RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 DPY19L1Q2PZI1 675 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 LRIF1Q5T3J3 769 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 TMEM215Q68D42 235 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 NEK5Q6P3R8 708 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 ABRAXAS1Q6UWZ7 409 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 CHRDL2Q6WN34 429 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 DNAJC14Q6Y2X3 702 aaPredicted RBP13.32□□□□□ -0.28
THBS3-202ENST00000428962 Q6ZVL8 140 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 RASGRP3Q8IV61 690 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 RAVER1Q8IY67 606 aaKnown RBP13.32□□□□□ -0.28
THBS3-202ENST00000428962 MICU2Q8IYU8 434 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 ZNF786Q8N393 782 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 CLHC1Q8NHS4 586 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 MAGEE2Q8TD90 523 aaPredicted RBP13.32□□□□□ -0.28
THBS3-202ENST00000428962 GLMNQ92990 594 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 SCAMP4Q969E2 229 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 FAM162AQ96A26 154 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 NMD3Q96D46 503 aaKnown RBP13.32□□□□□ -0.28
THBS3-202ENST00000428962 P2RY13Q9BPV8 354 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 FAM83CQ9BQN1 747 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 SLC22A14Q9Y267 594 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 FADS3Q9Y5Q0 445 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 WNT6Q9Y6F9 365 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 H0YAE9 185 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 PLOD2O00469 737 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 CXCR6O00574 342 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 ZNF197O14709 1029 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 PRMT3O60678 531 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 MTX2O75431 263 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 HPRP00739 348 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 ALBP02768 609 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 CATP04040 527 aaKnown RBP13.32□□□□□ -0.28
THBS3-202ENST00000428962 RETP07949 1114 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 SDC1P18827 310 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 ITPKAP23677 461 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 ETV3P41162 512 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 ALDH3B2P48448 385 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 NRIP1P48552 1158 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 CHIT1Q13231 466 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 PPIGQ13427 754 aaKnown RBP eCLIP13.32□□□□□ -0.28
THBS3-202ENST00000428962 PRSS36Q5K4E3 855 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 CYP2U1Q7Z449 544 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 PATL1Q86TB9 770 aaKnown RBP13.32□□□□□ -0.28
THBS3-202ENST00000428962 MSRB3Q8IXL7 192 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 BEND7Q8N7W2 519 aaPredicted RBP13.32□□□□□ -0.28
THBS3-202ENST00000428962 SP7Q8TDD2 431 aaPredicted RBP13.32□□□□□ -0.28
THBS3-202ENST00000428962 CYB5D2Q8WUJ1 264 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 NUDT8Q8WV74 236 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 BTN2A2Q8WVV5 523 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 TMEM159Q96B96 161 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 SH3GL3Q99963 347 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 CPPED1Q9BRF8 314 aaPredicted RBP13.32□□□□□ -0.28
THBS3-202ENST00000428962 RIOK2Q9BVS4 552 aaKnown RBP13.32□□□□□ -0.28
THBS3-202ENST00000428962 PAIP1Q9H074 479 aaKnown RBP13.32□□□□□ -0.28
THBS3-202ENST00000428962 SLC25A37Q9NYZ2 338 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 LIMD1Q9UGP4 676 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 ADGRE2Q9UHX3 823 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 DLGAP4Q9Y2H0 992 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 RWDD3Q9Y3V2 267 aa13.32□□□□□ -0.28
THBS3-202ENST00000428962 PSMD11O00231 422 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 SGTAO43765 313 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 PSIP1O75475 530 aaKnown RBP13.31□□□□□ -0.28
THBS3-202ENST00000428962 MT-ND1P03886 318 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 ELFN1P0C7U0 828 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 AMD1P17707 334 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 ALDH3A2P51648 485 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 ST8SIA6P61647 398 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 ESRRGP62508 458 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 IRF8Q02556 426 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 UBE3AQ05086 875 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 GPR180Q86V85 440 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 NRSN1Q8IZ57 195 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 NAT16Q8N8M0 369 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 ZFP28Q8NHY6 868 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 POF1BQ8WVV4 589 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 STARD8Q92502 1023 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 NELL1Q92832 810 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 GLYATL1Q969I3 302 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 PYCR2Q96C36 320 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 FAM120BQ96EK7 910 aaKnown RBP13.31□□□□□ -0.28
THBS3-202ENST00000428962 SLC47A1Q96FL8 570 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 CCDC138Q96M89 665 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 RDH12Q96NR8 316 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 RAD9AQ99638 391 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 YTHDF1Q9BYJ9 559 aaKnown RBP13.31□□□□□ -0.28
THBS3-202ENST00000428962 MAGIXQ9H6Y5 334 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 KAT8Q9H7Z6 458 aaKnown RBP13.31□□□□□ -0.28
THBS3-202ENST00000428962 DNAJB9Q9UBS3 223 aa13.31□□□□□ -0.28
THBS3-202ENST00000428962 MBD1Q9UIS9 605 aaPredicted RBP13.31□□□□□ -0.28
THBS3-202ENST00000428962 MYOFQ9NZM1 2061 aa13.3□□□□□ -0.28
THBS3-202ENST00000428962 OR2AG2A6NM03 316 aa13.3□□□□□ -0.28
THBS3-202ENST00000428962 FADS2P1A8MWK0 482 aa13.3□□□□□ -0.28
THBS3-202ENST00000428962 WNT9AO14904 365 aa13.3□□□□□ -0.28
THBS3-202ENST00000428962 GNAO1P09471 354 aa13.3□□□□□ -0.28
THBS3-202ENST00000428962 HSD3B1P14060 373 aa13.3□□□□□ -0.28
THBS3-202ENST00000428962 IL1RNP18510 177 aa13.3□□□□□ -0.28
THBS3-202ENST00000428962 NELFEP18615 380 aaKnown RBP13.3□□□□□ -0.28
THBS3-202ENST00000428962 PRPS1L1P21108 318 aa13.3□□□□□ -0.28
THBS3-202ENST00000428962 HSD3B2P26439 372 aa13.3□□□□□ -0.28
THBS3-202ENST00000428962 MMP12P39900 470 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms