RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 FAM159BA6NKW6 160 aa23.12■■□□□ 1.29
C9orf3-207ENST00000445181 RHOXF2BP0C7M4 288 aa23.12■■□□□ 1.29
C9orf3-207ENST00000445181 PEBP1P30086 187 aaKnown RBP23.12■■□□□ 1.29
C9orf3-207ENST00000445181 IL2P60568 153 aa23.12■■□□□ 1.29
C9orf3-207ENST00000445181 C19orf57Q0VDD7 668 aa23.12■■□□□ 1.29
C9orf3-207ENST00000445181 ILF2Q12905 390 aaKnown RBP23.12■■□□□ 1.29
C9orf3-207ENST00000445181 SLC5A12Q1EHB4 618 aa23.12■■□□□ 1.29
C9orf3-207ENST00000445181 CYHR1Q6ZMK1 362 aa23.12■■□□□ 1.29
C9orf3-207ENST00000445181 IFT20Q8IY31 132 aa23.12■■□□□ 1.29
C9orf3-207ENST00000445181 WBP1Q96G27 269 aa23.12■■□□□ 1.29
C9orf3-207ENST00000445181 TRAPPC9Q96Q05 1148 aa23.12■■□□□ 1.29
C9orf3-207ENST00000445181 CPNE1Q99829 537 aa23.12■■□□□ 1.29
C9orf3-207ENST00000445181 RHOXF2Q9BQY4 288 aa23.12■■□□□ 1.29
C9orf3-207ENST00000445181 FANCEQ9HB96 536 aa23.12■■□□□ 1.29
C9orf3-207ENST00000445181 FGF21Q9NSA1 209 aa23.12■■□□□ 1.29
C9orf3-207ENST00000445181 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.12■■□□□ 1.29
C9orf3-207ENST00000445181 MYO1CO00159 1063 aa23.11■■□□□ 1.29
C9orf3-207ENST00000445181 C1QL1O75973 258 aa23.11■■□□□ 1.29
C9orf3-207ENST00000445181 PGGT1BP53609 377 aa23.11■■□□□ 1.29
C9orf3-207ENST00000445181 SLC12A2P55011 1212 aa23.11■■□□□ 1.29
C9orf3-207ENST00000445181 TUBB4BP68371 445 aa23.11■■□□□ 1.29
C9orf3-207ENST00000445181 SF1Q15637 639 aaKnown RBP23.11■■□□□ 1.29
C9orf3-207ENST00000445181 GPR19Q15760 415 aa23.11■■□□□ 1.29
C9orf3-207ENST00000445181 KBTBD12Q3ZCT8 623 aa23.11■■□□□ 1.29
C9orf3-207ENST00000445181 PPM1NQ8N819 430 aa23.11■■□□□ 1.29
C9orf3-207ENST00000445181 C19orf47Q8N9M1 422 aaKnown RBP23.11■■□□□ 1.29
C9orf3-207ENST00000445181 DENND1AQ8TEH3 1009 aa23.11■■□□□ 1.29
C9orf3-207ENST00000445181 VPS39Q96JC1 886 aa23.11■■□□□ 1.29
C9orf3-207ENST00000445181 PKP4Q99569 1192 aa23.11■■□□□ 1.29
C9orf3-207ENST00000445181 ULBP3Q9BZM4 244 aa23.11■■□□□ 1.29
C9orf3-207ENST00000445181 PABPN1LA6NDY0 278 aaKnown RBP23.1■■□□□ 1.29
C9orf3-207ENST00000445181 GFYI3L273 518 aa23.1■■□□□ 1.29
C9orf3-207ENST00000445181 FGF5P12034 268 aa23.1■■□□□ 1.29
C9orf3-207ENST00000445181 CYP2A7P20853 494 aa23.1■■□□□ 1.29
C9orf3-207ENST00000445181 PHBP35232 272 aa23.1■■□□□ 1.29
C9orf3-207ENST00000445181 GP5P40197 560 aa23.1■■□□□ 1.29
C9orf3-207ENST00000445181 TSTA3Q13630 321 aaPredicted RBP23.1■■□□□ 1.29
C9orf3-207ENST00000445181 BPHLQ86WA6 291 aaPredicted RBP23.1■■□□□ 1.29
C9orf3-207ENST00000445181 FLVCR1-AS1Q8TAF5 88 aa23.1■■□□□ 1.29
C9orf3-207ENST00000445181 N4BP2L2Q92802 583 aaPredicted RBP23.1■■□□□ 1.29
C9orf3-207ENST00000445181 RNF31Q96EP0 1072 aa23.1■■□□□ 1.29
C9orf3-207ENST00000445181 SDK2Q58EX2 2172 aa23.09■■□□□ 1.29
C9orf3-207ENST00000445181 ZNF839A8K0R7 811 aa23.09■■□□□ 1.29
C9orf3-207ENST00000445181 STK17BO94768 372 aa23.09■■□□□ 1.29
C9orf3-207ENST00000445181 C8GP07360 202 aa23.09■■□□□ 1.29
C9orf3-207ENST00000445181 HSD17B2P37059 387 aa23.09■■□□□ 1.29
C9orf3-207ENST00000445181 ATP1A2P50993 1020 aa23.09■■□□□ 1.29
C9orf3-207ENST00000445181 CYP2A13Q16696 494 aa23.09■■□□□ 1.29
C9orf3-207ENST00000445181 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.09■■□□□ 1.29
C9orf3-207ENST00000445181 FAM20CQ8IXL6 584 aa23.09■■□□□ 1.29
C9orf3-207ENST00000445181 FBXO15Q8NCQ5 510 aaPredicted RBP23.09■■□□□ 1.29
C9orf3-207ENST00000445181 HMGCLL1Q8TB92 370 aa23.09■■□□□ 1.29
C9orf3-207ENST00000445181 MCOLN3Q8TDD5 553 aa23.09■■□□□ 1.29
C9orf3-207ENST00000445181 NKD1Q969G9 470 aa23.09■■□□□ 1.29
C9orf3-207ENST00000445181 TCTN2Q96GX1 697 aa23.09■■□□□ 1.29
C9orf3-207ENST00000445181 L2HGDHQ9H9P8 463 aa23.09■■□□□ 1.29
C9orf3-207ENST00000445181 NINJ2Q9NZG7 142 aa23.09■■□□□ 1.29
C9orf3-207ENST00000445181 OAS2P29728 719 aaKnown RBP23.08■■□□□ 1.29
C9orf3-207ENST00000445181 PNLIPRP1P54315 467 aa23.08■■□□□ 1.29
C9orf3-207ENST00000445181 TAS2R39P59534 338 aa23.08■■□□□ 1.29
C9orf3-207ENST00000445181 SP140Q13342 867 aa23.08■■□□□ 1.29
C9orf3-207ENST00000445181 NAB1Q13506 487 aa23.08■■□□□ 1.29
C9orf3-207ENST00000445181 FASTKQ14296 549 aaKnown RBP23.08■■□□□ 1.29
C9orf3-207ENST00000445181 ARHGAP19Q14CB8 494 aa23.08■■□□□ 1.29
C9orf3-207ENST00000445181 GRTP1Q5TC63 336 aa23.08■■□□□ 1.29
C9orf3-207ENST00000445181 IL22RA1Q8N6P7 574 aa23.08■■□□□ 1.29
C9orf3-207ENST00000445181 ZSCAN1Q8NBB4 408 aa23.08■■□□□ 1.29
C9orf3-207ENST00000445181 LRRN4CLQ8ND94 238 aa23.08■■□□□ 1.29
C9orf3-207ENST00000445181 RBBP8Q99708 897 aa23.08■■□□□ 1.29
C9orf3-207ENST00000445181 TWSG1Q9GZX9 223 aa23.08■■□□□ 1.29
C9orf3-207ENST00000445181 SYTL2Q9HCH5 934 aa23.08■■□□□ 1.29
C9orf3-207ENST00000445181 INTS7Q9NVH2 962 aaKnown RBP23.08■■□□□ 1.29
C9orf3-207ENST00000445181 ADAMTS6Q9UKP5 1117 aa23.08■■□□□ 1.29
C9orf3-207ENST00000445181 NFU1Q9UMS0 254 aa23.08■■□□□ 1.29
C9orf3-207ENST00000445181 MTO1Q9Y2Z2 717 aaKnown RBP23.08■■□□□ 1.29
C9orf3-207ENST00000445181 TMEM150CB9EJG8 249 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 SLC16A5O15375 505 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 RAD1O60671 282 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 KIAA0754O94854 1291 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 SLC16A8O95907 504 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 C1QAP02745 245 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 MAGP20916 626 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 ECHS1P30084 290 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 RPA3P35244 121 aaPredicted RBP23.07■■□□□ 1.28
C9orf3-207ENST00000445181 SPRP35270 261 aaPredicted RBP23.07■■□□□ 1.28
C9orf3-207ENST00000445181 POU4F1Q01851 419 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 LY6DQ14210 128 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 ZNF460Q14592 562 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 USP10Q14694 798 aaKnown RBP23.07■■□□□ 1.28
C9orf3-207ENST00000445181 EFTUD2Q15029 972 aaKnown RBP eCLIP23.07■■□□□ 1.288e-8■■■□□ 19.1
C9orf3-207ENST00000445181 CDHR3Q6ZTQ4 885 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 RELL1Q8IUW5 271 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 SYTL1Q8IYJ3 562 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 CACNA2D3Q8IZS8 1091 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 NLGN4XQ8N0W4 816 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 ZNF843Q8N446 348 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 NKAPQ8N5F7 415 aaKnown RBP23.07■■□□□ 1.28
C9orf3-207ENST00000445181 NLGN4YQ8NFZ3 816 aaPredicted RBP23.07■■□□□ 1.28
C9orf3-207ENST00000445181 OR8K5Q8NH50 307 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 SMPDL3AQ92484 453 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms