RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 C1orf54Q8WWF1 131 aa19.92■□□□□ 0.78
CPNE1-219ENST00000440240 ZUFSPQ96AP4 578 aa19.92■□□□□ 0.78
CPNE1-219ENST00000440240 RAD51AP1Q96B01 352 aa19.92■□□□□ 0.78
CPNE1-219ENST00000440240 PANX3Q96QZ0 392 aa19.92■□□□□ 0.78
CPNE1-219ENST00000440240 ILKAPQ9H0C8 392 aaPredicted RBP19.92■□□□□ 0.78
CPNE1-219ENST00000440240 WDR54Q9H977 334 aa19.92■□□□□ 0.78
CPNE1-219ENST00000440240 CHRAC1Q9NRG0 131 aa19.92■□□□□ 0.78
CPNE1-219ENST00000440240 SLC22A11Q9NSA0 550 aa19.92■□□□□ 0.78
CPNE1-219ENST00000440240 IL1RAPL1Q9NZN1 696 aa19.92■□□□□ 0.78
CPNE1-219ENST00000440240 HIVEP3Q5T1R4 2406 aa19.92■□□□□ 0.78
CPNE1-219ENST00000440240 ANKRD12Q6UB98 2062 aa19.91■□□□□ 0.78
CPNE1-219ENST00000440240 TARM1B6A8C7 271 aa19.91■□□□□ 0.78
CPNE1-219ENST00000440240 AP3B1O00203 1094 aa19.91■□□□□ 0.78
CPNE1-219ENST00000440240 RASGRF2O14827 1237 aa19.91■□□□□ 0.78
CPNE1-219ENST00000440240 CD3EAPO15446 510 aaKnown RBP19.91■□□□□ 0.78
CPNE1-219ENST00000440240 KRT86O43790 486 aa19.91■□□□□ 0.78
CPNE1-219ENST00000440240 SNX1Q13596 522 aa19.91■□□□□ 0.78
CPNE1-219ENST00000440240 FAM214AQ32MH5 1076 aa19.91■□□□□ 0.78
CPNE1-219ENST00000440240 RAB42Q8N4Z0 105 aa19.91■□□□□ 0.78
CPNE1-219ENST00000440240 CISD2Q8N5K1 135 aaKnown RBP19.91■□□□□ 0.78
CPNE1-219ENST00000440240 C19orf60Q96EN9 201 aa19.91■□□□□ 0.78
CPNE1-219ENST00000440240 IL17FQ96PD4 163 aa19.91■□□□□ 0.78
CPNE1-219ENST00000440240 SLC26A1Q9H2B4 701 aa19.91■□□□□ 0.78
CPNE1-219ENST00000440240 ENAMQ9NRM1 1142 aa19.91■□□□□ 0.78
CPNE1-219ENST00000440240 ASF1BQ9NVP2 202 aa19.91■□□□□ 0.78
CPNE1-219ENST00000440240 PCSK5Q92824 1860 aa19.9■□□□□ 0.78
CPNE1-219ENST00000440240 DSCR3O14972 297 aa19.9■□□□□ 0.78
CPNE1-219ENST00000440240 SRPX2O60687 465 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-219ENST00000440240 ETS1P14921 441 aa19.9■□□□□ 0.78
CPNE1-219ENST00000440240 GRIA3P42263 894 aa19.9■□□□□ 0.78
CPNE1-219ENST00000440240 C4orf22Q6V702 233 aa19.9■□□□□ 0.78
CPNE1-219ENST00000440240 LDB1Q86U70 411 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-219ENST00000440240 LRRC6Q86X45 466 aa19.9■□□□□ 0.78
CPNE1-219ENST00000440240 KRT222Q8N1A0 295 aa19.9■□□□□ 0.78
CPNE1-219ENST00000440240 MPP5Q8N3R9 675 aa19.9■□□□□ 0.78
CPNE1-219ENST00000440240 LKAAEAR1Q8TD35 194 aa19.9■□□□□ 0.78
CPNE1-219ENST00000440240 TSGA10Q9BZW7 698 aa19.9■□□□□ 0.78
CPNE1-219ENST00000440240 MRM3Q9HC36 420 aaKnown RBP19.9■□□□□ 0.78
CPNE1-219ENST00000440240 CUTCQ9NTM9 273 aa19.9■□□□□ 0.78
CPNE1-219ENST00000440240 CIDEBQ9UHD4 219 aa19.9■□□□□ 0.78
CPNE1-219ENST00000440240 GNPTGQ9UJJ9 305 aa19.9■□□□□ 0.78
CPNE1-219ENST00000440240 NXT1Q9UKK6 140 aaKnown RBP19.9■□□□□ 0.78
CPNE1-219ENST00000440240 TTC7AQ9ULT0 858 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-219ENST00000440240 COPG1Q9Y678 874 aaKnown RBP19.9■□□□□ 0.78
CPNE1-219ENST00000440240 CCDC88CQ9P219 2028 aa19.9■□□□□ 0.78
CPNE1-219ENST00000440240 NDUFS3O75489 264 aa19.89■□□□□ 0.77
CPNE1-219ENST00000440240 CBX6O95503 412 aa19.89■□□□□ 0.77
CPNE1-219ENST00000440240 ITGA3P26006 1051 aa19.89■□□□□ 0.77
CPNE1-219ENST00000440240 NPY2RP49146 381 aa19.89■□□□□ 0.77
CPNE1-219ENST00000440240 FOXL2P58012 376 aa19.89■□□□□ 0.77
CPNE1-219ENST00000440240 NR6A1Q15406 480 aa19.89■□□□□ 0.77
CPNE1-219ENST00000440240 NKG7Q16617 165 aa19.89■□□□□ 0.77
CPNE1-219ENST00000440240 DOPEY1Q5JWR5 2465 aa19.89■□□□□ 0.77
CPNE1-219ENST00000440240 FCRL6Q6DN72 434 aa19.89■□□□□ 0.77
CPNE1-219ENST00000440240 Q6ZS92 163 aa19.89■□□□□ 0.77
CPNE1-219ENST00000440240 OTOAQ7RTW8 1153 aa19.89■□□□□ 0.77
CPNE1-219ENST00000440240 PRUNE1Q86TP1 453 aa19.89■□□□□ 0.77
CPNE1-219ENST00000440240 TAX1BP1Q86VP1 789 aa19.89■□□□□ 0.77
CPNE1-219ENST00000440240 TTC29Q8NA56 475 aaPredicted RBP19.89■□□□□ 0.77
CPNE1-219ENST00000440240 MAGEC3Q8TD91 643 aa19.89■□□□□ 0.77
CPNE1-219ENST00000440240 VPS50Q96JG6 964 aa19.89■□□□□ 0.77
CPNE1-219ENST00000440240 ZNF285Q96NJ3 590 aa19.89■□□□□ 0.77
CPNE1-219ENST00000440240 SELENOSQ9BQE4 189 aa19.89■□□□□ 0.77
CPNE1-219ENST00000440240 IL22Q9GZX6 179 aa19.89■□□□□ 0.77
CPNE1-219ENST00000440240 P2RY12Q9H244 342 aa19.89■□□□□ 0.77
CPNE1-219ENST00000440240 EIF2B3Q9NR50 452 aaKnown RBP19.89■□□□□ 0.77
CPNE1-219ENST00000440240 MARCH4Q9P2E8 410 aaPredicted RBP19.89■□□□□ 0.77
CPNE1-219ENST00000440240 CDC23Q9UJX2 597 aa19.89■□□□□ 0.77
CPNE1-219ENST00000440240 SNRNP200O75643 2136 aaKnown RBP19.88■□□□□ 0.77
CPNE1-219ENST00000440240 NBPF19A0A087WUL8 3843 aa19.88■□□□□ 0.77
CPNE1-219ENST00000440240 PRICKLE3O43900 615 aaPredicted RBP19.88■□□□□ 0.77
CPNE1-219ENST00000440240 RPL22P35268 128 aaKnown RBP19.88■□□□□ 0.77
CPNE1-219ENST00000440240 CCNFP41002 786 aa19.88■□□□□ 0.77
CPNE1-219ENST00000440240 SESN2P58004 480 aaPredicted RBP19.88■□□□□ 0.77
CPNE1-219ENST00000440240 CCNG2Q16589 344 aa19.88■□□□□ 0.77
CPNE1-219ENST00000440240 IRAK1BP1Q5VVH5 260 aa19.88■□□□□ 0.77
CPNE1-219ENST00000440240 PRAMEF13Q5VWM6 474 aa19.88■□□□□ 0.77
CPNE1-219ENST00000440240 LMNTD1Q8N9Z9 388 aa19.88■□□□□ 0.77
CPNE1-219ENST00000440240 SKA2Q8WVK7 121 aaPredicted RBP19.88■□□□□ 0.77
CPNE1-219ENST00000440240 FOPNLQ96NB1 174 aa19.88■□□□□ 0.77
CPNE1-219ENST00000440240 TREX1Q9NSU2 369 aa19.88■□□□□ 0.77
CPNE1-219ENST00000440240 BFARQ9NZS9 450 aa19.88■□□□□ 0.77
CPNE1-219ENST00000440240 FBXL4Q9UKA2 621 aa19.88■□□□□ 0.77
CPNE1-219ENST00000440240 GUCA1BQ9UMX6 200 aa19.88■□□□□ 0.77
CPNE1-219ENST00000440240 DRG1Q9Y295 367 aaKnown RBP19.88■□□□□ 0.77
CPNE1-219ENST00000440240 CNTRLQ7Z7A1 2325 aa19.87■□□□□ 0.77
CPNE1-219ENST00000440240 CENPEQ02224 2701 aa19.87■□□□□ 0.77
CPNE1-219ENST00000440240 FITM1A5D6W6 292 aa19.87■□□□□ 0.77
CPNE1-219ENST00000440240 MASP2O00187 686 aa19.87■□□□□ 0.77
CPNE1-219ENST00000440240 C1orf105O95561 183 aa19.87■□□□□ 0.77
CPNE1-219ENST00000440240 ZSCAN5DPP0CG00 497 aa19.87■□□□□ 0.77
CPNE1-219ENST00000440240 ITGAXP20702 1163 aa19.87■□□□□ 0.77
CPNE1-219ENST00000440240 RPS3P23396 243 aaKnown RBP eCLIP19.87■□□□□ 0.776e-8■■■□□ 18.1
CPNE1-219ENST00000440240 GLRBP48167 497 aa19.87■□□□□ 0.77
CPNE1-219ENST00000440240 ELOAQ14241 798 aaKnown RBP19.87■□□□□ 0.77
CPNE1-219ENST00000440240 RPS6KA1Q15418 735 aa19.87■□□□□ 0.77
CPNE1-219ENST00000440240 CRB2Q5IJ48 1285 aa19.87■□□□□ 0.77
CPNE1-219ENST00000440240 AGAP7PQ5VUJ5 663 aa19.87■□□□□ 0.77
CPNE1-219ENST00000440240 DRICH1Q6PGQ1 229 aaPredicted RBP19.87■□□□□ 0.77
CPNE1-219ENST00000440240 SDCCAG8Q86SQ7 713 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms