RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 RUNX1T1Q06455 604 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 DBPQ10586 325 aaPredicted RBP9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 GPR19Q15760 415 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 SNX20Q7Z614 316 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 KRT73Q86Y46 540 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 KIF18BQ86Y91 864 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 CILP2Q8IUL8 1156 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 GGHQ92820 318 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 TRMT61AQ96FX7 289 aaKnown RBP9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 GABARAPL1Q9H0R8 117 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 GLOD4Q9HC38 313 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 SPASTQ9UBP0 616 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 IKZF3Q9UKT9 509 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 RNF112Q9ULX5 631 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 CSADQ9Y600 493 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 BPTFQ12830 3046 aa9.2□□□□□ -0.94
SYNPO2-204ENST00000448416 CLCA1A8K7I4 914 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 BRCC3P46736 316 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 RHAGQ02094 409 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 MAPKAPK3Q16644 382 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 SLC35F1Q5T1Q4 408 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 NDUFAF5Q5TEU4 345 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 PM20D1Q6GTS8 502 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 TMC8Q8IU68 726 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 REPS1Q96D71 796 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 FCRL5Q96RD9 977 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 PCYT2Q99447 389 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 CNPPD1Q9BV87 410 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 FAM124BQ9H5Z6 455 aaPredicted RBP9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 TNFRSF10DQ9UBN6 386 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 ZNF490Q9ULM2 529 aaPredicted RBP9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 ABCG2Q9UNQ0 655 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 NCF1BA6NI72 391 aaPredicted RBP9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 NCF1CA8MVU1 366 aaPredicted RBP9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 NCF1P14598 390 aaPredicted RBP9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 ALAS2P22557 587 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 DNAJA1P31689 397 aaKnown RBP9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 AKT1P31749 480 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 ALDH6A1Q02252 535 aaKnown RBP9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 MAB21L1Q13394 359 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 MED22Q15528 200 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 TSTQ16762 297 aaKnown RBP9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 GPR153Q6NV75 609 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 ZNF549Q6P9A3 640 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 PHC2Q8IXK0 858 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 OR52E4Q8NGH9 312 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 SLC13A3Q8WWT9 602 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 FAM120BQ96EK7 910 aaKnown RBP9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 KIF12Q96FN5 646 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 HBEGFQ99075 208 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 ASPNQ9BXN1 380 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 MINDY3Q9H8M7 445 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 ZNF304Q9HCX3 659 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 GPR83Q9NYM4 423 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 USP21Q9UK80 565 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 SAMHD1Q9Y3Z3 626 aaKnown RBP9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 SNX10Q9Y5X0 201 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 ALG5Q9Y673 324 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 COL11A2P13942 1736 aaPredicted RBP9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 UBA6A0AVT1 1052 aaPredicted RBP9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 IFRD1O00458 451 aaPredicted RBP9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 FPR1P21462 350 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 NRIP1P48552 1158 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 FAM160B1Q5W0V3 765 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 RNF130Q86XS8 419 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 RASAL3Q86YV0 1011 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 PGBD5Q8N414 524 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 NLGN4YQ8NFZ3 816 aaPredicted RBP9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 TRPM4Q8TD43 1214 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 FAM151AQ8WW52 585 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 ATOH8Q96SQ7 321 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 ZBTB18Q99592 522 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 NDFIP2Q9NV92 336 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 TMEM45AQ9NWC5 275 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 TRIM3O75382 744 aaPredicted RBP9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 WISP3O95389 354 aaPredicted RBP9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 F9P00740 461 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 IFNA16P05015 189 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 ETV1P50549 477 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 RGS1Q08116 209 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 NR6A1Q15406 480 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 ANKS3Q6ZW76 656 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 CCDC117Q8IWD4 279 aaPredicted RBP9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 DNAJC22Q8N4W6 341 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 TESCQ96BS2 214 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 DCLRE1CQ96SD1 692 aaKnown RBP9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 PPIL3Q9H2H8 161 aaKnown RBP9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 GALPQ9UBC7 116 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 NEUROG3Q9Y4Z2 214 aa9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 POLR3HQ9Y535 204 aaPredicted RBP9.19□□□□□ -0.94
SYNPO2-204ENST00000448416 LTBP1Q14766 1721 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 TOR1AO14656 332 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 OR4F21O95013 312 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 S1PR4O95977 384 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 LIMK1P53667 647 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 CAMK2GQ13555 558 aaPredicted RBP9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 C10orf62Q5T681 223 aaPredicted RBP9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 TYW3Q6IPR3 259 aaKnown RBP9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 KLHL17Q6TDP4 642 aa9.18□□□□□ -0.94
SYNPO2-204ENST00000448416 Q6ZPB1 254 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms