RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 ZNF148Q9UQR1 794 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 DOCK10Q96BY6 2186 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 NOTCH2Q04721 2471 aa14.3□□□□□ -0.12
MSH5-208ENST00000429846 TEX15Q9BXT5 2789 aa14.29□□□□□ -0.12
MSH5-208ENST00000429846 TARM1B6A8C7 271 aa14.29□□□□□ -0.12
MSH5-208ENST00000429846 DSCR3O14972 297 aa14.29□□□□□ -0.12
MSH5-208ENST00000429846 APRTP07741 180 aa14.29□□□□□ -0.12
MSH5-208ENST00000429846 ITGA3P26006 1051 aa14.29□□□□□ -0.12
MSH5-208ENST00000429846 GRIA1P42261 906 aa14.29□□□□□ -0.12
MSH5-208ENST00000429846 GRB7Q14451 532 aa14.29□□□□□ -0.12
MSH5-208ENST00000429846 SEMA3AQ14563 771 aa14.29□□□□□ -0.12
MSH5-208ENST00000429846 Q6ZS92 163 aa14.29□□□□□ -0.12
MSH5-208ENST00000429846 OVCH1Q7RTY7 1134 aa14.29□□□□□ -0.12
MSH5-208ENST00000429846 LRRC6Q86X45 466 aa14.29□□□□□ -0.12
MSH5-208ENST00000429846 RAB42Q8N4Z0 105 aa14.29□□□□□ -0.12
MSH5-208ENST00000429846 CCDC89Q8N998 374 aa14.29□□□□□ -0.12
MSH5-208ENST00000429846 TTC29Q8NA56 475 aaPredicted RBP14.29□□□□□ -0.12
MSH5-208ENST00000429846 LKAAEAR1Q8TD35 194 aa14.29□□□□□ -0.12
MSH5-208ENST00000429846 PPP4R1Q8TF05 950 aa14.29□□□□□ -0.12
MSH5-208ENST00000429846 ZUFSPQ96AP4 578 aa14.29□□□□□ -0.12
MSH5-208ENST00000429846 RAD51AP1Q96B01 352 aa14.29□□□□□ -0.12
MSH5-208ENST00000429846 C19orf60Q96EN9 201 aa14.29□□□□□ -0.12
MSH5-208ENST00000429846 ZNF285Q96NJ3 590 aa14.29□□□□□ -0.12
MSH5-208ENST00000429846 EIF2B3Q9NR50 452 aaKnown RBP14.29□□□□□ -0.12
MSH5-208ENST00000429846 CUTCQ9NTM9 273 aa14.29□□□□□ -0.12
MSH5-208ENST00000429846 ASF1BQ9NVP2 202 aa14.29□□□□□ -0.12
MSH5-208ENST00000429846 FITM1A5D6W6 292 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 AP3B1O00203 1094 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 CBX6O95503 412 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 ATXN8OSP0DMR3 200 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 ITGAXP20702 1163 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 RPS3P23396 243 aaKnown RBP eCLIP14.28□□□□□ -0.12
MSH5-208ENST00000429846 ELOAQ14241 798 aaKnown RBP14.28□□□□□ -0.12
MSH5-208ENST00000429846 NAA25Q14CX7 972 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 NR6A1Q15406 480 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 SF1Q15637 639 aaKnown RBP14.28□□□□□ -0.12
MSH5-208ENST00000429846 NKG7Q16617 165 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 FAM214AQ32MH5 1076 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 PCID2Q5JVF3 399 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 IRAK1BP1Q5VVH5 260 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 PRAMEF13Q5VWM6 474 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 PTRHD1Q6GMV3 140 aaKnown RBP14.28□□□□□ -0.12
MSH5-208ENST00000429846 FIGLAQ6QHK4 219 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 SLC13A5Q86YT5 568 aaPredicted RBP14.28□□□□□ -0.12
MSH5-208ENST00000429846 FAM20CQ8IXL6 584 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 CISD2Q8N5K1 135 aaKnown RBP14.28□□□□□ -0.12
MSH5-208ENST00000429846 CFAP61Q8NHU2 1237 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 SPSB2Q99619 263 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 BARD1Q99728 777 aaKnown RBP14.28□□□□□ -0.12
MSH5-208ENST00000429846 WDR77Q9BQA1 342 aaPredicted RBP14.28□□□□□ -0.12
MSH5-208ENST00000429846 SELENOSQ9BQE4 189 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 DESI2Q9BSY9 194 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 TSGA10Q9BZW7 698 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 SLC6A20Q9NP91 592 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 AGPAT4Q9NRZ5 378 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 CDC23Q9UJX2 597 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 FBXL4Q9UKA2 621 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 KLHL20Q9Y2M5 609 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 PCDHGA10Q9Y5H3 936 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 KLK4Q9Y5K2 254 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 FAM169AQ9Y6X4 670 aa14.28□□□□□ -0.12
MSH5-208ENST00000429846 ANKUB1A6NFN9 424 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 WIPF3A6NGB9 483 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 IQCF5A8MTL0 148 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 CD3EAPO15446 510 aaKnown RBP14.27□□□□□ -0.13
MSH5-208ENST00000429846 KRT86O43790 486 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 SRPX2O60687 465 aaPredicted RBP14.27□□□□□ -0.13
MSH5-208ENST00000429846 RNF224P0DH78 156 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 CCNFP41002 786 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 CRB2Q5IJ48 1285 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 FCRL6Q6DN72 434 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 IGFL2Q6UWQ7 119 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 C4orf22Q6V702 233 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 OTOAQ7RTW8 1153 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 MAMDC2Q7Z304 686 aaPredicted RBP14.27□□□□□ -0.13
MSH5-208ENST00000429846 TAX1BP1Q86VP1 789 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 LURAP1LQ8IV03 231 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 KRT222Q8N1A0 295 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 LMNTD1Q8N9Z9 388 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 HMGCLL1Q8TB92 370 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 MAGEC3Q8TD91 643 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 INPP5DQ92835 1189 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 C5orf34Q96MH7 638 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 FOPNLQ96NB1 174 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 IL17FQ96PD4 163 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 IL22Q9GZX6 179 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 RBSNQ9H1K0 784 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 P2RY12Q9H244 342 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 CHRAC1Q9NRG0 131 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 SEMA3GQ9NS98 782 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 TREX1Q9NSU2 369 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 SLC5A6Q9Y289 635 aa14.27□□□□□ -0.13
MSH5-208ENST00000429846 COPG1Q9Y678 874 aaKnown RBP14.27□□□□□ -0.13
MSH5-208ENST00000429846 A0A0U1RQJ8 604 aa14.26□□□□□ -0.13
MSH5-208ENST00000429846 SOCS6O14544 535 aa14.26□□□□□ -0.13
MSH5-208ENST00000429846 PRICKLE3O43900 615 aaPredicted RBP14.26□□□□□ -0.13
MSH5-208ENST00000429846 C1orf105O95561 183 aa14.26□□□□□ -0.13
MSH5-208ENST00000429846 LDLRP01130 860 aa14.26□□□□□ -0.13
MSH5-208ENST00000429846 GRIA3P42263 894 aa14.26□□□□□ -0.13
MSH5-208ENST00000429846 FOXL2P58012 376 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms