RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 NAGLUP54802 743 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 ERVK11-1P61568 191 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 PSMC6P62333 389 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 DLK1P80370 383 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 MAT1AQ00266 395 aaKnown RBP1.96□□□□□ -2.1
CDC40-204ENST00000431461 ILF2Q12905 390 aaKnown RBP1.96□□□□□ -2.1
CDC40-204ENST00000431461 BFSP1Q12934 665 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 SGCGQ13326 291 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 PPIGQ13427 754 aaKnown RBP eCLIP1.96□□□□□ -2.1
CDC40-204ENST00000431461 ITGA9Q13797 1035 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 RBBP5Q15291 538 aaKnown RBP1.96□□□□□ -2.1
CDC40-204ENST00000431461 NPTX1Q15818 432 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 CDO1Q16878 200 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 VWC2Q2TAL6 325 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 ZC2HC1CQ53FD0 456 aaPredicted RBP1.96□□□□□ -2.1
CDC40-204ENST00000431461 SYT14P1Q58G82 188 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 WDR38Q5JTN6 314 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 KRBOX4Q5JUW0 171 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 C6orf136Q5SQH8 315 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 LCE3EQ5T5B0 92 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 CYP4A22Q5TCH4 519 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 TEX38Q6PEX7 206 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 RBMS3Q6XE24 437 aaKnown RBP1.96□□□□□ -2.1
CDC40-204ENST00000431461 ZBTB49Q6ZSB9 765 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 TRPT1Q86TN4 253 aaKnown RBP1.96□□□□□ -2.1
CDC40-204ENST00000431461 AMIGO1Q86WK6 493 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 PI4KAP1Q8N8J0 262 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 RASGEF1AQ8N9B8 481 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 WDSUB1Q8N9V3 476 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 OR13C3Q8NGS6 347 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 OR52N5Q8NH56 324 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 KIF18AQ8NI77 898 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 FAM76AQ8TAV0 307 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 SPATA20Q8TB22 786 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 HCAR2Q8TDS4 363 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 LRRC8CQ8TDW0 803 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 DEPDC1BQ8WUY9 529 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 DYRK2Q92630 601 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 SYN2Q92777 582 aaPredicted RBP1.96□□□□□ -2.1
CDC40-204ENST00000431461 EXT2Q93063 718 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 TMEM143Q96AN5 459 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 SPSB1Q96BD6 273 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 ANKRD9Q96BM1 317 aaPredicted RBP1.96□□□□□ -2.1
CDC40-204ENST00000431461 NXNL1Q96CM4 212 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 RADILQ96JH8 1075 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 PCYT2Q99447 389 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 FEVQ99581 238 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 RAD9AQ99638 391 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 TRIM51Q9BSJ1 452 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 URM1Q9BTM9 101 aaKnown RBP1.96□□□□□ -2.1
CDC40-204ENST00000431461 RBM4Q9BWF3 364 aaKnown RBP1.96□□□□□ -2.1
CDC40-204ENST00000431461 GFRA4Q9GZZ7 299 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 ZMYND12Q9H0C1 365 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 XAB2Q9HCS7 855 aaKnown RBP1.96□□□□□ -2.1
CDC40-204ENST00000431461 GSN-AS1Q9NRJ2 163 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 PRMT7Q9NVM4 692 aaPredicted RBP1.96□□□□□ -2.1
CDC40-204ENST00000431461 OR6C2Q9NZP2 312 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 TBC1D7Q9P0N9 293 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 B3GAT1Q9P2W7 334 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 SMAD5-AS1Q9Y6J3 95 aa1.96□□□□□ -2.1
CDC40-204ENST00000431461 IQCMA0A1B0GVH7 501 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 C5orf60A6NFR6 353 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 SNX3O60493 162 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 SYNCRIPO60506 623 aaKnown RBP1.95□□□□□ -2.1
CDC40-204ENST00000431461 CDK2AP2O75956 126 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 MOCS3O95396 460 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 RPN1P04843 607 aaKnown RBP1.95□□□□□ -2.1
CDC40-204ENST00000431461 VIMP08670 466 aaKnown RBP1.95□□□□□ -2.1
CDC40-204ENST00000431461 TRIM49P0CI25 452 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 TRIM49CP0CI26 452 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 IGHV4-31P0DP07 118 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 PRKAR1AP10644 381 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 HAPLN1P10915 354 aaPredicted RBP1.95□□□□□ -2.1
CDC40-204ENST00000431461 HSPA8P11142 646 aaKnown RBP1.95□□□□□ -2.1
CDC40-204ENST00000431461 CASTP20810 708 aaKnown RBP1.95□□□□□ -2.1
CDC40-204ENST00000431461 ACAT1P24752 427 aaKnown RBP1.95□□□□□ -2.1
CDC40-204ENST00000431461 CSTF2P33240 577 aaKnown RBP eCLIP1.95□□□□□ -2.1
CDC40-204ENST00000431461 PTGER4P35408 488 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 GP5P40197 560 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 CETN2P41208 172 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 BMXP51813 675 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 CAPZA1P52907 286 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 CDH11P55287 796 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 TPD52P55327 224 aaPredicted RBP1.95□□□□□ -2.1
CDC40-204ENST00000431461 RBP5P82980 135 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 MYL7Q01449 175 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 RBBP7Q16576 425 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 SGSM1Q2NKQ1 1148 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 ZNF876PQ49A33 203 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 FGD3Q5JSP0 725 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 STXBP5Q5T5C0 1151 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 LCN1P1Q5VSP4 162 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 NOTUMQ6P988 496 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 PSRC1Q6PGN9 363 aaPredicted RBP1.95□□□□□ -2.1
CDC40-204ENST00000431461 CORO6Q6QEF8 472 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 CLEC17AQ6ZS10 378 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 MFSD6Q6ZSS7 791 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 DGLUCYQ7Z3D6 616 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 SPATA21Q7Z572 469 aa1.95□□□□□ -2.1
CDC40-204ENST00000431461 VSIG1Q86XK7 387 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms