RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 PHGDHO43175 533 aaKnown RBP18.79■□□□□ 0.6
SEMA3B-206ENST00000439487 PRICKLE3O43900 615 aaPredicted RBP18.79■□□□□ 0.6
SEMA3B-206ENST00000439487 SLC16A8O95907 504 aa18.79■□□□□ 0.6
SEMA3B-206ENST00000439487 ERGP11308 486 aa18.79■□□□□ 0.6
SEMA3B-206ENST00000439487 CYP2A7P20853 494 aa18.79■□□□□ 0.6
SEMA3B-206ENST00000439487 PSMB5P28074 263 aa18.79■□□□□ 0.6
SEMA3B-206ENST00000439487 OAS2P29728 719 aaKnown RBP18.79■□□□□ 0.6
SEMA3B-206ENST00000439487 PNLIPRP1P54315 467 aa18.79■□□□□ 0.6
SEMA3B-206ENST00000439487 PCBP4P57723 403 aaKnown RBP18.79■□□□□ 0.6
SEMA3B-206ENST00000439487 SP140Q13342 867 aa18.79■□□□□ 0.6
SEMA3B-206ENST00000439487 PHKG1Q16816 387 aa18.79■□□□□ 0.6
SEMA3B-206ENST00000439487 CEACAM20Q6UY09 585 aa18.79■□□□□ 0.6
SEMA3B-206ENST00000439487 ZFAND4Q86XD8 727 aa18.79■□□□□ 0.6
SEMA3B-206ENST00000439487 PPFIBP2Q8ND30 876 aa18.79■□□□□ 0.6
SEMA3B-206ENST00000439487 SNIP1Q8TAD8 396 aaKnown RBP18.79■□□□□ 0.6
SEMA3B-206ENST00000439487 MCOLN3Q8TDD5 553 aa18.79■□□□□ 0.6
SEMA3B-206ENST00000439487 SLC22A18Q96BI1 424 aa18.79■□□□□ 0.6
SEMA3B-206ENST00000439487 RNF31Q96EP0 1072 aa18.79■□□□□ 0.6
SEMA3B-206ENST00000439487 NAF1Q96HR8 494 aaKnown RBP18.79■□□□□ 0.6
SEMA3B-206ENST00000439487 TXLNGYQ9BZA5 131 aa18.79■□□□□ 0.6
SEMA3B-206ENST00000439487 PARVBQ9HBI1 364 aa18.79■□□□□ 0.6
SEMA3B-206ENST00000439487 BTRCQ9Y297 605 aa18.79■□□□□ 0.6
SEMA3B-206ENST00000439487 KLHL20Q9Y2M5 609 aa18.79■□□□□ 0.6
SEMA3B-206ENST00000439487 A0A087WUV0 522 aaPredicted RBP18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 WISP3O95389 354 aaPredicted RBP18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 STMN1P16949 149 aa18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 TNFRSF8P28908 595 aa18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 TSTA3Q13630 321 aaPredicted RBP18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 BMPR2Q13873 1038 aa18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 ARHGAP19Q14CB8 494 aa18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 SF1Q15637 639 aaKnown RBP18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 GPR19Q15760 415 aa18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 ZIC1Q15915 447 aa18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 ST3GAL2Q16842 350 aa18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 TMTC4Q5T4D3 741 aa18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 MROH9Q5TGP6 573 aa18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 SUSD1Q6UWL2 747 aa18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 MBOAT1Q6ZNC8 495 aa18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 TRMT10CQ7L0Y3 403 aaKnown RBP18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 CMC1Q7Z7K0 106 aa18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 C19orf47Q8N9M1 422 aaKnown RBP18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 EIF1ADQ8N9N8 165 aaKnown RBP18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 ZNF480Q8WV37 535 aa18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 DCBLD2Q96PD2 775 aa18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 ASPSCR1Q9BZE9 553 aa18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 UNKQ9C0B0 810 aaKnown RBP18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 B3GNT4Q9C0J1 378 aa18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 PDE7BQ9NP56 450 aa18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.78■□□□□ 0.67e-13■□□□□ 10.5
SEMA3B-206ENST00000439487 V9GYY5 206 aaPredicted RBP18.78■□□□□ 0.6
SEMA3B-206ENST00000439487 POC1B-GALNT4F8VUJ3 575 aa18.77■□□□□ 0.6
SEMA3B-206ENST00000439487 CDC7O00311 574 aa18.77■□□□□ 0.6
SEMA3B-206ENST00000439487 RIPK2O43353 540 aa18.77■□□□□ 0.6
SEMA3B-206ENST00000439487 IMPA1P29218 277 aa18.77■□□□□ 0.6
SEMA3B-206ENST00000439487 GMPRP36959 345 aa18.77■□□□□ 0.6
SEMA3B-206ENST00000439487 HSD17B2P37059 387 aa18.77■□□□□ 0.6
SEMA3B-206ENST00000439487 EIF2S3P41091 472 aaKnown RBP18.77■□□□□ 0.6
SEMA3B-206ENST00000439487 RAB10P61026 200 aa18.77■□□□□ 0.6
SEMA3B-206ENST00000439487 ACY1Q03154 408 aa18.77■□□□□ 0.6
SEMA3B-206ENST00000439487 TUBB3Q13509 450 aa18.77■□□□□ 0.6
SEMA3B-206ENST00000439487 ZKSCAN8Q15776 578 aaPredicted RBP18.77■□□□□ 0.6
SEMA3B-206ENST00000439487 SYTL1Q8IYJ3 562 aa18.77■□□□□ 0.6
SEMA3B-206ENST00000439487 SPATA6LQ8N4H0 392 aa18.77■□□□□ 0.6
SEMA3B-206ENST00000439487 SLC44A1Q8WWI5 657 aa18.77■□□□□ 0.6
SEMA3B-206ENST00000439487 SMPDL3AQ92484 453 aa18.77■□□□□ 0.6
SEMA3B-206ENST00000439487 CCDC138Q96M89 665 aa18.77■□□□□ 0.6
SEMA3B-206ENST00000439487 TEFMQ96QE5 360 aaKnown RBP18.77■□□□□ 0.6
SEMA3B-206ENST00000439487 MIPEPQ99797 713 aa18.77■□□□□ 0.6
SEMA3B-206ENST00000439487 ACAT2Q9BWD1 397 aa18.77■□□□□ 0.6
SEMA3B-206ENST00000439487 FAM60AQ9NP50 221 aa18.77■□□□□ 0.6
SEMA3B-206ENST00000439487 FGF21Q9NSA1 209 aa18.77■□□□□ 0.6
SEMA3B-206ENST00000439487 ABCF3Q9NUQ8 709 aa18.77■□□□□ 0.6
SEMA3B-206ENST00000439487 PCDHB11Q9Y5F2 797 aa18.77■□□□□ 0.6
SEMA3B-206ENST00000439487 HMX2A2RU54 273 aa18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 NPEPPSL1A6NEC2 478 aa18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 ZNF839A8K0R7 811 aa18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 E7ENX8 843 aa18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 HIST1H2AGP0C0S8 130 aaPredicted RBP18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 CCDC166P0CW27 439 aa18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 FGF5P12034 268 aa18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 HIST1H2ADP20671 130 aa18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 MAGP20916 626 aa18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 YBX1P67809 324 aaKnown RBP18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 TUBB4BP68371 445 aa18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 TAP2Q03519 686 aa18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 IL11RAQ14626 422 aa18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 KIAA1614Q5VZ46 1190 aa18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 RAPH1Q70E73 1250 aa18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 PPP1R3BQ86XI6 285 aa18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 LRRC56Q8IYG6 542 aaPredicted RBP18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 ZNF248Q8NDW4 579 aa18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 OR2A1Q8NGT9 310 aa18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 HIST1H2AHQ96KK5 128 aa18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 PAFAH2Q99487 392 aa18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 HIST1H2AJQ99878 128 aa18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 ZPBPQ9BS86 351 aa18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 H2AFJQ9BTM1 129 aa18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 STOX2Q9P2F5 926 aaPredicted RBP18.76■□□□□ 0.59
SEMA3B-206ENST00000439487 CTNNAL1Q9UBT7 734 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms