RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 PADI2Q9Y2J8 665 aa17.69■□□□□ 0.42
PSPC1-202ENST00000427943 FAM237BA0A1B0GVD1 139 aa17.68■□□□□ 0.42
PSPC1-202ENST00000427943 E5RI56 91 aa17.68■□□□□ 0.42
PSPC1-202ENST00000427943 H3BMM5 538 aa17.68■□□□□ 0.42
PSPC1-202ENST00000427943 ZNF185O15231 689 aa17.68■□□□□ 0.42
PSPC1-202ENST00000427943 MLNP12872 115 aa17.68■□□□□ 0.42
PSPC1-202ENST00000427943 PKMP14618 531 aaKnown RBP17.68■□□□□ 0.42
PSPC1-202ENST00000427943 CHRM3P20309 590 aa17.68■□□□□ 0.42
PSPC1-202ENST00000427943 GBX1Q14549 363 aa17.68■□□□□ 0.42
PSPC1-202ENST00000427943 IGFBP7Q16270 282 aa17.68■□□□□ 0.42
PSPC1-202ENST00000427943 TLDC1Q6P9B6 456 aa17.68■□□□□ 0.42
PSPC1-202ENST00000427943 FIGLAQ6QHK4 219 aa17.68■□□□□ 0.42
PSPC1-202ENST00000427943 DENND6AQ8IWF6 608 aa17.68■□□□□ 0.42
PSPC1-202ENST00000427943 AGGF1Q8N302 714 aaeCLIP17.68■□□□□ 0.42
PSPC1-202ENST00000427943 ZBTB2Q8N680 514 aa17.68■□□□□ 0.42
PSPC1-202ENST00000427943 MCUQ8NE86 351 aa17.68■□□□□ 0.42
PSPC1-202ENST00000427943 PROKR1Q8TCW9 393 aa17.68■□□□□ 0.42
PSPC1-202ENST00000427943 MIPEPQ99797 713 aa17.68■□□□□ 0.42
PSPC1-202ENST00000427943 DHRS4Q9BTZ2 278 aa17.68■□□□□ 0.42
PSPC1-202ENST00000427943 KCNF1Q9H3M0 494 aa17.68■□□□□ 0.42
PSPC1-202ENST00000427943 XAB2Q9HCS7 855 aaKnown RBP17.68■□□□□ 0.42
PSPC1-202ENST00000427943 FBXO6Q9NRD1 293 aaPredicted RBP17.68■□□□□ 0.42
PSPC1-202ENST00000427943 INTS7Q9NVH2 962 aaKnown RBP17.68■□□□□ 0.42
PSPC1-202ENST00000427943 TRMT1Q9NXH9 659 aaKnown RBP17.68■□□□□ 0.42
PSPC1-202ENST00000427943 IFT80Q9P2H3 777 aaPredicted RBP17.68■□□□□ 0.42
PSPC1-202ENST00000427943 NDOR1Q9UHB4 597 aa17.68■□□□□ 0.42
PSPC1-202ENST00000427943 FLNBO75369 2602 aaKnown RBP17.68■□□□□ 0.42
PSPC1-202ENST00000427943 SPENQ96T58 3664 aaKnown RBP17.67■□□□□ 0.42
PSPC1-202ENST00000427943 NBASA2RRP1 2371 aa17.67■□□□□ 0.42
PSPC1-202ENST00000427943 ZCWPW2A0A1B0GU75 182 aa17.67■□□□□ 0.42
PSPC1-202ENST00000427943 CTAGE9A4FU28 777 aa17.67■□□□□ 0.42
PSPC1-202ENST00000427943 SDR42E2A6NKP2 422 aa17.67■□□□□ 0.42
PSPC1-202ENST00000427943 PRICKLE3O43900 615 aaPredicted RBP17.67■□□□□ 0.42
PSPC1-202ENST00000427943 KIF5CO60282 957 aa17.67■□□□□ 0.42
PSPC1-202ENST00000427943 NRP2O60462 931 aa17.67■□□□□ 0.42
PSPC1-202ENST00000427943 CNOT3O75175 753 aaKnown RBP17.67■□□□□ 0.42
PSPC1-202ENST00000427943 KLF7O75840 302 aaPredicted RBP17.67■□□□□ 0.42
PSPC1-202ENST00000427943 MCM3P25205 808 aa17.67■□□□□ 0.42
PSPC1-202ENST00000427943 CCNFP41002 786 aa17.67■□□□□ 0.42
PSPC1-202ENST00000427943 PGDP52209 483 aa17.67■□□□□ 0.42
PSPC1-202ENST00000427943 ADARP55265 1226 aaKnown RBP17.67■□□□□ 0.42
PSPC1-202ENST00000427943 DCDP81605 110 aaKnown RBP17.67■□□□□ 0.42
PSPC1-202ENST00000427943 CTBP1Q13363 440 aa17.67■□□□□ 0.42
PSPC1-202ENST00000427943 THOC5Q13769 683 aaKnown RBP17.67■□□□□ 0.42
PSPC1-202ENST00000427943 FASTKQ14296 549 aaKnown RBP17.67■□□□□ 0.42
PSPC1-202ENST00000427943 ACSBG2Q5FVE4 666 aa17.67■□□□□ 0.42
PSPC1-202ENST00000427943 RAB43Q86YS6 212 aa17.67■□□□□ 0.42
PSPC1-202ENST00000427943 MCATQ8IVS2 390 aaKnown RBP17.67■□□□□ 0.42
PSPC1-202ENST00000427943 TMEM151BQ8IW70 566 aa17.67■□□□□ 0.42
PSPC1-202ENST00000427943 RAB42Q8N4Z0 105 aa17.67■□□□□ 0.42
PSPC1-202ENST00000427943 ACTRT1Q8TDG2 376 aa17.67■□□□□ 0.42
PSPC1-202ENST00000427943 SLC30A3Q99726 388 aa17.67■□□□□ 0.42
PSPC1-202ENST00000427943 C17orf62Q9BQA9 187 aa17.67■□□□□ 0.42
PSPC1-202ENST00000427943 INTS10Q9NVR2 710 aaKnown RBP17.67■□□□□ 0.42
PSPC1-202ENST00000427943 SNX12Q9UMY4 172 aa17.67■□□□□ 0.42
PSPC1-202ENST00000427943 PTRH2Q9Y3E5 179 aaKnown RBP17.67■□□□□ 0.42
PSPC1-202ENST00000427943 MRFAP1Q9Y605 127 aa17.67■□□□□ 0.42
PSPC1-202ENST00000427943 MAD1L1Q9Y6D9 718 aa17.67■□□□□ 0.42
PSPC1-202ENST00000427943 GOLGA6L10A0A0M3HER8 536 aa17.66■□□□□ 0.42
PSPC1-202ENST00000427943 ARHGEF33A8MVX0 844 aa17.66■□□□□ 0.42
PSPC1-202ENST00000427943 ZSCAN12O43309 604 aa17.66■□□□□ 0.42
PSPC1-202ENST00000427943 USP1O94782 785 aa17.66■□□□□ 0.42
PSPC1-202ENST00000427943 MATN4O95460 622 aa17.66■□□□□ 0.42
PSPC1-202ENST00000427943 ALAS2P22557 587 aa17.66■□□□□ 0.42
PSPC1-202ENST00000427943 ATP5DP30049 168 aa17.66■□□□□ 0.42
PSPC1-202ENST00000427943 FOLR3P41439 243 aa17.66■□□□□ 0.42
PSPC1-202ENST00000427943 SLC1A2P43004 574 aa17.66■□□□□ 0.42
PSPC1-202ENST00000427943 MAGEA3P43357 314 aa17.66■□□□□ 0.42
PSPC1-202ENST00000427943 FNTAP49354 379 aa17.66■□□□□ 0.42
PSPC1-202ENST00000427943 FOXK1P85037 733 aa17.66■□□□□ 0.42
PSPC1-202ENST00000427943 KLHL38Q2WGJ6 581 aa17.66■□□□□ 0.42
PSPC1-202ENST00000427943 NKAIN1Q4KMZ8 207 aa17.66■□□□□ 0.42
PSPC1-202ENST00000427943 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.66■□□□□ 0.42
PSPC1-202ENST00000427943 ARMC3Q5W041 872 aa17.66■□□□□ 0.42
PSPC1-202ENST00000427943 TTLL10Q6ZVT0 673 aa17.66■□□□□ 0.42
PSPC1-202ENST00000427943 MRGPREQ86SM8 312 aa17.66■□□□□ 0.42
PSPC1-202ENST00000427943 NAT8LQ8N9F0 302 aa17.66■□□□□ 0.42
PSPC1-202ENST00000427943 GRK7Q8WTQ7 553 aa17.66■□□□□ 0.42
PSPC1-202ENST00000427943 SPATA7Q9P0W8 599 aa17.66■□□□□ 0.42
PSPC1-202ENST00000427943 PCDHGA9Q9Y5G4 932 aaKnown RBP17.66■□□□□ 0.42
PSPC1-202ENST00000427943 A0A1W2PPV9 198 aa17.65■□□□□ 0.42
PSPC1-202ENST00000427943 A6NL46 340 aa17.65■□□□□ 0.42
PSPC1-202ENST00000427943 CTSVO60911 334 aa17.65■□□□□ 0.42
PSPC1-202ENST00000427943 GCGRP47871 477 aa17.65■□□□□ 0.42
PSPC1-202ENST00000427943 YBX1P67809 324 aaKnown RBP17.65■□□□□ 0.42
PSPC1-202ENST00000427943 CUL1Q13616 776 aa17.65■□□□□ 0.42
PSPC1-202ENST00000427943 PPP1R7Q15435 360 aa17.65■□□□□ 0.42
PSPC1-202ENST00000427943 ZC3H12BQ5HYM0 836 aaKnown RBP17.65■□□□□ 0.42
PSPC1-202ENST00000427943 FDCSPQ8NFU4 85 aa17.65■□□□□ 0.42
PSPC1-202ENST00000427943 OR2L3Q8NG85 312 aa17.65■□□□□ 0.42
PSPC1-202ENST00000427943 GIMAP7Q8NHV1 300 aa17.65■□□□□ 0.42
PSPC1-202ENST00000427943 HMGCLL1Q8TB92 370 aa17.65■□□□□ 0.42
PSPC1-202ENST00000427943 MAGEC3Q8TD91 643 aa17.65■□□□□ 0.42
PSPC1-202ENST00000427943 DLG3Q92796 817 aa17.65■□□□□ 0.42
PSPC1-202ENST00000427943 NUDT9Q9BW91 350 aa17.65■□□□□ 0.42
PSPC1-202ENST00000427943 ACAT2Q9BWD1 397 aa17.65■□□□□ 0.42
PSPC1-202ENST00000427943 SLC22A11Q9NSA0 550 aa17.65■□□□□ 0.42
PSPC1-202ENST00000427943 C20orf96Q9NUD7 363 aaPredicted RBP17.65■□□□□ 0.42
PSPC1-202ENST00000427943 VPS9D1Q9Y2B5 631 aa17.65■□□□□ 0.42
PSPC1-202ENST00000427943 A0A1B0GX78 115 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms