RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 ALPPP05187 535 aa27.14■■□□□ 1.94
CBX4-202ENST00000448310 BDKRB1P46663 353 aa27.14■■□□□ 1.94
CBX4-202ENST00000448310 SF1Q15637 639 aaKnown RBP27.14■■□□□ 1.94
CBX4-202ENST00000448310 PCID2Q5JVF3 399 aa27.14■■□□□ 1.94
CBX4-202ENST00000448310 FIGLAQ6QHK4 219 aa27.14■■□□□ 1.94
CBX4-202ENST00000448310 CISD2Q8N5K1 135 aaKnown RBP27.14■■□□□ 1.94
CBX4-202ENST00000448310 PRR7Q8TB68 274 aa27.14■■□□□ 1.94
CBX4-202ENST00000448310 ZDHHC19Q8WVZ1 309 aaPredicted RBP27.14■■□□□ 1.94
CBX4-202ENST00000448310 SLC22A18Q96BI1 424 aa27.14■■□□□ 1.94
CBX4-202ENST00000448310 ZBTB20Q9HC78 741 aaPredicted RBP27.14■■□□□ 1.94
CBX4-202ENST00000448310 B3GNT3Q9Y2A9 372 aa27.14■■□□□ 1.94
CBX4-202ENST00000448310 NFS1Q9Y697 457 aa27.14■■□□□ 1.94
CBX4-202ENST00000448310 A0A1B0GX78 115 aa27.13■■□□□ 1.93
CBX4-202ENST00000448310 TTPAP49638 278 aa27.13■■□□□ 1.93
CBX4-202ENST00000448310 KCTD19Q17RG1 926 aaPredicted RBP27.13■■□□□ 1.93
CBX4-202ENST00000448310 CCSMST1Q4G0I0 132 aa27.13■■□□□ 1.93
CBX4-202ENST00000448310 IQCKQ8N0W5 287 aa27.13■■□□□ 1.93
CBX4-202ENST00000448310 METTL27Q8N6F8 245 aaPredicted RBP27.13■■□□□ 1.93
CBX4-202ENST00000448310 P2RY12Q9H244 342 aa27.13■■□□□ 1.93
CBX4-202ENST00000448310 INTS7Q9NVH2 962 aaKnown RBP27.13■■□□□ 1.93
CBX4-202ENST00000448310 ASF1BQ9NVP2 202 aa27.13■■□□□ 1.93
CBX4-202ENST00000448310 AGPSO00116 658 aa27.12■■□□□ 1.93
CBX4-202ENST00000448310 PSMB5P28074 263 aa27.12■■□□□ 1.93
CBX4-202ENST00000448310 NMBRP28336 390 aa27.12■■□□□ 1.93
CBX4-202ENST00000448310 ARSFP54793 590 aa27.12■■□□□ 1.93
CBX4-202ENST00000448310 NR6A1Q15406 480 aa27.12■■□□□ 1.93
CBX4-202ENST00000448310 SIX1Q15475 284 aaPredicted RBP27.12■■□□□ 1.93
CBX4-202ENST00000448310 COX15Q7KZN9 410 aa27.12■■□□□ 1.93
CBX4-202ENST00000448310 DTWD1Q8N5C7 304 aa27.12■■□□□ 1.93
CBX4-202ENST00000448310 SKA2Q8WVK7 121 aaPredicted RBP27.12■■□□□ 1.93
CBX4-202ENST00000448310 INPP5DQ92835 1189 aa27.12■■□□□ 1.93
CBX4-202ENST00000448310 ATP13A2Q9NQ11 1180 aa27.12■■□□□ 1.93
CBX4-202ENST00000448310 TREX1Q9NSU2 369 aa27.12■■□□□ 1.93
CBX4-202ENST00000448310 CUTCQ9NTM9 273 aa27.12■■□□□ 1.93
CBX4-202ENST00000448310 GNPTGQ9UJJ9 305 aa27.12■■□□□ 1.93
CBX4-202ENST00000448310 TTC7AQ9ULT0 858 aaPredicted RBP27.12■■□□□ 1.93
CBX4-202ENST00000448310 TEX15Q9BXT5 2789 aa27.12■■□□□ 1.93
CBX4-202ENST00000448310 DSCR3O14972 297 aa27.11■■□□□ 1.93
CBX4-202ENST00000448310 VARSP26640 1264 aaKnown RBP27.11■■□□□ 1.93
CBX4-202ENST00000448310 ZC3H12BQ5HYM0 836 aaKnown RBP27.11■■□□□ 1.93
CBX4-202ENST00000448310 IGFL3Q6UXB1 125 aa27.11■■□□□ 1.93
CBX4-202ENST00000448310 SHISA6Q6ZSJ9 500 aa27.11■■□□□ 1.93
CBX4-202ENST00000448310 OVCH1Q7RTY7 1134 aa27.11■■□□□ 1.93
CBX4-202ENST00000448310 GSDMBQ8TAX9 411 aa27.11■■□□□ 1.93
CBX4-202ENST00000448310 FKBP10Q96AY3 582 aa27.11■■□□□ 1.93
CBX4-202ENST00000448310 PANX3Q96QZ0 392 aa27.11■■□□□ 1.93
CBX4-202ENST00000448310 SELENOSQ9BQE4 189 aa27.11■■□□□ 1.93
CBX4-202ENST00000448310 ILKAPQ9H0C8 392 aaPredicted RBP27.11■■□□□ 1.93
CBX4-202ENST00000448310 SLC6A20Q9NP91 592 aa27.11■■□□□ 1.93
CBX4-202ENST00000448310 TSR3Q9UJK0 312 aaKnown RBP27.11■■□□□ 1.93
CBX4-202ENST00000448310 CDC23Q9UJX2 597 aa27.11■■□□□ 1.93
CBX4-202ENST00000448310 FBXL4Q9UKA2 621 aa27.11■■□□□ 1.93
CBX4-202ENST00000448310 CNTRLQ7Z7A1 2325 aa27.11■■□□□ 1.93
CBX4-202ENST00000448310 A1L4Q6 167 aa27.1■■□□□ 1.93
CBX4-202ENST00000448310 PRICKLE3O43900 615 aaPredicted RBP27.1■■□□□ 1.93
CBX4-202ENST00000448310 NDUFS3O75489 264 aa27.1■■□□□ 1.93
CBX4-202ENST00000448310 C1orf105O95561 183 aa27.1■■□□□ 1.93
CBX4-202ENST00000448310 ITGA3P26006 1051 aa27.1■■□□□ 1.93
CBX4-202ENST00000448310 CDC25BP30305 580 aa27.1■■□□□ 1.93
CBX4-202ENST00000448310 EIF3BP55884 814 aaKnown RBP27.1■■□□□ 1.93
CBX4-202ENST00000448310 BASP1P80723 227 aaKnown RBP27.1■■□□□ 1.93
CBX4-202ENST00000448310 RPS6KA1Q15418 735 aa27.1■■□□□ 1.93
CBX4-202ENST00000448310 NKG7Q16617 165 aa27.1■■□□□ 1.93
CBX4-202ENST00000448310 MEI1Q5TIA1 1274 aa27.1■■□□□ 1.93
CBX4-202ENST00000448310 OTUD6BQ8N6M0 293 aa27.1■■□□□ 1.93
CBX4-202ENST00000448310 RAD51AP1Q96B01 352 aa27.1■■□□□ 1.93
CBX4-202ENST00000448310 SPSB2Q99619 263 aa27.1■■□□□ 1.93
CBX4-202ENST00000448310 TSGA10Q9BZW7 698 aa27.1■■□□□ 1.93
CBX4-202ENST00000448310 SOX17Q9H6I2 414 aaPredicted RBP27.1■■□□□ 1.93
CBX4-202ENST00000448310 EIF2B3Q9NR50 452 aaKnown RBP27.1■■□□□ 1.93
CBX4-202ENST00000448310 CTSFQ9UBX1 484 aa27.1■■□□□ 1.93
CBX4-202ENST00000448310 UNC79Q9P2D8 2635 aa27.1■■□□□ 1.93
CBX4-202ENST00000448310 NRP2O60462 931 aa27.09■■□□□ 1.93
CBX4-202ENST00000448310 CTSVO60911 334 aa27.09■■□□□ 1.93
CBX4-202ENST00000448310 MMP11P24347 488 aa27.09■■□□□ 1.93
CBX4-202ENST00000448310 OR1D4P47884 311 aa27.09■■□□□ 1.93
CBX4-202ENST00000448310 SOX8P57073 446 aa27.09■■□□□ 1.93
CBX4-202ENST00000448310 GRM7Q14831 915 aa27.09■■□□□ 1.93
CBX4-202ENST00000448310 CCNG2Q16589 344 aa27.09■■□□□ 1.93
CBX4-202ENST00000448310 TTC23LQ6PF05 361 aa27.09■■□□□ 1.93
CBX4-202ENST00000448310 CNSTQ6PJW8 725 aa27.09■■□□□ 1.93
CBX4-202ENST00000448310 CES3Q6UWW8 571 aa27.09■■□□□ 1.93
CBX4-202ENST00000448310 OTOAQ7RTW8 1153 aa27.09■■□□□ 1.93
CBX4-202ENST00000448310 ZADH2Q8N4Q0 377 aa27.09■■□□□ 1.93
CBX4-202ENST00000448310 MIPEPQ99797 713 aa27.09■■□□□ 1.93
CBX4-202ENST00000448310 RAB11FIP5Q9BXF6 653 aa27.09■■□□□ 1.93
CBX4-202ENST00000448310 CUEDC1Q9NWM3 386 aaPredicted RBP27.09■■□□□ 1.93
CBX4-202ENST00000448310 SOCS6O14544 535 aa27.08■■□□□ 1.93
CBX4-202ENST00000448310 IPO13O94829 963 aaKnown RBP27.08■■□□□ 1.93
CBX4-202ENST00000448310 ONECUT2O95948 504 aa27.08■■□□□ 1.93
CBX4-202ENST00000448310 RPS3P23396 243 aaKnown RBP eCLIP27.08■■□□□ 1.937e-7■□□□□ 11
CBX4-202ENST00000448310 VSX2P58304 361 aaPredicted RBP27.08■■□□□ 1.93
CBX4-202ENST00000448310 AIMP2Q13155 320 aaKnown RBP27.08■■□□□ 1.93
CBX4-202ENST00000448310 TCTE1Q5JU00 501 aa27.08■■□□□ 1.93
CBX4-202ENST00000448310 CTSL3PQ5NE16 218 aa27.08■■□□□ 1.93
CBX4-202ENST00000448310 TTC29Q8NA56 475 aaPredicted RBP27.08■■□□□ 1.93
CBX4-202ENST00000448310 DENND1AQ8TEH3 1009 aa27.08■■□□□ 1.93
CBX4-202ENST00000448310 TM9SF4Q92544 642 aa27.08■■□□□ 1.93
CBX4-202ENST00000448310 ZNF285Q96NJ3 590 aa27.08■■□□□ 1.93
CBX4-202ENST00000448310 IL22Q9GZX6 179 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms