RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 GPS2Q13227 327 aa23.82■■□□□ 1.4
RAPGEF1-206ENST00000438647 ARHGAP19Q14CB8 494 aa23.82■■□□□ 1.4
RAPGEF1-206ENST00000438647 TBR1Q16650 682 aa23.82■■□□□ 1.4
RAPGEF1-206ENST00000438647 CYP2A13Q16696 494 aa23.82■■□□□ 1.4
RAPGEF1-206ENST00000438647 BORAQ6PGQ7 559 aa23.82■■□□□ 1.4
RAPGEF1-206ENST00000438647 LMNTD1Q8N9Z9 388 aa23.82■■□□□ 1.4
RAPGEF1-206ENST00000438647 FBXO15Q8NCQ5 510 aaPredicted RBP23.82■■□□□ 1.4
RAPGEF1-206ENST00000438647 MR1Q95460 341 aa23.82■■□□□ 1.4
RAPGEF1-206ENST00000438647 WDR83Q9BRX9 315 aaKnown RBP23.82■■□□□ 1.4
RAPGEF1-206ENST00000438647 GPR87Q9BY21 358 aa23.82■■□□□ 1.4
RAPGEF1-206ENST00000438647 PLCL2Q9UPR0 1127 aa23.82■■□□□ 1.4
RAPGEF1-206ENST00000438647 UTP11Q9Y3A2 253 aaKnown RBP23.82■■□□□ 1.4
RAPGEF1-206ENST00000438647 MEN1O00255 615 aa23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 AHSGP02765 367 aa23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 PRKAR1AP10644 381 aa23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 RGS4P49798 205 aa23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 RPS15P62841 145 aaKnown RBP23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 MRPS25P82663 173 aaKnown RBP23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 CBLBQ13191 982 aa23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 NAA25Q14CX7 972 aa23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 DEFB110Q30KQ9 67 aa23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 TEDDM1Q5T9Z0 273 aa23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 ZNF517Q6ZMY9 492 aaPredicted RBP23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 ANKMY2Q8IV38 441 aa23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 CPNE9Q8IYJ1 553 aa23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 DSELQ8IZU8 1212 aa23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 SLC38A9Q8NBW4 561 aa23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 FBXO36Q8NEA4 188 aa23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 DENND1AQ8TEH3 1009 aa23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 SEC14L1Q92503 715 aa23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 ZUFSPQ96AP4 578 aa23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 C16orf45Q96MC5 204 aaPredicted RBP23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 NDNQ99608 321 aa23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 DPH2Q9BQC3 489 aaPredicted RBP23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 RAB17Q9H0T7 212 aa23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 DPH5Q9H2P9 285 aa23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 PLAC1Q9HBJ0 212 aa23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 MRPS18BQ9Y676 258 aaKnown RBP23.81■■□□□ 1.4
RAPGEF1-206ENST00000438647 ZNF749O43361 778 aa23.8■■□□□ 1.4
RAPGEF1-206ENST00000438647 ZBTB14O43829 449 aa23.8■■□□□ 1.4
RAPGEF1-206ENST00000438647 PRICKLE3O43900 615 aaPredicted RBP23.8■■□□□ 1.4
RAPGEF1-206ENST00000438647 RECKO95980 971 aa23.8■■□□□ 1.4
RAPGEF1-206ENST00000438647 ERGP11308 486 aa23.8■■□□□ 1.4
RAPGEF1-206ENST00000438647 GABRB3P28472 473 aa23.8■■□□□ 1.4
RAPGEF1-206ENST00000438647 GABRA4P48169 554 aa23.8■■□□□ 1.4
RAPGEF1-206ENST00000438647 ZC3H12BQ5HYM0 836 aaKnown RBP23.8■■□□□ 1.4
RAPGEF1-206ENST00000438647 PRAMEF17Q5VTA0 474 aa23.8■■□□□ 1.4
RAPGEF1-206ENST00000438647 C16orf46Q6P387 395 aa23.8■■□□□ 1.4
RAPGEF1-206ENST00000438647 TLDC1Q6P9B6 456 aa23.8■■□□□ 1.4
RAPGEF1-206ENST00000438647 TRMT10BQ6PF06 316 aaKnown RBP23.8■■□□□ 1.4
RAPGEF1-206ENST00000438647 ZNF572Q7Z3I7 529 aaPredicted RBP23.8■■□□□ 1.4
RAPGEF1-206ENST00000438647 FAM20CQ8IXL6 584 aa23.8■■□□□ 1.4
RAPGEF1-206ENST00000438647 DNAJC22Q8N4W6 341 aa23.8■■□□□ 1.4
RAPGEF1-206ENST00000438647 ASB11Q8WXH4 323 aa23.8■■□□□ 1.4
RAPGEF1-206ENST00000438647 MED8Q96G25 268 aa23.8■■□□□ 1.4
RAPGEF1-206ENST00000438647 PCMTD2Q9NV79 361 aa23.8■■□□□ 1.4
RAPGEF1-206ENST00000438647 IRAK4Q9NWZ3 460 aa23.8■■□□□ 1.4
RAPGEF1-206ENST00000438647 ZFATQ9P243 1243 aa23.8■■□□□ 1.4
RAPGEF1-206ENST00000438647 SPTBP11277 2137 aa23.8■■□□□ 1.4
RAPGEF1-206ENST00000438647 TARM1B6A8C7 271 aa23.79■■□□□ 1.4
RAPGEF1-206ENST00000438647 GFYI3L273 518 aa23.79■■□□□ 1.4
RAPGEF1-206ENST00000438647 ZSCAN9O15535 394 aaPredicted RBP23.79■■□□□ 1.4
RAPGEF1-206ENST00000438647 SFTPCP11686 197 aa23.79■■□□□ 1.4
RAPGEF1-206ENST00000438647 RORAP35398 523 aa23.79■■□□□ 1.4
RAPGEF1-206ENST00000438647 LY6DQ14210 128 aa23.79■■□□□ 1.4
RAPGEF1-206ENST00000438647 LINC00303Q3SY05 128 aa23.79■■□□□ 1.4
RAPGEF1-206ENST00000438647 FAM199XQ6PEV8 388 aaPredicted RBP23.79■■□□□ 1.4
RAPGEF1-206ENST00000438647 FIGLAQ6QHK4 219 aa23.79■■□□□ 1.4
RAPGEF1-206ENST00000438647 ZBED8Q8IZ13 594 aa23.79■■□□□ 1.4
RAPGEF1-206ENST00000438647 SMPDL3AQ92484 453 aa23.79■■□□□ 1.4
RAPGEF1-206ENST00000438647 AKIRIN1Q9H9L7 192 aaPredicted RBP23.79■■□□□ 1.4
RAPGEF1-206ENST00000438647 SRPK3Q9UPE1 567 aa23.79■■□□□ 1.4
RAPGEF1-206ENST00000438647 KALRNO60229 2985 aa23.78■■□□□ 1.4
RAPGEF1-206ENST00000438647 KRT87PA6NCN2 255 aa23.78■■□□□ 1.4
RAPGEF1-206ENST00000438647 EIF3HO15372 352 aaKnown RBP eCLIP23.78■■□□□ 1.4
RAPGEF1-206ENST00000438647 CREG1O75629 220 aa23.78■■□□□ 1.4
RAPGEF1-206ENST00000438647 AGXTP21549 392 aa23.78■■□□□ 1.4
RAPGEF1-206ENST00000438647 MCM3P25205 808 aa23.78■■□□□ 1.4
RAPGEF1-206ENST00000438647 PTPN4P29074 926 aa23.78■■□□□ 1.4
RAPGEF1-206ENST00000438647 CAV1Q03135 178 aa23.78■■□□□ 1.4
RAPGEF1-206ENST00000438647 MGAT5Q09328 741 aa23.78■■□□□ 1.4
RAPGEF1-206ENST00000438647 FASTKD3Q14CZ7 662 aaKnown RBP23.78■■□□□ 1.4
RAPGEF1-206ENST00000438647 DUPD1Q68J44 220 aa23.78■■□□□ 1.4
RAPGEF1-206ENST00000438647 CYHR1Q6ZMK1 362 aa23.78■■□□□ 1.4
RAPGEF1-206ENST00000438647 PALM2Q8IXS6 379 aa23.78■■□□□ 1.4
RAPGEF1-206ENST00000438647 SYTL1Q8IYJ3 562 aa23.78■■□□□ 1.4
RAPGEF1-206ENST00000438647 OR2L3Q8NG85 312 aa23.78■■□□□ 1.4
RAPGEF1-206ENST00000438647 PYROXD1Q8WU10 500 aa23.78■■□□□ 1.4
RAPGEF1-206ENST00000438647 CHST8Q9H2A9 424 aa23.78■■□□□ 1.4
RAPGEF1-206ENST00000438647 ACTL8Q9H568 366 aa23.78■■□□□ 1.4
RAPGEF1-206ENST00000438647 EURLQ9NYK6 297 aa23.78■■□□□ 1.4
RAPGEF1-206ENST00000438647 CDC23Q9UJX2 597 aa23.78■■□□□ 1.4
RAPGEF1-206ENST00000438647 KLHL20Q9Y2M5 609 aa23.78■■□□□ 1.4
RAPGEF1-206ENST00000438647 KLK4Q9Y5K2 254 aa23.78■■□□□ 1.4
RAPGEF1-206ENST00000438647 SNRNP200O75643 2136 aaKnown RBP23.78■■□□□ 1.4
RAPGEF1-206ENST00000438647 RAB40ALP0C0E4 278 aa23.77■■□□□ 1.4
RAPGEF1-206ENST00000438647 PSMB5P28074 263 aa23.77■■□□□ 1.4
RAPGEF1-206ENST00000438647 CMPK1P30085 196 aa23.77■■□□□ 1.4
RAPGEF1-206ENST00000438647 CCR10P46092 362 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms