RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 IGHEP01854 428 aa26.03■■□□□ 1.76
USP42-204ENST00000451154 MCM3P25205 808 aa26.03■■□□□ 1.76
USP42-204ENST00000451154 MRPL49Q13405 166 aaKnown RBP26.03■■□□□ 1.76
USP42-204ENST00000451154 MYBPC3Q14896 1274 aa26.03■■□□□ 1.76
USP42-204ENST00000451154 EIF2S3LQ2VIR3 472 aaKnown RBP26.03■■□□□ 1.76
USP42-204ENST00000451154 GSDMBQ8TAX9 411 aa26.03■■□□□ 1.76
USP42-204ENST00000451154 SKA2Q8WVK7 121 aaPredicted RBP26.03■■□□□ 1.76
USP42-204ENST00000451154 UBE2Q2Q8WVN8 375 aa26.03■■□□□ 1.76
USP42-204ENST00000451154 ZNF552Q9H707 407 aaPredicted RBP26.03■■□□□ 1.76
USP42-204ENST00000451154 INTS7Q9NVH2 962 aaKnown RBP26.03■■□□□ 1.76
USP42-204ENST00000451154 NFS1Q9Y697 457 aa26.03■■□□□ 1.76
USP42-204ENST00000451154 DOCK10Q96BY6 2186 aa26.03■■□□□ 1.76
USP42-204ENST00000451154 KRT87PA6NCN2 255 aa26.02■■□□□ 1.76
USP42-204ENST00000451154 PRICKLE3O43900 615 aaPredicted RBP26.02■■□□□ 1.76
USP42-204ENST00000451154 NPY2RP49146 381 aa26.02■■□□□ 1.76
USP42-204ENST00000451154 ARSFP54793 590 aa26.02■■□□□ 1.76
USP42-204ENST00000451154 BASP1P80723 227 aaKnown RBP26.02■■□□□ 1.76
USP42-204ENST00000451154 CYP2A13Q16696 494 aa26.02■■□□□ 1.76
USP42-204ENST00000451154 CCSMST1Q4G0I0 132 aa26.02■■□□□ 1.76
USP42-204ENST00000451154 HIST2H2BCQ6DN03 193 aa26.02■■□□□ 1.76
USP42-204ENST00000451154 TTC23LQ6PF05 361 aa26.02■■□□□ 1.76
USP42-204ENST00000451154 CES3Q6UWW8 571 aa26.02■■□□□ 1.76
USP42-204ENST00000451154 ZDHHC19Q8WVZ1 309 aaPredicted RBP26.02■■□□□ 1.76
USP42-204ENST00000451154 PANX3Q96QZ0 392 aa26.02■■□□□ 1.76
USP42-204ENST00000451154 EIF2B3Q9NR50 452 aaKnown RBP26.02■■□□□ 1.76
USP42-204ENST00000451154 BFARQ9NZS9 450 aa26.02■■□□□ 1.76
USP42-204ENST00000451154 GNPTGQ9UJJ9 305 aa26.02■■□□□ 1.76
USP42-204ENST00000451154 RUVBL2Q9Y230 463 aaKnown RBP26.02■■□□□ 1.76
USP42-204ENST00000451154 PCM1Q15154 2024 aa26.02■■□□□ 1.76
USP42-204ENST00000451154 BDKRB1P46663 353 aa26.01■■□□□ 1.75
USP42-204ENST00000451154 KCNJ1P48048 391 aa26.01■■□□□ 1.75
USP42-204ENST00000451154 ZC3H12BQ5HYM0 836 aaKnown RBP26.01■■□□□ 1.75
USP42-204ENST00000451154 DRICH1Q6PGQ1 229 aaPredicted RBP26.01■■□□□ 1.75
USP42-204ENST00000451154 GSTA5Q7RTV2 222 aa26.01■■□□□ 1.75
USP42-204ENST00000451154 OTOAQ7RTW8 1153 aa26.01■■□□□ 1.75
USP42-204ENST00000451154 OVCH1Q7RTY7 1134 aa26.01■■□□□ 1.75
USP42-204ENST00000451154 SNRNP40Q96DI7 357 aaKnown RBP26.01■■□□□ 1.75
USP42-204ENST00000451154 IL22Q9GZX6 179 aa26.01■■□□□ 1.75
USP42-204ENST00000451154 ZBTB20Q9HC78 741 aaPredicted RBP26.01■■□□□ 1.75
USP42-204ENST00000451154 ATP13A2Q9NQ11 1180 aa26.01■■□□□ 1.75
USP42-204ENST00000451154 CUTCQ9NTM9 273 aa26.01■■□□□ 1.75
USP42-204ENST00000451154 TEX15Q9BXT5 2789 aa26.01■■□□□ 1.75
USP42-204ENST00000451154 A0A1B0GX78 115 aa26■■□□□ 1.75
USP42-204ENST00000451154 C1orf105O95561 183 aa26■■□□□ 1.75
USP42-204ENST00000451154 ALPPP05187 535 aa26■■□□□ 1.75
USP42-204ENST00000451154 MGAT1P26572 445 aa26■■□□□ 1.75
USP42-204ENST00000451154 EIF3BP55884 814 aaKnown RBP26■■□□□ 1.75
USP42-204ENST00000451154 C4orf17Q53FE4 359 aa26■■□□□ 1.75
USP42-204ENST00000451154 CISD2Q8N5K1 135 aaKnown RBP26■■□□□ 1.75
USP42-204ENST00000451154 OTUD6BQ8N6M0 293 aa26■■□□□ 1.75
USP42-204ENST00000451154 ZUFSPQ96AP4 578 aa26■■□□□ 1.75
USP42-204ENST00000451154 RAD51AP1Q96B01 352 aa26■■□□□ 1.75
USP42-204ENST00000451154 SELENOSQ9BQE4 189 aa26■■□□□ 1.75
USP42-204ENST00000451154 B3GNT3Q9Y2A9 372 aa26■■□□□ 1.75
USP42-204ENST00000451154 GOLGA8KD6RF30 607 aa25.99■■□□□ 1.75
USP42-204ENST00000451154 GOLGA8TH3BQL2 631 aa25.99■■□□□ 1.75
USP42-204ENST00000451154 AGPSO00116 658 aa25.99■■□□□ 1.75
USP42-204ENST00000451154 DSCR3O14972 297 aa25.99■■□□□ 1.75
USP42-204ENST00000451154 CTSVO60911 334 aa25.99■■□□□ 1.75
USP42-204ENST00000451154 VAPBO95292 243 aa25.99■■□□□ 1.75
USP42-204ENST00000451154 PIM1P11309 404 aaPredicted RBP25.99■■□□□ 1.75
USP42-204ENST00000451154 RPS3P23396 243 aaKnown RBP eCLIP25.99■■□□□ 1.75
USP42-204ENST00000451154 VARSP26640 1264 aaKnown RBP25.99■■□□□ 1.75
USP42-204ENST00000451154 PSMB5P28074 263 aa25.99■■□□□ 1.75
USP42-204ENST00000451154 GRM7Q14831 915 aa25.99■■□□□ 1.75
USP42-204ENST00000451154 C4orf22Q6V702 233 aa25.99■■□□□ 1.75
USP42-204ENST00000451154 LRRC6Q86X45 466 aa25.99■■□□□ 1.75
USP42-204ENST00000451154 MPP5Q8N3R9 675 aa25.99■■□□□ 1.75
USP42-204ENST00000451154 PRR7Q8TB68 274 aa25.99■■□□□ 1.75
USP42-204ENST00000451154 DENND1AQ8TEH3 1009 aa25.99■■□□□ 1.75
USP42-204ENST00000451154 SSC4DQ8WTU2 575 aa25.99■■□□□ 1.75
USP42-204ENST00000451154 MFSD3Q96ES6 412 aa25.99■■□□□ 1.75
USP42-204ENST00000451154 MIPEPQ99797 713 aa25.99■■□□□ 1.75
USP42-204ENST00000451154 TSR3Q9UJK0 312 aaKnown RBP25.99■■□□□ 1.75
USP42-204ENST00000451154 CDC23Q9UJX2 597 aa25.99■■□□□ 1.75
USP42-204ENST00000451154 TARM1B6A8C7 271 aa25.98■■□□□ 1.75
USP42-204ENST00000451154 KPNA5O15131 536 aa25.98■■□□□ 1.75
USP42-204ENST00000451154 ALOX12BO75342 701 aa25.98■■□□□ 1.75
USP42-204ENST00000451154 ONECUT2O95948 504 aa25.98■■□□□ 1.75
USP42-204ENST00000451154 FGGP02679 453 aa25.98■■□□□ 1.75
USP42-204ENST00000451154 RNF224P0DH78 156 aa25.98■■□□□ 1.75
USP42-204ENST00000451154 MMP11P24347 488 aa25.98■■□□□ 1.75
USP42-204ENST00000451154 ARNTP27540 789 aa25.98■■□□□ 1.75
USP42-204ENST00000451154 FMO4P31512 558 aa25.98■■□□□ 1.75
USP42-204ENST00000451154 OR1D4P47884 311 aa25.98■■□□□ 1.75
USP42-204ENST00000451154 SOX8P57073 446 aa25.98■■□□□ 1.75
USP42-204ENST00000451154 VSX2P58304 361 aaPredicted RBP25.98■■□□□ 1.75
USP42-204ENST00000451154 NKG7Q16617 165 aa25.98■■□□□ 1.75
USP42-204ENST00000451154 TCTE1Q5JU00 501 aa25.98■■□□□ 1.75
USP42-204ENST00000451154 CTSL3PQ5NE16 218 aa25.98■■□□□ 1.75
USP42-204ENST00000451154 CNSTQ6PJW8 725 aa25.98■■□□□ 1.75
USP42-204ENST00000451154 IGFL3Q6UXB1 125 aa25.98■■□□□ 1.75
USP42-204ENST00000451154 SHISA6Q6ZSJ9 500 aa25.98■■□□□ 1.75
USP42-204ENST00000451154 COX15Q7KZN9 410 aa25.98■■□□□ 1.75
USP42-204ENST00000451154 IQCKQ8N0W5 287 aa25.98■■□□□ 1.75
USP42-204ENST00000451154 DTWD1Q8N5C7 304 aa25.98■■□□□ 1.75
USP42-204ENST00000451154 METTL27Q8N6F8 245 aaPredicted RBP25.98■■□□□ 1.75
USP42-204ENST00000451154 FKBP10Q96AY3 582 aa25.98■■□□□ 1.75
USP42-204ENST00000451154 ZNF285Q96NJ3 590 aa25.98■■□□□ 1.75
USP42-204ENST00000451154 BIRC8Q96P09 236 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms