RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 CYP8B1Q9UNU6 501 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 GPSM3Q9Y4H4 160 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 HS3ST3A1Q9Y663 406 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 KCNE2Q9Y6J6 123 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 E7EQ34 232 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 H0Y8X5 98 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 TOR1BO14657 336 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 AIM2O14862 343 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 CLGNO14967 610 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 IGHV4-34P06331 123 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 SNRPB2P08579 225 aaKnown RBP13.83□□□□□ -0.2
USP39-207ENST00000450066 ITGAXP20702 1163 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 CASP2P42575 452 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 GNPDA1P46926 289 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 PNLIPRP1P54315 467 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 TBPL1P62380 186 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 ARHGAP19Q14CB8 494 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 XKR6Q5GH73 641 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 FBXW10Q5XX13 1052 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 PAOXQ6QHF9 649 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 GCNT7Q6ZNI0 430 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 GK5Q6ZS86 529 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 TBC1D21Q8IYX1 336 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 KYQ8NBH2 561 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 TMEM145Q8NBT3 493 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 FAM13CQ8NE31 585 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 RCN3Q96D15 328 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 WDR92Q96MX6 357 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 TRIT1Q9H3H1 467 aaKnown RBP13.83□□□□□ -0.2
USP39-207ENST00000450066 OSGEPL1Q9H4B0 414 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 C6orf106Q9H6K1 298 aaPredicted RBP13.83□□□□□ -0.2
USP39-207ENST00000450066 EBF2Q9HAK2 575 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 TMEM45AQ9NWC5 275 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 KCNK6Q9Y257 313 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 CA5BQ9Y2D0 317 aa13.83□□□□□ -0.2
USP39-207ENST00000450066 SERTM1A2A2V5 107 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 TNFRSF10CO14798 259 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 ZNF217O75362 1048 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 PDYNP01213 254 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 NPPBP16860 134 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 IDSP22304 550 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 CCND1P24385 295 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 HSD17B2P37059 387 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 HNF4AP41235 474 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 NUDT2P50583 147 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 ZNF33BQ06732 778 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 DOC2AQ14183 400 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 E2F2Q14209 437 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 AP5B1Q2VPB7 878 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 SGO1Q5FBB7 561 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 FRG2Q64ET8 278 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 KIAA0895LQ68EN5 471 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 FUNDC1Q8IVP5 155 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 SIX5Q8N196 739 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 OR9I1Q8NGQ6 314 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 SELENOMQ8WWX9 145 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 FRG2BQ96QU4 278 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 OR2M4Q96R27 311 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 THTPAQ9BU02 230 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 MRPL1Q9BYD6 325 aaKnown RBP13.82□□□□□ -0.2
USP39-207ENST00000450066 FOXQ1Q9C009 403 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 CARS2Q9HA77 564 aaKnown RBP13.82□□□□□ -0.2
USP39-207ENST00000450066 NDE1Q9NXR1 346 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 WSB2Q9NYS7 404 aaPredicted RBP13.82□□□□□ -0.2
USP39-207ENST00000450066 WDR37Q9Y2I8 494 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 COL6A3P12111 3177 aa13.82□□□□□ -0.2
USP39-207ENST00000450066 PRAMEF26H0Y7S4 382 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 ERGP11308 486 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 CD22P20273 847 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 CD6P30203 668 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 RAP1GDS1P52306 607 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 RIPK1Q13546 671 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 IMPG1Q17R60 797 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 PDCD4Q53EL6 469 aaKnown RBP13.81□□□□□ -0.2
USP39-207ENST00000450066 GRHL2Q6ISB3 625 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 ENPP7Q6UWV6 458 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 C16orf89Q6UX73 402 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 RGL4Q8IZJ4 473 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 SETD7Q8WTS6 366 aaKnown RBP13.81□□□□□ -0.2
USP39-207ENST00000450066 OR1E3Q8WZA6 343 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 HHIPQ96QV1 700 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 C1orf50Q9BV19 199 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 CCDC177Q9NQR7 707 aaPredicted RBP13.81□□□□□ -0.2
USP39-207ENST00000450066 PRDM6Q9NQX0 595 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 NOP53Q9NZM5 478 aaKnown RBP13.81□□□□□ -0.2
USP39-207ENST00000450066 DMTF1Q9Y222 760 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 TDRKHQ9Y2W6 561 aaKnown RBP13.81□□□□□ -0.2
USP39-207ENST00000450066 PLEKHM1Q9Y4G2 1056 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 CFAP20Q9Y6A4 193 aaKnown RBP13.81□□□□□ -0.2
USP39-207ENST00000450066 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.81□□□□□ -0.2
USP39-207ENST00000450066 H0YIV9 168 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 PI15O43692 258 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 NUDT1P36639 197 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 NME5P56597 212 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 HMGCS1Q01581 520 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 MAD2L1Q13257 205 aaPredicted RBP13.81□□□□□ -0.2
USP39-207ENST00000450066 RFTN2Q52LD8 501 aaPredicted RBP13.81□□□□□ -0.2
USP39-207ENST00000450066 TPRG1LQ5T0D9 272 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 SLCO4C1Q6ZQN7 724 aa13.81□□□□□ -0.2
USP39-207ENST00000450066 ABI3BPQ7Z7G0 1075 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms