RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 OR1D4P47884 311 aa17.54■□□□□ 0.4
UPK3BP1-201ENST00000428678 KCNK10P57789 538 aa17.54■□□□□ 0.4
UPK3BP1-201ENST00000428678 COPS2P61201 443 aa17.54■□□□□ 0.4
UPK3BP1-201ENST00000428678 Q0VFX4 171 aa17.54■□□□□ 0.4
UPK3BP1-201ENST00000428678 MFAP5Q13361 173 aa17.54■□□□□ 0.4
UPK3BP1-201ENST00000428678 GRM7Q14831 915 aa17.54■□□□□ 0.4
UPK3BP1-201ENST00000428678 ZC3H12BQ5HYM0 836 aaKnown RBP17.54■□□□□ 0.4
UPK3BP1-201ENST00000428678 C11orf63Q6NUN7 778 aa17.54■□□□□ 0.4
UPK3BP1-201ENST00000428678 PACS1Q6VY07 963 aa17.54■□□□□ 0.4
UPK3BP1-201ENST00000428678 TTC29Q8NA56 475 aaPredicted RBP17.54■□□□□ 0.4
UPK3BP1-201ENST00000428678 LINC01555Q8NAE3 123 aa17.54■□□□□ 0.4
UPK3BP1-201ENST00000428678 CRB3Q9BUF7 120 aa17.54■□□□□ 0.4
UPK3BP1-201ENST00000428678 LUC7LQ9NQ29 371 aaKnown RBP17.54■□□□□ 0.4
UPK3BP1-201ENST00000428678 INTS7Q9NVH2 962 aaKnown RBP17.54■□□□□ 0.4
UPK3BP1-201ENST00000428678 PIH1D1Q9NWS0 290 aaKnown RBP17.54■□□□□ 0.4
UPK3BP1-201ENST00000428678 HEATR9A2RTY3 570 aa17.53■□□□□ 0.4
UPK3BP1-201ENST00000428678 KLHL18O94889 574 aa17.53■□□□□ 0.4
UPK3BP1-201ENST00000428678 MAGEA1P43355 309 aa17.53■□□□□ 0.4
UPK3BP1-201ENST00000428678 RIPPLY3P57055 190 aa17.53■□□□□ 0.4
UPK3BP1-201ENST00000428678 ARG2P78540 354 aa17.53■□□□□ 0.4
UPK3BP1-201ENST00000428678 DNAJC21Q5F1R6 531 aaKnown RBP17.53■□□□□ 0.4
UPK3BP1-201ENST00000428678 TCTE1Q5JU00 501 aa17.53■□□□□ 0.4
UPK3BP1-201ENST00000428678 YOD1Q5VVQ6 348 aaPredicted RBP17.53■□□□□ 0.4
UPK3BP1-201ENST00000428678 RPUSD3Q6P087 351 aaKnown RBP17.53■□□□□ 0.4
UPK3BP1-201ENST00000428678 FIGLAQ6QHK4 219 aa17.53■□□□□ 0.4
UPK3BP1-201ENST00000428678 ARHGEF18Q6ZSZ5 1173 aa17.53■□□□□ 0.4
UPK3BP1-201ENST00000428678 VSTM4Q8IW00 320 aa17.53■□□□□ 0.4
UPK3BP1-201ENST00000428678 PRSS58Q8IYP2 241 aa17.53■□□□□ 0.4
UPK3BP1-201ENST00000428678 SLC22A18Q96BI1 424 aa17.53■□□□□ 0.4
UPK3BP1-201ENST00000428678 IL17FQ96PD4 163 aa17.53■□□□□ 0.4
UPK3BP1-201ENST00000428678 LMF1Q96S06 567 aa17.53■□□□□ 0.4
UPK3BP1-201ENST00000428678 SELENOSQ9BQE4 189 aa17.53■□□□□ 0.4
UPK3BP1-201ENST00000428678 MESP1Q9BRJ9 268 aa17.53■□□□□ 0.4
UPK3BP1-201ENST00000428678 OSBPL8Q9BZF1 889 aa17.53■□□□□ 0.4
UPK3BP1-201ENST00000428678 ZNF160Q9HCG1 818 aa17.53■□□□□ 0.4
UPK3BP1-201ENST00000428678 MAU2Q9Y6X3 613 aa17.53■□□□□ 0.4
UPK3BP1-201ENST00000428678 ACPPP15309 386 aa17.52■□□□□ 0.4
UPK3BP1-201ENST00000428678 CD9P21926 228 aa17.52■□□□□ 0.4
UPK3BP1-201ENST00000428678 GRNP28799 593 aaKnown RBP17.52■□□□□ 0.4
UPK3BP1-201ENST00000428678 SF1Q15637 639 aaKnown RBP17.52■□□□□ 0.4
UPK3BP1-201ENST00000428678 KCTD11Q693B1 232 aa17.52■□□□□ 0.4
UPK3BP1-201ENST00000428678 NLRP9Q7RTR0 991 aa17.52■□□□□ 0.4
UPK3BP1-201ENST00000428678 KLHDC8BQ8IXV7 354 aa17.52■□□□□ 0.4
UPK3BP1-201ENST00000428678 DTWD1Q8N5C7 304 aa17.52■□□□□ 0.4
UPK3BP1-201ENST00000428678 CFAP61Q8NHU2 1237 aa17.52■□□□□ 0.4
UPK3BP1-201ENST00000428678 RELTQ969Z4 430 aa17.52■□□□□ 0.4
UPK3BP1-201ENST00000428678 LRRC40Q9H9A6 602 aa17.52■□□□□ 0.4
UPK3BP1-201ENST00000428678 IL1RAPL1Q9NZN1 696 aa17.52■□□□□ 0.4
UPK3BP1-201ENST00000428678 TFR2Q9UP52 801 aa17.52■□□□□ 0.4
UPK3BP1-201ENST00000428678 EFR3BQ9Y2G0 817 aa17.52■□□□□ 0.4
UPK3BP1-201ENST00000428678 AKAP9Q99996 3911 aa17.51■□□□□ 0.39
UPK3BP1-201ENST00000428678 MTORP42345 2549 aa17.51■□□□□ 0.39
UPK3BP1-201ENST00000428678 DYTNA2CJ06 578 aa17.51■□□□□ 0.39
UPK3BP1-201ENST00000428678 CCDC162PA2VCL2 907 aa17.51■□□□□ 0.39
UPK3BP1-201ENST00000428678 MAP2K7O14733 419 aa17.51■□□□□ 0.39
UPK3BP1-201ENST00000428678 OR1I1O60431 355 aa17.51■□□□□ 0.39
UPK3BP1-201ENST00000428678 S1PR4O95977 384 aa17.51■□□□□ 0.39
UPK3BP1-201ENST00000428678 HPP00738 406 aa17.51■□□□□ 0.39
UPK3BP1-201ENST00000428678 RPN2P04844 631 aa17.51■□□□□ 0.39
UPK3BP1-201ENST00000428678 FOXN2P32314 431 aa17.51■□□□□ 0.39
UPK3BP1-201ENST00000428678 CARSP49589 748 aaKnown RBP17.51■□□□□ 0.39
UPK3BP1-201ENST00000428678 VSX2P58304 361 aaPredicted RBP17.51■□□□□ 0.39
UPK3BP1-201ENST00000428678 KLC1Q07866 573 aa17.51■□□□□ 0.39
UPK3BP1-201ENST00000428678 HSPA14Q0VDF9 509 aa17.51■□□□□ 0.39
UPK3BP1-201ENST00000428678 ART3Q13508 389 aa17.51■□□□□ 0.39
UPK3BP1-201ENST00000428678 FAM214AQ32MH5 1076 aa17.51■□□□□ 0.39
UPK3BP1-201ENST00000428678 CNGA4Q8IV77 575 aa17.51■□□□□ 0.39
UPK3BP1-201ENST00000428678 C8orf44Q96CB5 159 aa17.51■□□□□ 0.39
UPK3BP1-201ENST00000428678 TRIM56Q9BRZ2 755 aaKnown RBP17.51■□□□□ 0.39
UPK3BP1-201ENST00000428678 SUCOQ9UBS9 1254 aaKnown RBP17.51■□□□□ 0.39
UPK3BP1-201ENST00000428678 MROH6A6NGR9 719 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 VSTM2BA6NLU5 285 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 F8W8V4 182 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 PCDH17O14917 1159 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 USP1O94782 785 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 UQCRHP07919 91 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 CTNNA1P35221 906 aaKnown RBP17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 TDGF1P3P51864 188 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 OCA2Q04671 838 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 PARP6Q2NL67 630 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 ZXDCQ2QGD7 858 aaPredicted RBP17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 CCDC38Q502W7 563 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 ZNF324BQ6AW86 544 aaPredicted RBP17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 GFRALQ6UXV0 394 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 VRK3Q8IV63 474 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 DCUN1D3Q8IWE4 304 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 KBTBD2Q8IY47 623 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 SLC22A15Q8IZD6 547 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 OR2L8Q8NGY9 312 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 ITLN2Q8WWU7 325 aaPredicted RBP17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 NR4A3Q92570 626 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 MIEF2Q96C03 454 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 MENTQ9BUN1 341 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 ZNF304Q9HCX3 659 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 PLA2G3Q9NZ20 509 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 PTGFRNQ9P2B2 879 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 C3orf18Q9UK00 162 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 SLC39A10Q9ULF5 831 aa17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 KLF2Q9Y5W3 355 aaPredicted RBP17.5■□□□□ 0.39
UPK3BP1-201ENST00000428678 TRAV17A0A0B4J275 112 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms