPredicted RBP11.98□□□□□ -0.49
CPSF4-208ENST00000452047 FAM136AQ96C01 138 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 ZNF285Q96NJ3 590 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 OSBPL9Q96SU4 736 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 NAP1L3Q99457 506 aaPredicted RBP11.98□□□□□ -0.49
CPSF4-208ENST00000452047 SLC22A11Q9NSA0 550 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 INTS7Q9NVH2 962 aaKnown RBP11.98□□□□□ -0.49
CPSF4-208ENST00000452047 INTS10Q9NVR2 710 aaKnown RBP11.98□□□□□ -0.49
CPSF4-208ENST00000452047 SAMD15Q9P1V8 674 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 MRFAP1Q9Y605 127 aa11.98□□□□□ -0.49
CPSF4-208ENST00000452047 USP9XQ93008 2570 aaPredicted RBP11.97□□□□□ -0.49
CPSF4-208ENST00000452047 SDR42E2A6NKP2 422 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 ARHGEF33A8MVX0 844 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 GOLGA8MH3BSY2 632 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 CTSVO60911 334 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 PHF2O75151 1096 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 F7P08709 466 aaPredicted RBP11.97□□□□□ -0.49
CPSF4-208ENST00000452047 PKMP14618 531 aaKnown RBP11.97□□□□□ -0.49
CPSF4-208ENST00000452047 GRIA3P42263 894 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 FNTAP49354 379 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 CCL11P51671 97 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 CLCN7P51798 805 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 FOXL2P58012 376 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 DHX34Q14147 1143 aaKnown RBP11.97□□□□□ -0.49
CPSF4-208ENST00000452047 SLC9A5Q14940 896 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 CYP2A13Q16696 494 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 NKAIN1Q4KMZ8 207 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 ACSBG2Q5FVE4 666 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.97□□□□□ -0.49
CPSF4-208ENST00000452047 MLIPQ5VWP3 458 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 MED25Q71SY5 747 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 RAB43Q86YS6 212 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 TMEM151BQ8IW70 566 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 DENND6AQ8IWF6 608 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 NAT8LQ8N9F0 302 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 TMEM102Q8N9M5 508 aaPredicted RBP11.97□□□□□ -0.49
CPSF4-208ENST00000452047 FDCSPQ8NFU4 85 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 OR2L3Q8NG85 312 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 OR2A1Q8NGT9 310 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 OR2Y1Q8NGV0 311 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 GIMAP7Q8NHV1 300 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 ACTRT1Q8TDG2 376 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 MIB2Q96AX9 1013 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 FOPNLQ96NB1 174 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 SLC30A3Q99726 388 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 NDC1Q9BTX1 674 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 KCNF1Q9H3M0 494 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 TXLNGQ9NUQ3 528 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 IRAK4Q9NWZ3 460 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 SPATA7Q9P0W8 599 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.97□□□□□ -0.49
CPSF4-208ENST00000452047 IFT80Q9P2H3 777 aaPredicted RBP11.97□□□□□ -0.49
CPSF4-208ENST00000452047 TSR3Q9UJK0 312 aaKnown RBP11.97□□□□□ -0.49
CPSF4-208ENST00000452047 VPS9D1Q9Y2B5 631 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 MED16Q9Y2X0 877 aa11.97□□□□□ -0.49
CPSF4-208ENST00000452047 HEATR5BQ9P2D3 2071 aa11.96□□□□□ -0.49
CPSF4-208ENST00000452047 A0A1B0GX78 115 aa11.96□□□□□ -0.49
CPSF4-208ENST00000452047 MAGEB16A2A368 324 aa11.96□□□□□ -0.49
CPSF4-208ENST00000452047 FITM1A5D6W6 292 aa11.96□□□□□ -0.49
CPSF4-208ENST00000452047 TARM1B6A8C7 271 aa11.96□□□□□ -0.49
CPSF4-208ENST00000452047 MYO1CO00159 1063 aa11.96□□□□□ -0.49
CPSF4-208ENST00000452047 CES2O00748 559 aa11.96□□□□□ -0.49
CPSF4-208ENST00000452047 KIF5CO60282 957 aa11.96□□□□□ -0.49
CPSF4-208ENST00000452047 NRP2O60462 931 aa11.96□□□□□ -0.49
CPSF4-208ENST00000452047 PSIP1O75475 530 aaKnown RBP11.96□□□□□ -0.49
CPSF4-208ENST00000452047 USP1O94782 785 aa11.96□□□□□ -0.49
CPSF4-208ENST00000452047 ONECUT2O95948 504 aa11.96□□□□□ -0.49
CPSF4-208ENST00000452047 UMODP07911 640 aa11.96□□□□□ -0.49
CPSF4-208ENST00000452047 CHRM3P20309 590 aa11.96□□□□□ -0.49
CPSF4-208ENST00000452047 MCM3P25205 808 aa11.96□□□□□ -0.49
CPSF4-208ENST00000452047 OTX2P32243 289 aa11.96□□□□□ -0.49
CPSF4-208ENST00000452047 CD97P48960 835 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms