RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 BRINP1O60477 761 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 CD3GP09693 182 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 NECTIN1Q15223 517 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 CPSF6Q16630 551 aaKnown RBP eCLIP8.78□□□□□ -1
NIPBL-202ENST00000448238 BTBD16Q32M84 506 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 ZCCHC23Q6ZST2 131 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 ZNF611Q8N823 705 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 GSTCDQ8NEC7 633 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 SLC6A17Q9H1V8 727 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 DPEP2Q9H4A9 486 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 LY9Q9HBG7 655 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 BLOC1S4Q9NUP1 217 aa8.78□□□□□ -1
NIPBL-202ENST00000448238 KDM5BQ9UGL1 1544 aa8.77□□□□□ -1
NIPBL-202ENST00000448238 LRATO95237 230 aa8.77□□□□□ -1
NIPBL-202ENST00000448238 MAOAP21397 527 aa8.77□□□□□ -1
NIPBL-202ENST00000448238 LPOP22079 712 aaPredicted RBP8.77□□□□□ -1
NIPBL-202ENST00000448238 IL32P24001 234 aa8.77□□□□□ -1
NIPBL-202ENST00000448238 ETV5P41161 510 aa8.77□□□□□ -1
NIPBL-202ENST00000448238 NR4A2P43354 598 aa8.77□□□□□ -1
NIPBL-202ENST00000448238 KHKP50053 298 aa8.77□□□□□ -1
NIPBL-202ENST00000448238 NOMO3P69849 1222 aa8.77□□□□□ -1
NIPBL-202ENST00000448238 CHIT1Q13231 466 aa8.77□□□□□ -1
NIPBL-202ENST00000448238 PEA15Q15121 130 aa8.77□□□□□ -1
NIPBL-202ENST00000448238 NOMO1Q15155 1222 aa8.77□□□□□ -1
NIPBL-202ENST00000448238 QPCTQ16769 361 aa8.77□□□□□ -1
NIPBL-202ENST00000448238 TPRG1LQ5T0D9 272 aa8.77□□□□□ -1
NIPBL-202ENST00000448238 LDHDQ86WU2 507 aa8.77□□□□□ -1
NIPBL-202ENST00000448238 PHOX2BQ99453 314 aa8.77□□□□□ -1
NIPBL-202ENST00000448238 DNAJC5Q9H3Z4 198 aa8.77□□□□□ -1
NIPBL-202ENST00000448238 MAGI1Q96QZ7 1491 aaPredicted RBP8.77□□□□□ -1.01
NIPBL-202ENST00000448238 FAM86B1E9PN63 330 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 SEC14L2O76054 403 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 FAM86B2P0C5J1 330 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 PON1P27169 355 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 HCAR3P49019 387 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 CXCR3P49682 368 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 SNAPC2Q13487 334 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 CAPSQ13938 189 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 ANKDD1AQ495B1 522 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 NDUFAF5Q5TEU4 345 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 PXKQ7Z7A4 578 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 LILRB2Q8N423 598 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 FAM86B1Q8N7N1 296 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 SLC22A8Q8TCC7 542 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 MAELQ96JY0 434 aaKnown RBP8.77□□□□□ -1.01
NIPBL-202ENST00000448238 FERD3LQ96RJ6 166 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 OR51E2Q9H255 320 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 PAK1IP1Q9NWT1 392 aaPredicted RBP8.77□□□□□ -1.01
NIPBL-202ENST00000448238 NINJ2Q9NZG7 142 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 PCDHGA7Q9Y5G6 932 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 LRP5LA4QPB2 252 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 NT5C1B-RDH14C9J2C7 533 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 RBBP9O75884 186 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 RCBTB2O95199 551 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 CYP11A1P05108 521 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 SLC35G6P0C7Q6 338 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 AKR1C4P17516 323 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 TAS2R30P59541 319 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 ARL16Q0P5N6 197 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 NOMO2Q5JPE7 1267 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 ZNF484Q5JVG2 852 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 SLC39A4Q6P5W5 647 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 LSMEM2Q8N112 164 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 GCDHQ92947 438 aaPredicted RBP8.77□□□□□ -1.01
NIPBL-202ENST00000448238 FCRL2Q96LA5 508 aaPredicted RBP8.77□□□□□ -1.01
NIPBL-202ENST00000448238 IL26Q9NPH9 171 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 C11orf16Q9NQ32 467 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 XPNPEP3Q9NQH7 507 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 PRDM9Q9NQV7 894 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 SNAP29O95721 258 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 ADRA1DP25100 572 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 CD6P30203 668 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 FAM98CQ17RN3 349 aaKnown RBP8.77□□□□□ -1.01
NIPBL-202ENST00000448238 PIGGQ5H8A4 983 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 FAM111BQ6SJ93 734 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 TNFRSF25Q93038 417 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 JUNP05412 331 aaKnown RBP8.77□□□□□ -1.01
NIPBL-202ENST00000448238 STAG3L2P0CL84 134 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 CCNJQ5T5M9 372 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 TFAP2DQ7Z6R9 452 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 YIPF7Q8N8F6 280 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 OR1E3Q8WZA6 343 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 URM1Q9BTM9 101 aaKnown RBP8.77□□□□□ -1.01
NIPBL-202ENST00000448238 RTFDC1Q9BY42 306 aaPredicted RBP8.77□□□□□ -1.01
NIPBL-202ENST00000448238 MEAF6Q9HAF1 191 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 RPS10P5Q9NQ39 176 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 ST14Q9Y5Y6 855 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 A0A0A0MRY4 1105 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 MAGEB4O15481 346 aaPredicted RBP8.77□□□□□ -1.01
NIPBL-202ENST00000448238 METTL15P1P0C7V9 234 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 MATN1P21941 496 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 DNASE1P24855 282 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 CHATP28329 748 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 FXR2P51116 673 aaKnown RBP eCLIP8.77□□□□□ -1.016e-7■■■■□ 21.6
NIPBL-202ENST00000448238 COTL1Q14019 142 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 RABL3Q5HYI8 236 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 NR4A3Q92570 626 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 SPATA13Q96N96 652 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 GAL3ST1Q99999 423 aa8.77□□□□□ -1.01
NIPBL-202ENST00000448238 WACQ9BTA9 647 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms