RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 NDRG4Q9ULP0 352 aaKnown RBP11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 TBC1D24Q9ULP9 559 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 NEU3Q9UQ49 428 aa11.28□□□□□ -0.6
HMGCS1-202ENST00000433297 NUP214P35658 2090 aaPredicted RBP11.27□□□□□ -0.6
HMGCS1-202ENST00000433297 EFCAB10A6NFE3 127 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 TSC22D2O75157 780 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 YES1P07947 543 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 MMP2P08253 660 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 COL6A1P12109 1028 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 TNFSF8P32971 234 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 ADCYAP1R1P41586 468 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 HSPA7P48741 367 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 UGT2B15P54855 530 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 IL2P60568 153 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 ARHGAP1Q07960 439 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 SMARCB1Q12824 385 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 IRF3Q14653 427 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 SETMARQ53H47 684 aaPredicted RBP11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 RUNDC3AQ59EK9 446 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 FAM171A1Q5VUB5 890 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 KDM4DQ6B0I6 523 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 TWF2Q6IBS0 349 aaKnown RBP11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 CIR1Q86X95 450 aaPredicted RBP11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 LINC01465Q8N7H1 131 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 RTL3Q8N8U3 475 aaKnown RBP11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 SIMC1Q8NDZ2 872 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 GRPEL2Q8TAA5 225 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 PIK3R3Q92569 461 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 CNPPD1Q9BV87 410 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 REEP1Q9H902 201 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 TXNRD2Q9NNW7 524 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 RAD18Q9NS91 495 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 HS3ST4Q9Y661 456 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 VPS26AO75436 327 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 PTHP01270 115 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 CYP2A7P20853 494 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 AQP1P29972 269 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 DNAJA1P31689 397 aaKnown RBP11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 HNF4AP41235 474 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 VLDLRP98155 873 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 CAMK2GQ13555 558 aaPredicted RBP11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 MARCH8Q5T0T0 291 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 BHLHA9Q7RTU4 235 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 SLC46A3Q7Z3Q1 461 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 GOLGA7Q7Z5G4 137 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 CHPFQ8IZ52 775 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 HASPINQ8TF76 798 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 MYLPFQ96A32 169 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 SMARCD1Q96GM5 515 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 PDLIM5Q96HC4 596 aaKnown RBP11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 EGFL8Q99944 293 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 APOL5Q9BWW9 433 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 SIRT5Q9NXA8 310 aa11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 CRNNQ9UBG3 495 aaPredicted RBP11.27□□□□□ -0.61
HMGCS1-202ENST00000433297 MEIS3P2A8K0S8 358 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 STX16O14662 325 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 IRAK2O43187 625 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 FABP3P05413 133 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 ITGB1P05556 798 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 RETP07949 1114 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 FHP07954 510 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 AFF1P51825 1210 aaKnown RBP11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 ZRANB3Q5FWF4 1079 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 SDE2Q6IQ49 451 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 SNX20Q7Z614 316 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 OR52J3Q8NH60 311 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 APH1BQ8WW43 257 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 MYDGFQ969H8 173 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 MAP6Q96JE9 813 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 TSSK3Q96PN8 268 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 SDHCQ99643 169 aaPredicted RBP11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 CLPBQ9H078 707 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 THUMPD1Q9NXG2 353 aaKnown RBP11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 MED16Q9Y2X0 877 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 DNMT3AQ9Y6K1 912 aaPredicted RBP11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 LOC105371267A0A1B0GV96 52 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 H3BM21 787 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 GPR182O15218 404 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 GPR39O43194 453 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 HMBSP08397 361 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 ATXN1LP0C7T5 689 aaKnown RBP11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 RRM2P31350 389 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 DDOSTP39656 456 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 IL12RB1P42701 662 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 MXD1Q05195 221 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 GPR50Q13585 617 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 MFSD10Q14728 455 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 BAK1Q16611 211 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 ALFQ53S48 1182 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 PDE12Q6L8Q7 609 aaKnown RBP11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 PAMR1Q6UXH9 720 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 NKAPQ8N5F7 415 aaKnown RBP11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 CDC26Q8NHZ8 85 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 RASSF5Q8WWW0 418 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 GGHQ92820 318 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 EXOC2Q96KP1 924 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 OR2A14Q96R47 310 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 TM9SF3Q9HD45 589 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 ACTL7AQ9Y615 435 aa11.26□□□□□ -0.61
HMGCS1-202ENST00000433297 CASTOR2A6NHX0 329 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms