RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 CCNDBP1O95273 360 aa13.05□□□□□ -0.32
EXT1-203ENST00000437196 RPLP0P05388 317 aaKnown RBP13.05□□□□□ -0.32
EXT1-203ENST00000437196 CHRM5P08912 532 aaPredicted RBP13.05□□□□□ -0.32
EXT1-203ENST00000437196 NCF1P14598 390 aaPredicted RBP13.05□□□□□ -0.32
EXT1-203ENST00000437196 TYRP1P17643 537 aa13.05□□□□□ -0.32
EXT1-203ENST00000437196 ATP5F1P24539 256 aaPredicted RBP13.05□□□□□ -0.32
EXT1-203ENST00000437196 RPA3P35244 121 aaPredicted RBP13.05□□□□□ -0.32
EXT1-203ENST00000437196 GGT5P36269 586 aa13.05□□□□□ -0.32
EXT1-203ENST00000437196 GMPRP36959 345 aa13.05□□□□□ -0.32
EXT1-203ENST00000437196 SLC18A1P54219 525 aa13.05□□□□□ -0.32
EXT1-203ENST00000437196 MAGOHP61326 146 aaKnown RBP13.05□□□□□ -0.32
EXT1-203ENST00000437196 NAA20P61599 178 aa13.05□□□□□ -0.32
EXT1-203ENST00000437196 TAP2Q03519 686 aa13.05□□□□□ -0.32
EXT1-203ENST00000437196 ASPHQ12797 758 aa13.05□□□□□ -0.32
EXT1-203ENST00000437196 SPIDRQ14159 915 aa13.05□□□□□ -0.32
EXT1-203ENST00000437196 AMZ1Q400G9 498 aa13.05□□□□□ -0.32
EXT1-203ENST00000437196 THEMIS2Q5TEJ8 643 aa13.05□□□□□ -0.32
EXT1-203ENST00000437196 SPNS2Q8IVW8 549 aa13.05□□□□□ -0.32
EXT1-203ENST00000437196 TCP10LQ8TDR4 215 aa13.05□□□□□ -0.32
EXT1-203ENST00000437196 DENND1AQ8TEH3 1009 aa13.05□□□□□ -0.32
EXT1-203ENST00000437196 NCSTNQ92542 709 aa13.05□□□□□ -0.32
EXT1-203ENST00000437196 HAUS8Q9BT25 410 aa13.05□□□□□ -0.32
EXT1-203ENST00000437196 CAPS2Q9BXY5 557 aa13.05□□□□□ -0.32
EXT1-203ENST00000437196 XKR8Q9H6D3 395 aa13.05□□□□□ -0.32
EXT1-203ENST00000437196 KCNK9Q9NPC2 374 aa13.05□□□□□ -0.32
EXT1-203ENST00000437196 CPSF2Q9P2I0 782 aaKnown RBP13.05□□□□□ -0.32
EXT1-203ENST00000437196 PCDHB11Q9Y5F2 797 aa13.05□□□□□ -0.32
EXT1-203ENST00000437196 TMX2-CTNND1H3BSU7 103 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 STX16-NPEPL1H3BU86 382 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 STX16O14662 325 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 TOX3O15405 576 aaPredicted RBP13.04□□□□□ -0.32
EXT1-203ENST00000437196 MAP3K7O43318 606 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 KLK8O60259 260 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 PLIN3O60664 434 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 SPAG7O75391 227 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 STK16O75716 305 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 TOP3BO95985 862 aaKnown RBP13.04□□□□□ -0.32
EXT1-203ENST00000437196 PROCP04070 461 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 MYL2P10916 166 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 POLR2CP19387 275 aaPredicted RBP13.04□□□□□ -0.32
EXT1-203ENST00000437196 CD1CP29017 333 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 OAS2P29728 719 aaKnown RBP13.04□□□□□ -0.32
EXT1-203ENST00000437196 KCNC1P48547 511 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 PIK3CGP48736 1102 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 NOVA1P51513 510 aaKnown RBP13.04□□□□□ -0.32
EXT1-203ENST00000437196 CCL7P80098 99 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 NFKB2Q00653 900 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 NAE1Q13564 534 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 TSTA3Q13630 321 aaPredicted RBP13.04□□□□□ -0.32
EXT1-203ENST00000437196 PFKFB4Q16877 469 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 RSPO4Q2I0M5 234 aaPredicted RBP13.04□□□□□ -0.32
EXT1-203ENST00000437196 C16orf46Q6P387 395 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 TMEM71Q6P5X7 295 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 CDHR3Q6ZTQ4 885 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 ALYREFQ86V81 257 aaKnown RBP13.04□□□□□ -0.32
EXT1-203ENST00000437196 ADGRF3Q8IZF5 1079 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 OR56A3Q8NH54 315 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 MED8Q96G25 268 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 IL17FQ96PD4 163 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 SYNDIG1Q9H7V2 258 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 INTS7Q9NVH2 962 aaKnown RBP13.04□□□□□ -0.32
EXT1-203ENST00000437196 NKIRAS1Q9NYS0 192 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 ACTR10Q9NZ32 417 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 CIDEBQ9UHD4 219 aa13.04□□□□□ -0.32
EXT1-203ENST00000437196 PTBP2Q9UKA9 531 aaKnown RBP13.04□□□□□ -0.32
EXT1-203ENST00000437196 TARM1B6A8C7 271 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 BTN3A3O00478 584 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 NTN3O00634 580 aaPredicted RBP13.03□□□□□ -0.32
EXT1-203ENST00000437196 CAPN5O15484 640 aaPredicted RBP13.03□□□□□ -0.32
EXT1-203ENST00000437196 MTHFD2P13995 350 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 CPA3P15088 417 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 HRH2P25021 359 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 CMPK1P30085 196 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 TBPL1P62380 186 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 ABATP80404 500 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 SIM1P81133 766 aaPredicted RBP13.03□□□□□ -0.32
EXT1-203ENST00000437196 SETDB1Q15047 1291 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 SF1Q15637 639 aaKnown RBP13.03□□□□□ -0.32
EXT1-203ENST00000437196 IRGCQ6NXR0 463 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 MBOAT1Q6ZNC8 495 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 KLHDC8AQ8IYD2 350 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 TMEM151AQ8N4L1 468 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 LINC01555Q8NAE3 123 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 OR4D9Q8NGE8 314 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 UBTD2Q8WUN7 234 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 JPH3Q8WXH2 748 aaPredicted RBP13.03□□□□□ -0.32
EXT1-203ENST00000437196 RSC1A1Q92681 617 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 ARL8AQ96BM9 186 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 FAM111AQ96PZ2 611 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 TWSG1Q9GZX9 223 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 ATG10Q9H0Y0 220 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 COPG2Q9UBF2 871 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 POMT2Q9UKY4 750 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 KCNE2Q9Y6J6 123 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 DMXL1Q9Y485 3027 aa13.03□□□□□ -0.32
EXT1-203ENST00000437196 KNTC1P50748 2209 aa13.02□□□□□ -0.32
EXT1-203ENST00000437196 TLCD2A6NGC4 264 aa13.02□□□□□ -0.33
EXT1-203ENST00000437196 KATNA1O75449 491 aa13.02□□□□□ -0.33
EXT1-203ENST00000437196 PRDX3P30048 256 aaKnown RBP13.02□□□□□ -0.33
EXT1-203ENST00000437196 PRKAA2P54646 552 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms