RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 LIPAP38571 399 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 CTSKP43235 329 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 RENBPP51606 427 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 DGKQP52824 942 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 P2RX3P56373 397 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 GALK2Q01415 458 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 CYP4F3Q08477 520 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 MAD2L1BPQ15013 274 aaPredicted RBP11.62□□□□□ -0.55
LTBR-203ENST00000441074 HABP4Q5JVS0 413 aaKnown RBP11.62□□□□□ -0.55
LTBR-203ENST00000441074 C1orf53Q5VUE5 145 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 RSPO2Q6UXX9 243 aaPredicted RBP11.62□□□□□ -0.55
LTBR-203ENST00000441074 Q6ZSR9 355 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 GPR149Q86SP6 731 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 GRPEL2Q8TAA5 225 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 BCL7CQ8WUZ0 217 aaPredicted RBP11.62□□□□□ -0.55
LTBR-203ENST00000441074 PIK3R3Q92569 461 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 TBC1D20Q96BZ9 403 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 IMP4Q96G21 291 aaKnown RBP11.62□□□□□ -0.55
LTBR-203ENST00000441074 THUMPD3Q9BV44 507 aaKnown RBP11.62□□□□□ -0.55
LTBR-203ENST00000441074 ACTL8Q9H568 366 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 ABCC13Q9NSE7 274 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 ADPRHL2Q9NX46 363 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 QPCTLQ9NXS2 382 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 RNF6Q9Y252 685 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 EYSQ5T1H1 3165 aa11.62□□□□□ -0.55
LTBR-203ENST00000441074 OR51F1A6NGY5 319 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 CCL22O00626 93 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 MAGEA11P43364 429 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 SMN1Q16637 294 aaKnown RBP11.61□□□□□ -0.55
LTBR-203ENST00000441074 SYT16Q17RD7 645 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 TYSND1Q2T9J0 566 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 WDR45BQ5MNZ6 344 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 CYP20A1Q6UW02 462 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 DET1Q7L5Y6 550 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 TSPYL5Q86VY4 417 aaPredicted RBP11.61□□□□□ -0.55
LTBR-203ENST00000441074 GATAD2AQ86YP4 633 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 BEND7Q8N7W2 519 aaPredicted RBP11.61□□□□□ -0.55
LTBR-203ENST00000441074 PEX13Q92968 403 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 FCRL2Q96LA5 508 aaPredicted RBP11.61□□□□□ -0.55
LTBR-203ENST00000441074 TOX2Q96NM4 488 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 DERL2Q9GZP9 239 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 TMEM161AQ9NX61 479 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 NDRG4Q9ULP0 352 aaKnown RBP11.61□□□□□ -0.55
LTBR-203ENST00000441074 SATB2Q9UPW6 733 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 AP3M1Q9Y2T2 418 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 U3KQV3 271 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 MIA3Q5JRA6 1907 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 LOC105371267A0A1B0GV96 52 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 CCRL2O00421 344 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 ANKRD28O15084 1053 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 CAPN5O15484 640 aaPredicted RBP11.61□□□□□ -0.55
LTBR-203ENST00000441074 ECI2O75521 394 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 RPL17P18621 184 aaKnown RBP11.61□□□□□ -0.55
LTBR-203ENST00000441074 GADD45AP24522 165 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 ARL1P40616 181 aaPredicted RBP11.61□□□□□ -0.55
LTBR-203ENST00000441074 NRIP1P48552 1158 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 SLC11A1P49279 550 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 STARD3Q14849 445 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 RBBP7Q16576 425 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 SNAP47Q5SQN1 464 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 CPZQ66K79 652 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 ERAP2Q6P179 960 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 UTS2BQ765I0 119 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 VN1R5Q7Z5H4 357 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 KBTBD8Q8NFY9 601 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 OR56A4Q8NGH8 313 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 VWCEQ96DN2 955 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 SH3GL1Q99961 368 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 GDF15Q99988 308 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 SYTL2Q9HCH5 934 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 PCTPQ9UKL6 214 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 LRFN2Q9ULH4 789 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 NYNRINQ9P2P1 1898 aaKnown RBP11.61□□□□□ -0.55
LTBR-203ENST00000441074 CEP290O15078 2479 aa11.61□□□□□ -0.55
LTBR-203ENST00000441074 FAM25AB3EWG3 89 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 FAM25CB3EWG5 89 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 FAM25GB3EWG6 89 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 M0R082 166 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 CREG1O75629 220 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 RECQL5O94762 991 aaPredicted RBP11.6□□□□□ -0.55
LTBR-203ENST00000441074 SEMA3DO95025 777 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 GLP2RO95838 553 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 G6PDP11413 515 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 CYP4B1P13584 511 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 KRT20P35900 424 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 DAPP51397 102 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 CSNK2BP67870 215 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 TSPY1Q01534 308 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 GPR50Q13585 617 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 KIAA0040Q15053 153 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 DUSP7Q16829 419 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 FBXO48Q5FWF7 155 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 RTP2Q5QGT7 225 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 KDM4DQ6B0I6 523 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 GPRIN3Q6ZVF9 776 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 IQCF2Q8IXL9 164 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 PSD4Q8NDX1 1056 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 GPR150Q8NGU9 434 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 AARSD1Q9BTE6 412 aaKnown RBP11.6□□□□□ -0.55
LTBR-203ENST00000441074 CCDC32Q9BV29 185 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms