RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 UBL7Q96S82 380 aaPredicted RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 LDAHQ9H6V9 325 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 AASDHPPTQ9NRN7 309 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 IARS2Q9NSE4 1012 aaKnown RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 GPATCH2LQ9NWQ4 482 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 ZMAT5Q9UDW3 170 aaKnown RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 TMPRSS11EQ9UL52 423 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 MFHAS1Q9Y4C4 1052 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 STON1Q9Y6Q2 735 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 RIF1Q5UIP0 2472 aaKnown RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 MLYCDO95822 493 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 PEX11BO96011 259 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 CXCL8P10145 99 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 ARF4P18085 180 aaPredicted RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 CD72P21854 359 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 HNF4AP41235 474 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 FOXA1P55317 472 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 PITX1P78337 314 aaPredicted RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 SCN1BQ07699 218 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 DGCR6Q14129 220 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 TATDN3Q17R31 274 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 HABP4Q5JVS0 413 aaKnown RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 COLEC12Q5KU26 742 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 ANKRD34AQ69YU3 496 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 SPESP1Q6UW49 350 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 TRILQ7L0X0 811 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 BHLHA9Q7RTU4 235 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 B3GNT8Q7Z7M8 397 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 SLC41A1Q8IVJ1 513 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 LINC01465Q8N7H1 131 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 UBE2FQ969M7 185 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 SLC2A13Q96QE2 648 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 RHNO1Q9BSD3 238 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 ZBED2Q9BTP6 218 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 GKN1Q9NS71 199 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 SPASTQ9UBP0 616 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 DERAQ9Y315 318 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 FAM25EA8MYX2 175 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 KERAO60938 352 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 RRAS2P62070 204 aaPredicted RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 CAMK2GQ13555 558 aaPredicted RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 PON2Q15165 354 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 SMU1Q2TAY7 513 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 TOR2AQ5JU69 321 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 FAM126BQ8IXS8 530 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 GIMAP5Q96F15 307 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 C2orf49Q9BVC5 232 aaPredicted RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 TFB2MQ9H5Q4 396 aaKnown RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 CNOT2Q9NZN8 540 aaKnown RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 FKBP7Q9Y680 259 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 COL6A6A6NMZ7 2263 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 ASB14A6NK59 587 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 LDB2O43679 373 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 CREG1O75629 220 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 ICAM2P13598 275 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 HOXB1P14653 301 aaPredicted RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 GLULP15104 373 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 HTR2BP41595 481 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 CXCR3P49682 368 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 RAG2P55895 527 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 PIGFQ07326 219 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 MICAQ29983 383 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 ZNF789Q5FWF6 425 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 ATF7IP2Q5U623 682 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 BSPRYQ5W0U4 402 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 OR6B2Q6IFH4 312 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 TMEM107Q6UX40 140 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 CATSPERGQ6ZRH7 1159 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 PLD3Q8IV08 490 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 RAVER1Q8IY67 606 aaKnown RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 ZBED3Q96IU2 234 aaPredicted RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 HYLS1Q96M11 299 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 TEX13BQ9BXU2 312 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 RPF1Q9H9Y2 349 aaKnown RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 CYP4F12Q9HCS2 524 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 OLA1Q9NTK5 396 aaKnown RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 EHD3Q9NZN3 535 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 FBXO9Q9UK97 447 aaPredicted RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 VPS4AQ9UN37 437 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 V9GYH0 126 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 A0A1B0GVM2 712 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 NOS1APO75052 506 aaPredicted RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 SIX3O95343 332 aaPredicted RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 WDPCPO95876 746 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 HOXD4P09016 255 aaPredicted RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 PAMP19021 973 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 PTX3P26022 381 aaPredicted RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 FMO4P31512 558 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 ABRQ12979 859 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 SMN1Q16637 294 aaKnown RBP5.02□□□□□ -1.61
RIF1-203ENST00000428287 ARHGAP36Q6ZRI8 547 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 SERPINA11Q86U17 422 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 VWA5B2Q8N398 1253 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 CARNMT1Q8N4J0 409 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 CLDN22Q8N7P3 220 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 UBA3Q8TBC4 463 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 KCTD13Q8WZ19 329 aa5.02□□□□□ -1.61
RIF1-203ENST00000428287 KLHL6Q8WZ60 621 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms