RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 PENKP01210 267 aaPredicted RBP4.41□□□□□ -1.7
PFDN4-202ENST00000441080 CSN3P07498 182 aa4.41□□□□□ -1.7
PFDN4-202ENST00000441080 IGHV4-31P0DP07 118 aa4.41□□□□□ -1.7
PFDN4-202ENST00000441080 IRF2P14316 349 aa4.41□□□□□ -1.7
PFDN4-202ENST00000441080 PTAFRP25105 342 aa4.41□□□□□ -1.7
PFDN4-202ENST00000441080 RPL21P46778 160 aaKnown RBP4.41□□□□□ -1.7
PFDN4-202ENST00000441080 GLIPR1P48060 266 aa4.41□□□□□ -1.7
PFDN4-202ENST00000441080 MAZP56270 477 aaKnown RBP4.41□□□□□ -1.7
PFDN4-202ENST00000441080 TAF10Q12962 218 aa4.41□□□□□ -1.7
PFDN4-202ENST00000441080 KRT81Q14533 505 aa4.41□□□□□ -1.7
PFDN4-202ENST00000441080 PSMD6Q15008 389 aa4.41□□□□□ -1.7
PFDN4-202ENST00000441080 RRS1Q15050 365 aaKnown RBP4.41□□□□□ -1.7
PFDN4-202ENST00000441080 GFI1BQ5VTD9 330 aa4.41□□□□□ -1.7
PFDN4-202ENST00000441080 ARHGAP17Q68EM7 881 aa4.41□□□□□ -1.7
PFDN4-202ENST00000441080 PPP1R21Q6ZMI0 780 aa4.41□□□□□ -1.7
PFDN4-202ENST00000441080 ERN2Q76MJ5 926 aaKnown RBP4.41□□□□□ -1.7
PFDN4-202ENST00000441080 Q8NFD4 153 aa4.41□□□□□ -1.7
PFDN4-202ENST00000441080 OR52N5Q8NH56 324 aa4.41□□□□□ -1.7
PFDN4-202ENST00000441080 PIGBQ92521 554 aa4.41□□□□□ -1.7
PFDN4-202ENST00000441080 PRRG4Q9BZD6 226 aa4.41□□□□□ -1.7
PFDN4-202ENST00000441080 VPS33BQ9H267 617 aa4.41□□□□□ -1.7
PFDN4-202ENST00000441080 ZNF696Q9H7X3 374 aa4.41□□□□□ -1.7
PFDN4-202ENST00000441080 PFDN4Q9NQP4 134 aa4.41□□□□□ -1.7
PFDN4-202ENST00000441080 FAM207AQ9NSI2 230 aaPredicted RBP4.41□□□□□ -1.7
PFDN4-202ENST00000441080 INTS9Q9NV88 658 aaKnown RBP4.41□□□□□ -1.7
PFDN4-202ENST00000441080 P4HTMQ9NXG6 502 aa4.41□□□□□ -1.7
PFDN4-202ENST00000441080 DDX43Q9NXZ2 648 aaKnown RBP4.41□□□□□ -1.7
PFDN4-202ENST00000441080 WDR83OSQ9Y284 106 aa4.41□□□□□ -1.7
PFDN4-202ENST00000441080 LIPGQ9Y5X9 500 aa4.41□□□□□ -1.7
PFDN4-202ENST00000441080 C2orf81A6NN90 581 aa4.4□□□□□ -1.71
PFDN4-202ENST00000441080 HHLA1C9JL84 531 aa4.4□□□□□ -1.71
PFDN4-202ENST00000441080 ARPC2O15144 300 aa4.4□□□□□ -1.71
PFDN4-202ENST00000441080 NADKO95544 446 aaPredicted RBP4.4□□□□□ -1.71
PFDN4-202ENST00000441080 QDPRP09417 244 aa4.4□□□□□ -1.71
PFDN4-202ENST00000441080 WNT5AP41221 380 aa4.4□□□□□ -1.71
PFDN4-202ENST00000441080 ALDH3A2P51648 485 aa4.4□□□□□ -1.71
PFDN4-202ENST00000441080 MZT1Q08AG7 82 aa4.4□□□□□ -1.71
PFDN4-202ENST00000441080 PPIGQ13427 754 aaKnown RBP eCLIP4.4□□□□□ -1.71
PFDN4-202ENST00000441080 RBM39Q14498 530 aaKnown RBP4.4□□□□□ -1.71
PFDN4-202ENST00000441080 FFAR4Q5NUL3 377 aa4.4□□□□□ -1.71
PFDN4-202ENST00000441080 C20orf194Q5TEA3 1177 aa4.4□□□□□ -1.71
PFDN4-202ENST00000441080 ARHGAP11AQ6P4F7 1023 aa4.4□□□□□ -1.71
PFDN4-202ENST00000441080 ZNF449Q6P9G9 518 aa4.4□□□□□ -1.71
PFDN4-202ENST00000441080 ADCK2Q7Z695 626 aa4.4□□□□□ -1.71
PFDN4-202ENST00000441080 PIGZQ86VD9 579 aa4.4□□□□□ -1.71
PFDN4-202ENST00000441080 LGI2Q8N0V4 545 aa4.4□□□□□ -1.71
PFDN4-202ENST00000441080 RYBPQ8N488 228 aaPredicted RBP4.4□□□□□ -1.71
PFDN4-202ENST00000441080 BMPERQ8N8U9 685 aa4.4□□□□□ -1.71
PFDN4-202ENST00000441080 IQUBQ8NA54 791 aa4.4□□□□□ -1.71
PFDN4-202ENST00000441080 OR4K1Q8NGD4 311 aa4.4□□□□□ -1.71
PFDN4-202ENST00000441080 EXT2Q93063 718 aa4.4□□□□□ -1.71
PFDN4-202ENST00000441080 LGALS12Q96DT0 336 aa4.4□□□□□ -1.71
PFDN4-202ENST00000441080 SIPA1Q96FS4 1042 aa4.4□□□□□ -1.71
PFDN4-202ENST00000441080 RMDN2Q96LZ7 410 aa4.4□□□□□ -1.71
PFDN4-202ENST00000441080 FZD8Q9H461 694 aa4.4□□□□□ -1.71
PFDN4-202ENST00000441080 WDR81Q562E7 1941 aa4.4□□□□□ -1.71
PFDN4-202ENST00000441080 EDIL3O43854 480 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 SOCS5O75159 536 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 EML2O95834 649 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 HMBSP08397 361 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 EPCAMP16422 314 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 GNB3P16520 340 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 MAGEA11P43364 429 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 UBASH3AP57075 661 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 HERV-K104P61576 105 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 KLC1Q07866 573 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 SQLEQ14534 574 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 ZNF273Q14593 569 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 NPTX1Q15818 432 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 PHKG1Q16816 387 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 OTUD3Q5T2D3 398 aaPredicted RBP4.39□□□□□ -1.71
PFDN4-202ENST00000441080 OR13C3Q8NGS6 347 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 OR4C3Q8NH37 302 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 VANGL1Q8TAA9 524 aaPredicted RBP4.39□□□□□ -1.71
PFDN4-202ENST00000441080 HPSE2Q8WWQ2 592 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 TMEM190Q8WZ59 177 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 SUSD6Q92537 303 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 NR4A3Q92570 626 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 FAM71F1Q96KD3 344 aaPredicted RBP4.39□□□□□ -1.71
PFDN4-202ENST00000441080 LRR1Q96L50 414 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 RAB3IPQ96QF0 476 aaPredicted RBP4.39□□□□□ -1.71
PFDN4-202ENST00000441080 EGFL8Q99944 293 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 OR2B2Q9GZK3 357 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 CPVLQ9H3G5 476 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 Q9H8V8 135 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 TRPV4Q9HBA0 871 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 XAB2Q9HCS7 855 aaKnown RBP4.39□□□□□ -1.71
PFDN4-202ENST00000441080 SCRT2Q9NQ03 307 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 C2orf42Q9NWW7 574 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 SMCHD1A6NHR9 2005 aa4.39□□□□□ -1.71
PFDN4-202ENST00000441080 TCF20Q9UGU0 1960 aaKnown RBP4.38□□□□□ -1.71
PFDN4-202ENST00000441080 A0A1W2PPK0 400 aa4.38□□□□□ -1.71
PFDN4-202ENST00000441080 KLF11O14901 512 aa4.38□□□□□ -1.71
PFDN4-202ENST00000441080 CDC123O75794 336 aaPredicted RBP4.38□□□□□ -1.71
PFDN4-202ENST00000441080 DFFBO76075 338 aa4.38□□□□□ -1.71
PFDN4-202ENST00000441080 CEACAM1P13688 526 aa4.38□□□□□ -1.71
PFDN4-202ENST00000441080 CSTF2P33240 577 aaKnown RBP eCLIP4.38□□□□□ -1.71
PFDN4-202ENST00000441080 NPY4RP50391 375 aa4.38□□□□□ -1.71
PFDN4-202ENST00000441080 NR0B1P51843 470 aaKnown RBP4.38□□□□□ -1.71
PFDN4-202ENST00000441080 GNB1P62873 340 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms