RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 CLCN7P51798 805 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 ADARP55265 1226 aaKnown RBP10.45□□□□□ -0.74
SF3A1-203ENST00000444440 RPS15P62841 145 aaKnown RBP10.45□□□□□ -0.74
SF3A1-203ENST00000444440 MPP1Q00013 466 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 TIAL1Q01085 375 aaKnown RBP eCLIP10.45□□□□□ -0.74
SF3A1-203ENST00000444440 CUL1Q13616 776 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 SLC9A5Q14940 896 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 NCF4Q15080 339 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 TMED2Q15363 201 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 MSS51Q4VC12 460 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 LACTB2Q53H82 288 aaPredicted RBP10.45□□□□□ -0.74
SF3A1-203ENST00000444440 ZNF470Q6ECI4 717 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 MRNIPQ6NTE8 343 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 RHBDD2Q6NTF9 364 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 NEPROQ6NW34 567 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 FIGLAQ6QHK4 219 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 HOOK3Q86VS8 718 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 IGDCC3Q8IVU1 814 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 APLFQ8IW19 511 aaPredicted RBP10.45□□□□□ -0.74
SF3A1-203ENST00000444440 PWWP2AQ96N64 755 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 NAPGQ99747 312 aaPredicted RBP10.45□□□□□ -0.74
SF3A1-203ENST00000444440 WDR83Q9BRX9 315 aaKnown RBP10.45□□□□□ -0.74
SF3A1-203ENST00000444440 PLAC1Q9HBJ0 212 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 EURLQ9NYK6 297 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 PYCARDQ9ULZ3 195 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 DOPEY2Q9Y3R5 2298 aa10.45□□□□□ -0.74
SF3A1-203ENST00000444440 FLNCQ14315 2725 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 CTAGE9A4FU28 777 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 SDR42E2A6NKP2 422 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 ZSCAN9O15535 394 aaPredicted RBP10.44□□□□□ -0.74
SF3A1-203ENST00000444440 ESR1P03372 595 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 ERGP11308 486 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 PKMP14618 531 aaKnown RBP10.44□□□□□ -0.74
SF3A1-203ENST00000444440 FNTAP49354 379 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 ATP1A4Q13733 1029 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 IGFBP7Q16270 282 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 KLHL38Q2WGJ6 581 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 ARMC3Q5W041 872 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 FRMPD2BQ6IN97 320 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 COX15Q7KZN9 410 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 MCATQ8IVS2 390 aaKnown RBP10.44□□□□□ -0.74
SF3A1-203ENST00000444440 GPR135Q8IZ08 494 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 OR2A1Q8NGT9 310 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 SKA2Q8WVK7 121 aaPredicted RBP10.44□□□□□ -0.74
SF3A1-203ENST00000444440 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.44□□□□□ -0.74
SF3A1-203ENST00000444440 RAD51AP1Q96B01 352 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 RUNDC3BQ96NL0 473 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 TCF12Q99081 682 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 MIPEPQ99797 713 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 XAB2Q9HCS7 855 aaKnown RBP10.44□□□□□ -0.74
SF3A1-203ENST00000444440 SLC6A20Q9NP91 592 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 INTS10Q9NVR2 710 aaKnown RBP10.44□□□□□ -0.74
SF3A1-203ENST00000444440 SLC17A6Q9P2U8 582 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 RNF14Q9UBS8 474 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 SLC39A10Q9ULF5 831 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 SNX7Q9UNH6 387 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 PLCL2Q9UPR0 1127 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 SAR1BQ9Y6B6 198 aa10.44□□□□□ -0.74
SF3A1-203ENST00000444440 IGKV1-8A0A0C4DH67 115 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 MAGEB16A2A368 324 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 DNALI1O14645 258 aaPredicted RBP10.43□□□□□ -0.74
SF3A1-203ENST00000444440 PSIP1O75475 530 aaKnown RBP10.43□□□□□ -0.74
SF3A1-203ENST00000444440 USP1O94782 785 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 HAUS5O94927 633 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 RPN2P04844 631 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 CHRM3P20309 590 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 GABRB3P28472 473 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 CASRP41180 1078 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 PAFAH1B1P43034 410 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 CCL11P51671 97 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 PGGT1BP53609 377 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 SNRPNP63162 240 aaKnown RBP10.43□□□□□ -0.74
SF3A1-203ENST00000444440 PTK6Q13882 451 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 PPP1R7Q15435 360 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 SF1Q15637 639 aaKnown RBP10.43□□□□□ -0.74
SF3A1-203ENST00000444440 CYP2A13Q16696 494 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 RNF187Q5TA31 235 aaPredicted RBP10.43□□□□□ -0.74
SF3A1-203ENST00000444440 MLIPQ5VWP3 458 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 PAPD7Q5XG87 772 aaKnown RBP10.43□□□□□ -0.74
SF3A1-203ENST00000444440 TCTN3Q6NUS6 607 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 MRPL14Q6P1L8 145 aaKnown RBP10.43□□□□□ -0.74
SF3A1-203ENST00000444440 SUSD1Q6UWL2 747 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 CYHR1Q6ZMK1 362 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 SDCCAG8Q86SQ7 713 aaPredicted RBP10.43□□□□□ -0.74
SF3A1-203ENST00000444440 PPIL6Q8IXY8 311 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 METTL27Q8N6F8 245 aaPredicted RBP10.43□□□□□ -0.74
SF3A1-203ENST00000444440 PPFIBP2Q8ND30 876 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 OR2L3Q8NG85 312 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 HMGCLL1Q8TB92 370 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 THAP4Q8WY91 577 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 N4BP2L2Q92802 583 aaPredicted RBP10.43□□□□□ -0.74
SF3A1-203ENST00000444440 CAPZA3Q96KX2 299 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 ZNF285Q96NJ3 590 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 PKP4Q99569 1192 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 MESP1Q9BRJ9 268 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 SLC7A5P2Q9GIP4 190 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 ING2Q9H160 280 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 C20orf96Q9NUD7 363 aaPredicted RBP10.43□□□□□ -0.74
SF3A1-203ENST00000444440 SAMD15Q9P1V8 674 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms